RNA–Protein interactions for RNA: ENST00000544513.1

SEMA4D-224, Transcript of semaphorin 4D, humanhuman

TSL 5

Gene SEMA4D, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-224ENST00000544513 M0R378 163 aa7.99□□□□□ -1.13
SEMA4D-224ENST00000544513 COX17Q14061 63 aa7.99□□□□□ -1.13
SEMA4D-224ENST00000544513 Q8NDZ9 215 aa7.99□□□□□ -1.13
SEMA4D-224ENST00000544513 PLEKHB2Q96CS7 222 aa7.99□□□□□ -1.13
SEMA4D-224ENST00000544513 IGLV7-46A0A075B6I9 117 aa7.98□□□□□ -1.13
SEMA4D-224ENST00000544513 A0A096LNJ9 63 aa7.98□□□□□ -1.13
SEMA4D-224ENST00000544513 FA2HQ7L5A8 372 aa7.98□□□□□ -1.13
SEMA4D-224ENST00000544513 FAM19A1Q7Z5A9 133 aa7.98□□□□□ -1.13
SEMA4D-224ENST00000544513 ERG28Q9UKR5 140 aa7.98□□□□□ -1.13
SEMA4D-224ENST00000544513 ZNF22P17026 224 aaPredicted RBP7.97□□□□□ -1.13
SEMA4D-224ENST00000544513 RPL24P83731 157 aaKnown RBP7.97□□□□□ -1.13
SEMA4D-224ENST00000544513 CDIP1Q9H305 208 aa7.97□□□□□ -1.13
SEMA4D-224ENST00000544513 C3orf22Q8N5N4 141 aa7.95□□□□□ -1.14
SEMA4D-224ENST00000544513 URB1-AS1Q96HZ7 61 aa7.95□□□□□ -1.14
SEMA4D-224ENST00000544513 C18orf32Q8TCD1 76 aa7.94□□□□□ -1.14
SEMA4D-224ENST00000544513 ZNF625Q96I27 306 aaPredicted RBP7.94□□□□□ -1.14
SEMA4D-224ENST00000544513 NDUFA6P56556 154 aa7.93□□□□□ -1.14
SEMA4D-224ENST00000544513 SFTA2Q6UW10 78 aa7.93□□□□□ -1.14
SEMA4D-224ENST00000544513 C11orf86A6NJI1 115 aa7.92□□□□□ -1.14
SEMA4D-224ENST00000544513 BAGE3Q86Y29 109 aa7.92□□□□□ -1.14
SEMA4D-224ENST00000544513 SPRR4Q96PI1 79 aa7.92□□□□□ -1.14
SEMA4D-224ENST00000544513 PPDPFQ9H3Y8 114 aa7.92□□□□□ -1.14
SEMA4D-224ENST00000544513 HIST1H2BKO60814 126 aa7.91□□□□□ -1.14
SEMA4D-224ENST00000544513 HIST1H2BJP06899 126 aa7.91□□□□□ -1.14
SEMA4D-224ENST00000544513 LINC00614P0C842 121 aa7.91□□□□□ -1.14
SEMA4D-224ENST00000544513 HIST1H2BOP23527 126 aa7.91□□□□□ -1.14
SEMA4D-224ENST00000544513 HIST1H2BBP33778 126 aa7.91□□□□□ -1.14
SEMA4D-224ENST00000544513 HIST1H2BDP58876 126 aa7.91□□□□□ -1.14
SEMA4D-224ENST00000544513 HIST1H2BCP62807 126 aa7.91□□□□□ -1.14
SEMA4D-224ENST00000544513 HIST2H2BEQ16778 126 aa7.91□□□□□ -1.14
SEMA4D-224ENST00000544513 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.91□□□□□ -1.14
SEMA4D-224ENST00000544513 SPAG11AQ6PDA7 123 aa7.91□□□□□ -1.14
SEMA4D-224ENST00000544513 HIST1H2BHQ93079 126 aa7.91□□□□□ -1.14
SEMA4D-224ENST00000544513 HIST1H2BNQ99877 126 aa7.91□□□□□ -1.14
SEMA4D-224ENST00000544513 HIST1H2BMQ99879 126 aa7.91□□□□□ -1.14
SEMA4D-224ENST00000544513 HBDP02042 147 aa7.9□□□□□ -1.14
SEMA4D-224ENST00000544513 CHCHD1Q96BP2 118 aaKnown RBP7.9□□□□□ -1.14
SEMA4D-224ENST00000544513 HIGD2AQ9BW72 106 aa7.9□□□□□ -1.14
SEMA4D-224ENST00000544513 PMCHL1Q16048 86 aa7.89□□□□□ -1.15
SEMA4D-224ENST00000544513 FP248Q71RG6 208 aaPredicted RBP7.89□□□□□ -1.15
SEMA4D-224ENST00000544513 TMEM170BQ5T4T1 132 aa7.88□□□□□ -1.15
SEMA4D-224ENST00000544513 HSBP1O75506 76 aa7.87□□□□□ -1.15
SEMA4D-224ENST00000544513 LINC00158P58513 81 aa7.87□□□□□ -1.15
SEMA4D-224ENST00000544513 SERF1AO75920 110 aa7.86□□□□□ -1.15
SEMA4D-224ENST00000544513 SPRR1AP35321 89 aa7.86□□□□□ -1.15
SEMA4D-224ENST00000544513 KRTAP13-3Q3SY46 172 aa7.86□□□□□ -1.15
SEMA4D-224ENST00000544513 KCNQ1DNQ9H478 68 aa7.86□□□□□ -1.15
SEMA4D-224ENST00000544513 ZNF706Q9Y5V0 76 aaPredicted RBP7.86□□□□□ -1.15
SEMA4D-224ENST00000544513 KRTAP9-6A0A140TA67 174 aa7.85□□□□□ -1.15
SEMA4D-224ENST00000544513 TMEM223A0PJW6 202 aa7.85□□□□□ -1.15
SEMA4D-224ENST00000544513 KRTAP4-16G5E9R7 235 aaPredicted RBP7.85□□□□□ -1.15
SEMA4D-224ENST00000544513 PRYO14603 147 aa7.85□□□□□ -1.15
SEMA4D-224ENST00000544513 S100A6P06703 90 aa7.85□□□□□ -1.15
SEMA4D-224ENST00000544513 LINC00337Q8N6G1 96 aa7.85□□□□□ -1.15
SEMA4D-224ENST00000544513 Q8NBF4 154 aa7.84□□□□□ -1.15
SEMA4D-224ENST00000544513 CHTOPQ9Y3Y2 248 aaKnown RBP7.84□□□□□ -1.15
SEMA4D-224ENST00000544513 A0A0U1RRA0 63 aa7.83□□□□□ -1.16
SEMA4D-224ENST00000544513 SMIM13P0DJ93 91 aa7.83□□□□□ -1.16
SEMA4D-224ENST00000544513 ASB16-AS1Q495Z4 193 aa7.83□□□□□ -1.16
SEMA4D-224ENST00000544513 LINC00483Q53H64 154 aa7.83□□□□□ -1.16
SEMA4D-224ENST00000544513 C4orf48Q5BLP8 95 aa7.83□□□□□ -1.16
SEMA4D-224ENST00000544513 COA6Q5JTJ3 125 aaKnown RBP7.83□□□□□ -1.16
SEMA4D-224ENST00000544513 TRAV12-1A0A0B4J245 112 aa7.82□□□□□ -1.16
SEMA4D-224ENST00000544513 BOD1L2Q8IYS8 172 aa7.82□□□□□ -1.16
SEMA4D-224ENST00000544513 DAND5Q8N907 189 aa7.82□□□□□ -1.16
SEMA4D-224ENST00000544513 SMCR5Q8TEV8 140 aa7.82□□□□□ -1.16
SEMA4D-224ENST00000544513 SPINK1P00995 79 aa7.81□□□□□ -1.16
SEMA4D-224ENST00000544513 LINC00310P59036 64 aa7.81□□□□□ -1.16
SEMA4D-224ENST00000544513 FAM19A2Q8N3H0 131 aa7.8□□□□□ -1.16
SEMA4D-224ENST00000544513 MIR7-3HGQ8N6C7 128 aa7.8□□□□□ -1.16
SEMA4D-224ENST00000544513 TRBV10-3A0A0K0K1G6 114 aa7.79□□□□□ -1.16
SEMA4D-224ENST00000544513 NCR3O14931 201 aa7.79□□□□□ -1.16
SEMA4D-224ENST00000544513 LEPROTL1O95214 131 aa7.79□□□□□ -1.16
SEMA4D-224ENST00000544513 KRTAP4-1Q9BYQ7 146 aa7.79□□□□□ -1.16
SEMA4D-224ENST00000544513 HSPB8Q9UJY1 196 aa7.79□□□□□ -1.16
SEMA4D-224ENST00000544513 ETDCA0A1B0GVM5 59 aa7.78□□□□□ -1.16
SEMA4D-224ENST00000544513 S100A2P29034 98 aa7.78□□□□□ -1.16
SEMA4D-224ENST00000544513 HERV-K104P63124 156 aa7.78□□□□□ -1.16
SEMA4D-224ENST00000544513 IFI27L1Q96BM0 104 aa7.78□□□□□ -1.16
SEMA4D-224ENST00000544513 TMA7Q9Y2S6 64 aaKnown RBP7.78□□□□□ -1.16
SEMA4D-224ENST00000544513 LOC107984156A0A0G2JMH3 177 aa7.77□□□□□ -1.17
SEMA4D-224ENST00000544513 B5MCH6 92 aa7.77□□□□□ -1.17
SEMA4D-224ENST00000544513 RPS29P62273 56 aaKnown RBP7.77□□□□□ -1.17
SEMA4D-224ENST00000544513 ARL17AQ8IVW1 177 aa7.77□□□□□ -1.17
SEMA4D-224ENST00000544513 LINC00587B1AMM8 73 aa7.76□□□□□ -1.17
SEMA4D-224ENST00000544513 ERC2-IT1O76042 136 aa7.76□□□□□ -1.17
SEMA4D-224ENST00000544513 FABP4P15090 132 aa7.76□□□□□ -1.17
SEMA4D-224ENST00000544513 SNRPEP62304 92 aaKnown RBP7.76□□□□□ -1.17
SEMA4D-224ENST00000544513 MEIG1Q5JSS6 88 aa7.76□□□□□ -1.17
SEMA4D-224ENST00000544513 NDUFA12Q9UI09 145 aa7.76□□□□□ -1.17
SEMA4D-224ENST00000544513 GAGE2AQ6NT46 116 aa7.75□□□□□ -1.17
SEMA4D-224ENST00000544513 HIST3H2BBQ8N257 126 aa7.75□□□□□ -1.17
SEMA4D-224ENST00000544513 Q8N377 158 aa7.75□□□□□ -1.17
SEMA4D-224ENST00000544513 MYMXA0A1B0GTQ4 84 aa7.74□□□□□ -1.17
SEMA4D-224ENST00000544513 C5orf52A6NGY3 159 aa7.74□□□□□ -1.17
SEMA4D-224ENST00000544513 SEC61BP60468 96 aaKnown RBP7.74□□□□□ -1.17
SEMA4D-224ENST00000544513 SSBP3-AS1Q7Z2R9 100 aa7.74□□□□□ -1.17
SEMA4D-224ENST00000544513 Q9BRP9 147 aa7.74□□□□□ -1.17
SEMA4D-224ENST00000544513 MAP1LC3CQ9BXW4 147 aa7.74□□□□□ -1.17
SEMA4D-224ENST00000544513 TRBV10-2A0A0K0K1G8 114 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms