RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 LOC101927531A0A1B0GV80 90 aa7.23□□□□□ -1.25
PCDH9-204ENST00000544246 ELOF1P60002 83 aaKnown RBP7.23□□□□□ -1.25
PCDH9-204ENST00000544246 LINC01600Q96MT4 127 aa7.22□□□□□ -1.25
PCDH9-204ENST00000544246 LINC00476Q8WZB0 136 aa7.22□□□□□ -1.25
PCDH9-204ENST00000544246 FREM1Q5H8C1 2179 aa7.22□□□□□ -1.25
PCDH9-204ENST00000544246 MED12LQ86YW9 2145 aa7.22□□□□□ -1.25
PCDH9-204ENST00000544246 KIF25-AS1Q9Y6Z4 181 aa7.22□□□□□ -1.25
PCDH9-204ENST00000544246 A0A096LNJ9 63 aa7.22□□□□□ -1.25
PCDH9-204ENST00000544246 FHL3Q13643 280 aa7.22□□□□□ -1.25
PCDH9-204ENST00000544246 IGLV5-39A0A0G2JS06 123 aa7.21□□□□□ -1.25
PCDH9-204ENST00000544246 LOC110117498A0A087WWA1 95 aa7.21□□□□□ -1.26
PCDH9-204ENST00000544246 ATG2AQ2TAZ0 1938 aa7.21□□□□□ -1.26
PCDH9-204ENST00000544246 Q6ZQT0 140 aa7.21□□□□□ -1.26
PCDH9-204ENST00000544246 KIAA1549Q9HCM3 1950 aa7.2□□□□□ -1.26
PCDH9-204ENST00000544246 RPL37AP61513 92 aaKnown RBP7.19□□□□□ -1.26
PCDH9-204ENST00000544246 PTPRBP23467 1997 aa7.19□□□□□ -1.26
PCDH9-204ENST00000544246 NUP210LQ5VU65 1888 aa7.19□□□□□ -1.26
PCDH9-204ENST00000544246 UQCR11O14957 56 aa7.19□□□□□ -1.26
PCDH9-204ENST00000544246 PHF5AQ7RTV0 110 aaKnown RBP7.19□□□□□ -1.26
PCDH9-204ENST00000544246 ZFYVE26Q68DK2 2539 aa7.19□□□□□ -1.26
PCDH9-204ENST00000544246 EPM2AB3EWF7 344 aa7.19□□□□□ -1.26
PCDH9-204ENST00000544246 CYP4F30PQ9H0H9 118 aa7.19□□□□□ -1.26
PCDH9-204ENST00000544246 CENPFP49454 3210 aa7.18□□□□□ -1.26
PCDH9-204ENST00000544246 Q6ZRP5 223 aa7.18□□□□□ -1.26
PCDH9-204ENST00000544246 Q6ZRX8 168 aa7.18□□□□□ -1.26
PCDH9-204ENST00000544246 COA5Q86WW8 74 aa7.18□□□□□ -1.26
PCDH9-204ENST00000544246 TM2D3Q9BRN9 247 aa7.17□□□□□ -1.26
PCDH9-204ENST00000544246 RTL8CO15255 209 aa7.17□□□□□ -1.26
PCDH9-204ENST00000544246 COL4A2P08572 1712 aa7.17□□□□□ -1.26
PCDH9-204ENST00000544246 COX6B2Q6YFQ2 88 aa7.17□□□□□ -1.26
PCDH9-204ENST00000544246 ABCA2Q9BZC7 2435 aa7.17□□□□□ -1.26
PCDH9-204ENST00000544246 CHTF8P0CG12 524 aa7.16□□□□□ -1.26
PCDH9-204ENST00000544246 LINC01546A6NGU7 62 aa7.15□□□□□ -1.26
PCDH9-204ENST00000544246 FAM218AQ96MZ4 157 aa7.15□□□□□ -1.26
PCDH9-204ENST00000544246 MIR22HGQ0VDD5 57 aa7.15□□□□□ -1.26
PCDH9-204ENST00000544246 LRRK2Q5S007 2527 aa7.15□□□□□ -1.27
PCDH9-204ENST00000544246 PKD1L2Q7Z442 2459 aa7.15□□□□□ -1.27
PCDH9-204ENST00000544246 WDR87Q6ZQQ6 2873 aa7.15□□□□□ -1.27
PCDH9-204ENST00000544246 IGHV3OR16-9A0A0B4J2B5 98 aa7.14□□□□□ -1.27
PCDH9-204ENST00000544246 SHANK1Q9Y566 2161 aa7.14□□□□□ -1.27
PCDH9-204ENST00000544246 A8MWP4 228 aa7.14□□□□□ -1.27
PCDH9-204ENST00000544246 MRPL34Q9BQ48 92 aaKnown RBP7.14□□□□□ -1.27
PCDH9-204ENST00000544246 A8MUN3 132 aa7.13□□□□□ -1.27
PCDH9-204ENST00000544246 ST20-AS1Q8NBB2 130 aa7.13□□□□□ -1.27
PCDH9-204ENST00000544246 FAM19A4Q96LR4 140 aa7.13□□□□□ -1.27
PCDH9-204ENST00000544246 PCNTO95613 3336 aa7.13□□□□□ -1.27
PCDH9-204ENST00000544246 C16orf90A8MZG2 172 aa7.12□□□□□ -1.27
PCDH9-204ENST00000544246 J3QL48 77 aa7.12□□□□□ -1.27
PCDH9-204ENST00000544246 JMJD1CQ15652 2540 aa7.12□□□□□ -1.27
PCDH9-204ENST00000544246 SMCPP49901 116 aaPredicted RBP7.12□□□□□ -1.27
PCDH9-204ENST00000544246 TRBV7-4A0A0J9YYF1 115 aa7.11□□□□□ -1.27
PCDH9-204ENST00000544246 H3BNG1 76 aa7.1□□□□□ -1.27
PCDH9-204ENST00000544246 LINC00315P59091 139 aa7.1□□□□□ -1.27
PCDH9-204ENST00000544246 ERC2-IT1O76042 136 aa7.1□□□□□ -1.27
PCDH9-204ENST00000544246 IGLV5-45A0A087WSX0 123 aa7.09□□□□□ -1.27
PCDH9-204ENST00000544246 C9orf129Q5T035 196 aaKnown RBP7.08□□□□□ -1.28
PCDH9-204ENST00000544246 PRR14LQ5THK1 2151 aa7.08□□□□□ -1.28
PCDH9-204ENST00000544246 FLNBO75369 2602 aaKnown RBP7.08□□□□□ -1.28
PCDH9-204ENST00000544246 K7EQZ3 153 aa7.07□□□□□ -1.28
PCDH9-204ENST00000544246 TANC2Q9HCD6 1990 aa7.07□□□□□ -1.28
PCDH9-204ENST00000544246 NBDYA0A0U1RRE5 68 aa7.07□□□□□ -1.28
PCDH9-204ENST00000544246 LINC01554Q52M75 96 aa7.07□□□□□ -1.28
PCDH9-204ENST00000544246 CD164Q04900 197 aa7.07□□□□□ -1.28
PCDH9-204ENST00000544246 CDC42SE1Q9NRR8 79 aa7.06□□□□□ -1.28
PCDH9-204ENST00000544246 A0A1W2PPR1 153 aa7.06□□□□□ -1.28
PCDH9-204ENST00000544246 PRO0461Q9UI25 63 aa7.06□□□□□ -1.28
PCDH9-204ENST00000544246 HCFC1P51610 2035 aa7.05□□□□□ -1.28
PCDH9-204ENST00000544246 IGLV6-57P01721 117 aa7.05□□□□□ -1.28
PCDH9-204ENST00000544246 DNAH12Q6ZR08 3092 aa7.05□□□□□ -1.28
PCDH9-204ENST00000544246 DSCR10P59022 87 aa7.05□□□□□ -1.28
PCDH9-204ENST00000544246 C2CD3Q4AC94 2353 aa7.05□□□□□ -1.28
PCDH9-204ENST00000544246 LUZP6Q538Z0 58 aa7.05□□□□□ -1.28
PCDH9-204ENST00000544246 LCA10Q71F78 164 aa7.05□□□□□ -1.28
PCDH9-204ENST00000544246 GVQW2A0A096LPI5 108 aaPredicted RBP7.04□□□□□ -1.28
PCDH9-204ENST00000544246 PCNX3Q9H6A9 2034 aa7.04□□□□□ -1.28
PCDH9-204ENST00000544246 KTN1-AS1Q86SY8 53 aa7.03□□□□□ -1.28
PCDH9-204ENST00000544246 WNK1Q9H4A3 2382 aa7.03□□□□□ -1.28
PCDH9-204ENST00000544246 ARHGAP32A7KAX9 2087 aa7.03□□□□□ -1.28
PCDH9-204ENST00000544246 C8orf17Q9NRJ1 99 aa7.02□□□□□ -1.29
PCDH9-204ENST00000544246 POLQO75417 2590 aa7□□□□□ -1.29
PCDH9-204ENST00000544246 ABCA12Q86UK0 2595 aa7□□□□□ -1.29
PCDH9-204ENST00000544246 C9orf92A6NGG3 77 aa7□□□□□ -1.29
PCDH9-204ENST00000544246 LINC00588Q9Y4M8 146 aa7□□□□□ -1.29
PCDH9-204ENST00000544246 IGLV5-37A0A075B6J1 123 aa7□□□□□ -1.29
PCDH9-204ENST00000544246 RAI1Q7Z5J4 1906 aaPredicted RBP7□□□□□ -1.29
PCDH9-204ENST00000544246 EXPH5Q8NEV8 1989 aa6.99□□□□□ -1.29
PCDH9-204ENST00000544246 LINC00304Q8N9R0 145 aa6.99□□□□□ -1.29
PCDH9-204ENST00000544246 OBSCN-AS1Q96MR7 158 aa6.99□□□□□ -1.29
PCDH9-204ENST00000544246 RBM12B-AS1Q9P1G2 102 aa6.99□□□□□ -1.29
PCDH9-204ENST00000544246 F8P00451 2351 aa6.99□□□□□ -1.29
PCDH9-204ENST00000544246 FAM168BA1KXE4 195 aa6.98□□□□□ -1.29
PCDH9-204ENST00000544246 A0A0D9SG42 100 aa6.98□□□□□ -1.29
PCDH9-204ENST00000544246 A0A1B0GVX0 72 aa6.98□□□□□ -1.29
PCDH9-204ENST00000544246 KRTAP24-1Q3LI83 254 aa6.97□□□□□ -1.29
PCDH9-204ENST00000544246 IGLV1-50A0A075B6I6 118 aa6.97□□□□□ -1.29
PCDH9-204ENST00000544246 PRR15Q8IV56 129 aa6.97□□□□□ -1.29
PCDH9-204ENST00000544246 IGFL1Q6UW32 110 aa6.96□□□□□ -1.29
PCDH9-204ENST00000544246 TLN2Q9Y4G6 2542 aa6.96□□□□□ -1.29
PCDH9-204ENST00000544246 SORL1Q92673 2214 aa6.96□□□□□ -1.3
PCDH9-204ENST00000544246 LINC00483Q53H64 154 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms