RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 HSPG2P98160 4391 aa3.98□□□□□ -1.77
LTBR-212ENST00000543542 A0A0J9YXY3 114 aa3.97□□□□□ -1.77
LTBR-212ENST00000543542 NPC2P61916 151 aa3.97□□□□□ -1.77
LTBR-212ENST00000543542 LBHQ53QV2 105 aaPredicted RBP3.97□□□□□ -1.77
LTBR-212ENST00000543542 SERTAD4-AS1Q5TG53 156 aa3.97□□□□□ -1.77
LTBR-212ENST00000543542 DAND5Q8N907 189 aa3.97□□□□□ -1.77
LTBR-212ENST00000543542 TTTY13Q9BZ97 58 aa3.97□□□□□ -1.77
LTBR-212ENST00000543542 C22orf24Q9Y442 160 aa3.97□□□□□ -1.77
LTBR-212ENST00000543542 GAGE10A6NGK3 116 aa3.96□□□□□ -1.78
LTBR-212ENST00000543542 MRPL55Q7Z7F7 128 aaKnown RBP3.96□□□□□ -1.78
LTBR-212ENST00000543542 BOD1L2Q8IYS8 172 aa3.96□□□□□ -1.78
LTBR-212ENST00000543542 VAMP8Q9BV40 100 aa3.96□□□□□ -1.78
LTBR-212ENST00000543542 PLA2G2DQ9UNK4 145 aa3.96□□□□□ -1.78
LTBR-212ENST00000543542 HERC2O95714 4834 aa3.95□□□□□ -1.78
LTBR-212ENST00000543542 TMEM238C9JI98 176 aa3.95□□□□□ -1.78
LTBR-212ENST00000543542 NCR3O14931 201 aa3.95□□□□□ -1.78
LTBR-212ENST00000543542 JOSD1Q15040 202 aaPredicted RBP3.95□□□□□ -1.78
LTBR-212ENST00000543542 C1orf137Q5JT78 98 aa3.95□□□□□ -1.78
LTBR-212ENST00000543542 PCP2Q8IVA1 136 aa3.95□□□□□ -1.78
LTBR-212ENST00000543542 PAM16Q9Y3D7 125 aa3.95□□□□□ -1.78
LTBR-212ENST00000543542 RPL37AP8A6NKH3 93 aa3.94□□□□□ -1.78
LTBR-212ENST00000543542 TIMM17BO60830 172 aa3.94□□□□□ -1.78
LTBR-212ENST00000543542 INAFM2P0DMQ5 153 aa3.94□□□□□ -1.78
LTBR-212ENST00000543542 S100A12P80511 92 aa3.94□□□□□ -1.78
LTBR-212ENST00000543542 SPATA45Q537H7 98 aa3.94□□□□□ -1.78
LTBR-212ENST00000543542 COPS9Q8WXC6 57 aa3.94□□□□□ -1.78
LTBR-212ENST00000543542 LINC00167Q96N53 147 aa3.94□□□□□ -1.78
LTBR-212ENST00000543542 TP73-AS1Q9UF72 201 aa3.94□□□□□ -1.78
LTBR-212ENST00000543542 IGLV5-37A0A075B6J1 123 aa3.93□□□□□ -1.78
LTBR-212ENST00000543542 IGKV2-28A0A075B6P5 120 aa3.93□□□□□ -1.78
LTBR-212ENST00000543542 M0R378 163 aa3.93□□□□□ -1.78
LTBR-212ENST00000543542 IGKV2D-28P01615 120 aa3.93□□□□□ -1.78
LTBR-212ENST00000543542 VPREB1P12018 145 aa3.93□□□□□ -1.78
LTBR-212ENST00000543542 PRR3P79522 188 aaKnown RBP3.93□□□□□ -1.78
LTBR-212ENST00000543542 SRSF9Q13242 221 aaKnown RBP eCLIP3.93□□□□□ -1.78
LTBR-212ENST00000543542 ADAMTSL4-AS1Q5T5F5 129 aa3.93□□□□□ -1.78
LTBR-212ENST00000543542 KRTAP7-1Q8IUC3 87 aa3.93□□□□□ -1.78
LTBR-212ENST00000543542 PSORS1C2Q9UIG4 136 aa3.93□□□□□ -1.78
LTBR-212ENST00000543542 PYY3Q5JQD4 70 aa3.92□□□□□ -1.78
LTBR-212ENST00000543542 S100A7L2Q5SY68 101 aa3.92□□□□□ -1.78
LTBR-212ENST00000543542 OR13C6PQ8NH95 151 aa3.92□□□□□ -1.78
LTBR-212ENST00000543542 LINC00308Q8TCZ7 52 aa3.92□□□□□ -1.78
LTBR-212ENST00000543542 C14orf144Q96I85 54 aa3.92□□□□□ -1.78
LTBR-212ENST00000543542 KRTAP17-1Q9BYP8 105 aa3.92□□□□□ -1.78
LTBR-212ENST00000543542 KRTAP4-5Q9BYR2 181 aa3.92□□□□□ -1.78
LTBR-212ENST00000543542 FAT1Q14517 4588 aa3.92□□□□□ -1.78
LTBR-212ENST00000543542 VPS13BQ7Z7G8 4022 aa3.91□□□□□ -1.78
LTBR-212ENST00000543542 NDUFC2O95298 119 aa3.91□□□□□ -1.78
LTBR-212ENST00000543542 COX8AP10176 69 aa3.91□□□□□ -1.78
LTBR-212ENST00000543542 IFITM1P13164 125 aa3.91□□□□□ -1.78
LTBR-212ENST00000543542 UBE2AP49459 152 aa3.91□□□□□ -1.78
LTBR-212ENST00000543542 SLC25A34Q6PIV7 304 aa3.91□□□□□ -1.78
LTBR-212ENST00000543542 Q6ZVH6 145 aa3.91□□□□□ -1.78
LTBR-212ENST00000543542 Q8NDZ9 215 aa3.91□□□□□ -1.78
LTBR-212ENST00000543542 LITAFQ99732 161 aa3.91□□□□□ -1.78
LTBR-212ENST00000543542 SPANXDQ9BXN6 97 aa3.91□□□□□ -1.78
LTBR-212ENST00000543542 SPANXB1Q9NS25 103 aaPredicted RBP3.91□□□□□ -1.78
LTBR-212ENST00000543542 SPANXCQ9NY87 97 aa3.91□□□□□ -1.78
LTBR-212ENST00000543542 IGLV1-50A0A075B6I6 118 aa3.9□□□□□ -1.79
LTBR-212ENST00000543542 LOC107984156A0A0G2JMH3 177 aa3.9□□□□□ -1.79
LTBR-212ENST00000543542 IGLV7-43P04211 117 aa3.9□□□□□ -1.79
LTBR-212ENST00000543542 DDTP30046 118 aa3.9□□□□□ -1.79
LTBR-212ENST00000543542 REG3GQ6UW15 175 aa3.9□□□□□ -1.79
LTBR-212ENST00000543542 SOSTDC1Q6X4U4 206 aa3.9□□□□□ -1.79
LTBR-212ENST00000543542 FAM19A1Q7Z5A9 133 aa3.9□□□□□ -1.79
LTBR-212ENST00000543542 KRTAP11-1Q8IUC1 163 aa3.9□□□□□ -1.79
LTBR-212ENST00000543542 MUSTN1Q8IVN3 82 aa3.9□□□□□ -1.79
LTBR-212ENST00000543542 ARL17AQ8IVW1 177 aa3.9□□□□□ -1.79
LTBR-212ENST00000543542 HIST1H4GQ99525 98 aa3.9□□□□□ -1.79
LTBR-212ENST00000543542 TRBV10-3A0A0K0K1G6 114 aa3.89□□□□□ -1.79
LTBR-212ENST00000543542 TRBV10-2A0A0K0K1G8 114 aa3.89□□□□□ -1.79
LTBR-212ENST00000543542 ETDCA0A1B0GVM5 59 aa3.89□□□□□ -1.79
LTBR-212ENST00000543542 PRYO14603 147 aa3.89□□□□□ -1.79
LTBR-212ENST00000543542 DLEU1O43261 78 aa3.89□□□□□ -1.79
LTBR-212ENST00000543542 BCE1O60756 84 aa3.89□□□□□ -1.79
LTBR-212ENST00000543542 SPINK6Q6UWN8 80 aa3.89□□□□□ -1.79
LTBR-212ENST00000543542 LINC00518Q8N0U6 118 aa3.89□□□□□ -1.79
LTBR-212ENST00000543542 TMEM126AQ9H061 195 aa3.89□□□□□ -1.79
LTBR-212ENST00000543542 CBY1Q9Y3M2 126 aa3.89□□□□□ -1.79
LTBR-212ENST00000543542 SRRM2Q9UQ35 2752 aaKnown RBP3.88□□□□□ -1.79
LTBR-212ENST00000543542 A6NDN8 102 aa3.88□□□□□ -1.79
LTBR-212ENST00000543542 EIF4EBP3O60516 100 aaPredicted RBP3.88□□□□□ -1.79
LTBR-212ENST00000543542 RPL28P46779 137 aaKnown RBP3.88□□□□□ -1.79
LTBR-212ENST00000543542 HNRNPA3P51991 378 aaKnown RBP3.88□□□□□ -1.79
LTBR-212ENST00000543542 KRTAP10-4P60372 401 aaPredicted RBP3.88□□□□□ -1.79
LTBR-212ENST00000543542 DIRC1Q969H9 104 aa3.88□□□□□ -1.79
LTBR-212ENST00000543542 TRAV23DV6A0A075B6W5 121 aa3.87□□□□□ -1.79
LTBR-212ENST00000543542 ZNF861PO60384 105 aa3.87□□□□□ -1.79
LTBR-212ENST00000543542 HINT1P49773 126 aaPredicted RBP3.87□□□□□ -1.79
LTBR-212ENST00000543542 ABCA13Q86UQ4 5058 aa3.87□□□□□ -1.79
LTBR-212ENST00000543542 PKHD1L1Q86WI1 4243 aa3.87□□□□□ -1.79
LTBR-212ENST00000543542 TRAV13-2A0A0B4J235 113 aa3.86□□□□□ -1.79
LTBR-212ENST00000543542 J3QL48 77 aa3.86□□□□□ -1.79
LTBR-212ENST00000543542 SMIM6P0DI80 62 aa3.86□□□□□ -1.79
LTBR-212ENST00000543542 PRLHP81277 87 aa3.86□□□□□ -1.79
LTBR-212ENST00000543542 C12orf57Q99622 126 aa3.86□□□□□ -1.79
LTBR-212ENST00000543542 HIGD2AQ9BW72 106 aa3.86□□□□□ -1.79
LTBR-212ENST00000543542 KCNQ1DNQ9H478 68 aa3.86□□□□□ -1.79
LTBR-212ENST00000543542 HIGD1BQ9P298 99 aa3.86□□□□□ -1.79
LTBR-212ENST00000543542 UQCR10Q9UDW1 63 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms