RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 H0Y9J4 135 aa3.45□□□□□ -1.86
CLSTN3-215ENST00000544584 BCE1O60756 84 aa3.45□□□□□ -1.86
CLSTN3-215ENST00000544584 DPM2O94777 84 aa3.45□□□□□ -1.86
CLSTN3-215ENST00000544584 LCE2AQ5TA79 106 aaPredicted RBP3.45□□□□□ -1.86
CLSTN3-215ENST00000544584 YPEL4Q96NS1 127 aa3.45□□□□□ -1.86
CLSTN3-215ENST00000544584 MIEN1Q9BRT3 115 aa3.45□□□□□ -1.86
CLSTN3-215ENST00000544584 IGLV5-37A0A075B6J1 123 aa3.44□□□□□ -1.86
CLSTN3-215ENST00000544584 A0A096LNJ9 63 aa3.44□□□□□ -1.86
CLSTN3-215ENST00000544584 TMEM223A0PJW6 202 aa3.44□□□□□ -1.86
CLSTN3-215ENST00000544584 C20orf202A1L168 122 aa3.44□□□□□ -1.86
CLSTN3-215ENST00000544584 SERF1AO75920 110 aa3.44□□□□□ -1.86
CLSTN3-215ENST00000544584 IGKCP01834 107 aa3.44□□□□□ -1.86
CLSTN3-215ENST00000544584 LGALS3P17931 250 aaKnown RBP3.44□□□□□ -1.86
CLSTN3-215ENST00000544584 SLC7A5P1Q8MH63 180 aa3.44□□□□□ -1.86
CLSTN3-215ENST00000544584 FAM19A2Q8N3H0 131 aa3.44□□□□□ -1.86
CLSTN3-215ENST00000544584 COPS9Q8WXC6 57 aa3.44□□□□□ -1.86
CLSTN3-215ENST00000544584 NDUFA12Q9UI09 145 aa3.44□□□□□ -1.86
CLSTN3-215ENST00000544584 IGKV2D-26A0A0A0MRZ7 120 aa3.43□□□□□ -1.86
CLSTN3-215ENST00000544584 A0A0U1RQV1 116 aa3.43□□□□□ -1.86
CLSTN3-215ENST00000544584 LEPROTO15243 131 aa3.43□□□□□ -1.86
CLSTN3-215ENST00000544584 FABP4P15090 132 aa3.43□□□□□ -1.86
CLSTN3-215ENST00000544584 URB1-AS1Q96HZ7 61 aa3.43□□□□□ -1.86
CLSTN3-215ENST00000544584 ZNF625Q96I27 306 aaPredicted RBP3.43□□□□□ -1.86
CLSTN3-215ENST00000544584 LINC00167Q96N53 147 aa3.43□□□□□ -1.86
CLSTN3-215ENST00000544584 SND1-IT1Q9HBX3 110 aa3.43□□□□□ -1.86
CLSTN3-215ENST00000544584 GAGE10A6NGK3 116 aa3.42□□□□□ -1.86
CLSTN3-215ENST00000544584 RPL37AP8A6NKH3 93 aa3.42□□□□□ -1.86
CLSTN3-215ENST00000544584 COLCA2A8K830 154 aa3.42□□□□□ -1.86
CLSTN3-215ENST00000544584 J3QQQ9 107 aa3.42□□□□□ -1.86
CLSTN3-215ENST00000544584 M0R378 163 aa3.42□□□□□ -1.86
CLSTN3-215ENST00000544584 CRYGAP11844 174 aa3.42□□□□□ -1.86
CLSTN3-215ENST00000544584 HINT1P49773 126 aaPredicted RBP3.42□□□□□ -1.86
CLSTN3-215ENST00000544584 ZNF706Q9Y5V0 76 aaPredicted RBP3.42□□□□□ -1.86
CLSTN3-215ENST00000544584 IGKV2-28A0A075B6P5 120 aa3.41□□□□□ -1.86
CLSTN3-215ENST00000544584 IGKV2D-28P01615 120 aa3.41□□□□□ -1.86
CLSTN3-215ENST00000544584 KRTAP10-8P60410 259 aa3.41□□□□□ -1.86
CLSTN3-215ENST00000544584 CTAG1AP78358 180 aa3.41□□□□□ -1.86
CLSTN3-215ENST00000544584 PET117Q6UWS5 81 aa3.41□□□□□ -1.86
CLSTN3-215ENST00000544584 FAM19A1Q7Z5A9 133 aa3.41□□□□□ -1.86
CLSTN3-215ENST00000544584 BOD1L2Q8IYS8 172 aa3.41□□□□□ -1.86
CLSTN3-215ENST00000544584 TRBV10-2A0A0K0K1G8 114 aa3.4□□□□□ -1.87
CLSTN3-215ENST00000544584 ETDCA0A1B0GVM5 59 aa3.4□□□□□ -1.87
CLSTN3-215ENST00000544584 PRYO14603 147 aa3.4□□□□□ -1.87
CLSTN3-215ENST00000544584 SMIM13P0DJ93 91 aa3.4□□□□□ -1.87
CLSTN3-215ENST00000544584 MT1HL1P0DM35 61 aa3.4□□□□□ -1.87
CLSTN3-215ENST00000544584 VPREB1P12018 145 aa3.4□□□□□ -1.87
CLSTN3-215ENST00000544584 JOSD1Q15040 202 aaPredicted RBP3.4□□□□□ -1.87
CLSTN3-215ENST00000544584 FAM229BQ4G0N7 80 aa3.4□□□□□ -1.87
CLSTN3-215ENST00000544584 S100A7L2Q5SY68 101 aa3.4□□□□□ -1.87
CLSTN3-215ENST00000544584 MIR7-3HGQ8N6C7 128 aa3.4□□□□□ -1.87
CLSTN3-215ENST00000544584 A0A0U1RRA0 63 aa3.39□□□□□ -1.87
CLSTN3-215ENST00000544584 SYS1-DBNDD2H3BUS1 97 aa3.39□□□□□ -1.87
CLSTN3-215ENST00000544584 HIST1H2BKO60814 126 aa3.39□□□□□ -1.87
CLSTN3-215ENST00000544584 HIST1H2BJP06899 126 aa3.39□□□□□ -1.87
CLSTN3-215ENST00000544584 HIST1H2BOP23527 126 aa3.39□□□□□ -1.87
CLSTN3-215ENST00000544584 HIST1H2BBP33778 126 aa3.39□□□□□ -1.87
CLSTN3-215ENST00000544584 HIST1H2BDP58876 126 aa3.39□□□□□ -1.87
CLSTN3-215ENST00000544584 SNRPEP62304 92 aaKnown RBP3.39□□□□□ -1.87
CLSTN3-215ENST00000544584 HIST1H2BCP62807 126 aa3.39□□□□□ -1.87
CLSTN3-215ENST00000544584 HIST2H2BEQ16778 126 aa3.39□□□□□ -1.87
CLSTN3-215ENST00000544584 C4orf48Q5BLP8 95 aa3.39□□□□□ -1.87
CLSTN3-215ENST00000544584 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.39□□□□□ -1.87
CLSTN3-215ENST00000544584 KRTAP7-1Q8IUC3 87 aa3.39□□□□□ -1.87
CLSTN3-215ENST00000544584 TYMSOSQ8TAI1 123 aa3.39□□□□□ -1.87
CLSTN3-215ENST00000544584 HIST1H2BHQ93079 126 aa3.39□□□□□ -1.87
CLSTN3-215ENST00000544584 HIST1H2BNQ99877 126 aa3.39□□□□□ -1.87
CLSTN3-215ENST00000544584 HIST1H2BMQ99879 126 aa3.39□□□□□ -1.87
CLSTN3-215ENST00000544584 TMEM126AQ9H061 195 aa3.39□□□□□ -1.87
CLSTN3-215ENST00000544584 SPANXB1Q9NS25 103 aaPredicted RBP3.39□□□□□ -1.87
CLSTN3-215ENST00000544584 LOC107984156A0A0G2JMH3 177 aa3.38□□□□□ -1.87
CLSTN3-215ENST00000544584 HSBP1L1C9JCN9 74 aa3.38□□□□□ -1.87
CLSTN3-215ENST00000544584 E9PLD3 99 aa3.38□□□□□ -1.87
CLSTN3-215ENST00000544584 NDUFC2O95298 119 aa3.38□□□□□ -1.87
CLSTN3-215ENST00000544584 S100A6P06703 90 aa3.38□□□□□ -1.87
CLSTN3-215ENST00000544584 S100A2P29034 98 aa3.38□□□□□ -1.87
CLSTN3-215ENST00000544584 ARL17AQ8IVW1 177 aa3.38□□□□□ -1.87
CLSTN3-215ENST00000544584 LINC00518Q8N0U6 118 aa3.38□□□□□ -1.87
CLSTN3-215ENST00000544584 PRR26Q8N8Z3 221 aa3.38□□□□□ -1.87
CLSTN3-215ENST00000544584 KCNQ1DNQ9H478 68 aa3.38□□□□□ -1.87
CLSTN3-215ENST00000544584 CRCT1Q9UGL9 99 aa3.38□□□□□ -1.87
CLSTN3-215ENST00000544584 TMEM238C9JI98 176 aa3.37□□□□□ -1.87
CLSTN3-215ENST00000544584 TIMM17BO60830 172 aa3.37□□□□□ -1.87
CLSTN3-215ENST00000544584 DDTP30046 118 aa3.37□□□□□ -1.87
CLSTN3-215ENST00000544584 LINC01545Q5VT33 79 aa3.37□□□□□ -1.87
CLSTN3-215ENST00000544584 SPAG11AQ6PDA7 123 aa3.37□□□□□ -1.87
CLSTN3-215ENST00000544584 SLC25A34Q6PIV7 304 aa3.37□□□□□ -1.87
CLSTN3-215ENST00000544584 SCGB1D4Q6XE38 83 aa3.37□□□□□ -1.87
CLSTN3-215ENST00000544584 Q6ZVH6 145 aa3.37□□□□□ -1.87
CLSTN3-215ENST00000544584 LINC00337Q8N6G1 96 aa3.37□□□□□ -1.87
CLSTN3-215ENST00000544584 HIGD2AQ9BW72 106 aa3.37□□□□□ -1.87
CLSTN3-215ENST00000544584 ZNF815PA8K554 130 aa3.36□□□□□ -1.87
CLSTN3-215ENST00000544584 NCR3O14931 201 aa3.36□□□□□ -1.87
CLSTN3-215ENST00000544584 KRTDAPP60985 99 aa3.36□□□□□ -1.87
CLSTN3-215ENST00000544584 COA6Q5JTJ3 125 aaKnown RBP3.36□□□□□ -1.87
CLSTN3-215ENST00000544584 KRTAP11-1Q8IUC1 163 aa3.36□□□□□ -1.87
CLSTN3-215ENST00000544584 PMCHL2Q9BQD1 86 aa3.36□□□□□ -1.87
CLSTN3-215ENST00000544584 SPANXCQ9NY87 97 aa3.36□□□□□ -1.87
CLSTN3-215ENST00000544584 A0A0J9YXY3 114 aa3.35□□□□□ -1.87
CLSTN3-215ENST00000544584 C5orf52A6NGY3 159 aa3.35□□□□□ -1.87
CLSTN3-215ENST00000544584 SCO1O75880 301 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms