RNA–Protein interactions for RNA: ENST00000543697.5

RAP1B-230, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAP1B, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-230ENST00000543697 HAMPP81172 84 aa4.79□□□□□ -1.64
RAP1B-230ENST00000543697 SYCNQ0VAF6 134 aa4.79□□□□□ -1.64
RAP1B-230ENST00000543697 PDZD11Q5EBL8 140 aa4.79□□□□□ -1.64
RAP1B-230ENST00000543697 C9orf163Q8N9P6 203 aa4.79□□□□□ -1.64
RAP1B-230ENST00000543697 OR10D4PQ8NGN7 298 aa4.79□□□□□ -1.64
RAP1B-230ENST00000543697 IFI27L1Q96BM0 104 aa4.79□□□□□ -1.64
RAP1B-230ENST00000543697 DPH3Q96FX2 82 aa4.79□□□□□ -1.64
RAP1B-230ENST00000543697 CST9LQ9H4G1 147 aa4.79□□□□□ -1.64
RAP1B-230ENST00000543697 TINCRA0A1B0GVN0 87 aa4.78□□□□□ -1.64
RAP1B-230ENST00000543697 H3BRM9 83 aa4.78□□□□□ -1.64
RAP1B-230ENST00000543697 HIST1H2BKO60814 126 aa4.78□□□□□ -1.64
RAP1B-230ENST00000543697 HIST1H2BJP06899 126 aa4.78□□□□□ -1.64
RAP1B-230ENST00000543697 FABP4P15090 132 aa4.78□□□□□ -1.64
RAP1B-230ENST00000543697 HIST1H2BOP23527 126 aa4.78□□□□□ -1.64
RAP1B-230ENST00000543697 HIST1H2BBP33778 126 aa4.78□□□□□ -1.64
RAP1B-230ENST00000543697 HIST1H2BDP58876 126 aa4.78□□□□□ -1.64
RAP1B-230ENST00000543697 HIST1H2BCP62807 126 aa4.78□□□□□ -1.64
RAP1B-230ENST00000543697 HIST2H2BEQ16778 126 aa4.78□□□□□ -1.64
RAP1B-230ENST00000543697 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.78□□□□□ -1.64
RAP1B-230ENST00000543697 HIST1H2BHQ93079 126 aa4.78□□□□□ -1.64
RAP1B-230ENST00000543697 HIST1H2BNQ99877 126 aa4.78□□□□□ -1.64
RAP1B-230ENST00000543697 HIST1H2BMQ99879 126 aa4.78□□□□□ -1.64
RAP1B-230ENST00000543697 CHAC1Q9BUX1 264 aa4.78□□□□□ -1.64
RAP1B-230ENST00000543697 DHRS4-AS1Q9P1J3 65 aa4.78□□□□□ -1.64
RAP1B-230ENST00000543697 CDKN2A-AS1Q9UH64 79 aa4.78□□□□□ -1.64
RAP1B-230ENST00000543697 CHTOPQ9Y3Y2 248 aaKnown RBP4.78□□□□□ -1.64
RAP1B-230ENST00000543697 TNXBP22105 4242 aa4.77□□□□□ -1.65
RAP1B-230ENST00000543697 IGKV2-24A0A0C4DH68 120 aa4.77□□□□□ -1.65
RAP1B-230ENST00000543697 E9PLD3 99 aa4.77□□□□□ -1.65
RAP1B-230ENST00000543697 NDUFA1O15239 70 aa4.77□□□□□ -1.65
RAP1B-230ENST00000543697 SPINK8P0C7L1 97 aa4.77□□□□□ -1.65
RAP1B-230ENST00000543697 CKS1BP61024 79 aa4.77□□□□□ -1.65
RAP1B-230ENST00000543697 C6orf226Q5I0X4 101 aa4.77□□□□□ -1.65
RAP1B-230ENST00000543697 FAM19A3Q7Z5A8 133 aa4.77□□□□□ -1.65
RAP1B-230ENST00000543697 HSPB8Q9UJY1 196 aa4.77□□□□□ -1.65
RAP1B-230ENST00000543697 PKIGQ9Y2B9 76 aa4.77□□□□□ -1.65
RAP1B-230ENST00000543697 NUPR1O60356 82 aa4.76□□□□□ -1.65
RAP1B-230ENST00000543697 RPL18AQ02543 176 aaKnown RBP4.76□□□□□ -1.65
RAP1B-230ENST00000543697 TMEM170BQ5T4T1 132 aa4.76□□□□□ -1.65
RAP1B-230ENST00000543697 Q6ZRU5 148 aa4.76□□□□□ -1.65
RAP1B-230ENST00000543697 LINC01561Q8N1V8 128 aa4.76□□□□□ -1.65
RAP1B-230ENST00000543697 SMR3BP02814 79 aaPredicted RBP4.75□□□□□ -1.65
RAP1B-230ENST00000543697 IGLC3P0DOY3 106 aa4.75□□□□□ -1.65
RAP1B-230ENST00000543697 MAJINQ3KP22 176 aa4.75□□□□□ -1.65
RAP1B-230ENST00000543697 UNQ6190/PRO20217Q6UXQ8 127 aa4.75□□□□□ -1.65
RAP1B-230ENST00000543697 Q8IZM0 81 aa4.75□□□□□ -1.65
RAP1B-230ENST00000543697 MAP1LC3CQ9BXW4 147 aa4.75□□□□□ -1.65
RAP1B-230ENST00000543697 TRAV12-1A0A0B4J245 112 aa4.74□□□□□ -1.65
RAP1B-230ENST00000543697 LOC107984640A0A0U1RRK4 108 aa4.74□□□□□ -1.65
RAP1B-230ENST00000543697 C11orf86A6NJI1 115 aa4.74□□□□□ -1.65
RAP1B-230ENST00000543697 F8VRH5 84 aa4.74□□□□□ -1.65
RAP1B-230ENST00000543697 CHTF8P0CG12 524 aa4.74□□□□□ -1.65
RAP1B-230ENST00000543697 ZNF22P17026 224 aaPredicted RBP4.74□□□□□ -1.65
RAP1B-230ENST00000543697 C2orf82Q6UX34 121 aa4.74□□□□□ -1.65
RAP1B-230ENST00000543697 SDIM1Q6ZPB5 146 aa4.74□□□□□ -1.65
RAP1B-230ENST00000543697 SCXQ7RTU7 201 aa4.74□□□□□ -1.65
RAP1B-230ENST00000543697 COX7B2Q8TF08 81 aa4.74□□□□□ -1.65
RAP1B-230ENST00000543697 MRPL35Q9NZE8 188 aaKnown RBP4.74□□□□□ -1.65
RAP1B-230ENST00000543697 A0A096LNI7 61 aa4.73□□□□□ -1.65
RAP1B-230ENST00000543697 TRBV30A0A0K0K1B3 111 aa4.73□□□□□ -1.65
RAP1B-230ENST00000543697 S100A6P06703 90 aa4.73□□□□□ -1.65
RAP1B-230ENST00000543697 CXCL5P42830 114 aa4.73□□□□□ -1.65
RAP1B-230ENST00000543697 PRR4Q16378 134 aa4.73□□□□□ -1.65
RAP1B-230ENST00000543697 Q6ZSA8 131 aa4.73□□□□□ -1.65
RAP1B-230ENST00000543697 PANO1I0J062 215 aa4.72□□□□□ -1.65
RAP1B-230ENST00000543697 S100A2P29034 98 aa4.72□□□□□ -1.65
RAP1B-230ENST00000543697 KIAA0087Q14695 138 aa4.72□□□□□ -1.65
RAP1B-230ENST00000543697 MTURNQ8N3F0 131 aa4.72□□□□□ -1.65
RAP1B-230ENST00000543697 CIRBP-AS1Q8TBR5 109 aa4.72□□□□□ -1.65
RAP1B-230ENST00000543697 PMCHL2Q9BQD1 86 aa4.72□□□□□ -1.65
RAP1B-230ENST00000543697 LINC00474Q9P2X8 69 aa4.72□□□□□ -1.65
RAP1B-230ENST00000543697 C6orf48Q9UBA6 75 aa4.72□□□□□ -1.65
RAP1B-230ENST00000543697 DPM2O94777 84 aa4.71□□□□□ -1.66
RAP1B-230ENST00000543697 CXCL6P80162 114 aa4.71□□□□□ -1.66
RAP1B-230ENST00000543697 C9orf116Q5BN46 136 aaPredicted RBP4.71□□□□□ -1.66
RAP1B-230ENST00000543697 SPACA4Q8TDM5 124 aa4.71□□□□□ -1.66
RAP1B-230ENST00000543697 NDUFC2-KCTD14E9PQ53 114 aa4.7□□□□□ -1.66
RAP1B-230ENST00000543697 IGKCP01834 107 aa4.7□□□□□ -1.66
RAP1B-230ENST00000543697 PLNP26678 52 aa4.7□□□□□ -1.66
RAP1B-230ENST00000543697 KRTDAPP60985 99 aa4.7□□□□□ -1.66
RAP1B-230ENST00000543697 HERVK_113P61574 105 aa4.7□□□□□ -1.66
RAP1B-230ENST00000543697 COA6Q5JTJ3 125 aaKnown RBP4.7□□□□□ -1.66
RAP1B-230ENST00000543697 DNAH8Q96JB1 4490 aa4.7□□□□□ -1.66
RAP1B-230ENST00000543697 IGLV8-61A0A075B6I0 122 aa4.69□□□□□ -1.66
RAP1B-230ENST00000543697 LOC105371267A0A1B0GV96 52 aa4.69□□□□□ -1.66
RAP1B-230ENST00000543697 TMEM223A0PJW6 202 aa4.69□□□□□ -1.66
RAP1B-230ENST00000543697 SYS1-DBNDD2H3BUS1 97 aa4.69□□□□□ -1.66
RAP1B-230ENST00000543697 PFN2P35080 140 aa4.69□□□□□ -1.66
RAP1B-230ENST00000543697 ZNF625Q96I27 306 aaPredicted RBP4.69□□□□□ -1.66
RAP1B-230ENST00000543697 C20orf202A1L168 122 aa4.68□□□□□ -1.66
RAP1B-230ENST00000543697 TLX1NBP0CAT3 122 aa4.68□□□□□ -1.66
RAP1B-230ENST00000543697 C3orf79P0CE67 100 aa4.68□□□□□ -1.66
RAP1B-230ENST00000543697 CIRBPQ14011 172 aaKnown RBP4.68□□□□□ -1.66
RAP1B-230ENST00000543697 MEIG1Q5JSS6 88 aa4.68□□□□□ -1.66
RAP1B-230ENST00000543697 SFTA2Q6UW10 78 aa4.68□□□□□ -1.66
RAP1B-230ENST00000543697 FAM19A5Q7Z5A7 132 aaPredicted RBP4.68□□□□□ -1.66
RAP1B-230ENST00000543697 C7orf33Q8WU49 177 aa4.68□□□□□ -1.66
RAP1B-230ENST00000543697 LGALS3P17931 250 aaKnown RBP4.67□□□□□ -1.66
RAP1B-230ENST00000543697 RPL37AP61513 92 aaKnown RBP4.67□□□□□ -1.66
RAP1B-230ENST00000543697 S100A12P80511 92 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms