RNA–Protein interactions for RNA: ENST00000543455.1

TMED3-204, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 1,483 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-204ENST00000543455 J3QQQ9 107 aa11.49□□□□□ -0.57
TMED3-204ENST00000543455 TLX1NBP0CAT3 122 aa11.49□□□□□ -0.57
TMED3-204ENST00000543455 NMUP48645 174 aa11.49□□□□□ -0.57
TMED3-204ENST00000543455 SRSF9Q13242 221 aaKnown RBP eCLIP11.49□□□□□ -0.57
TMED3-204ENST00000543455 C2orf82Q6UX34 121 aa11.49□□□□□ -0.57
TMED3-204ENST00000543455 TSPEAR-AS2P59090 65 aa11.48□□□□□ -0.57
TMED3-204ENST00000543455 PHF5AQ7RTV0 110 aaKnown RBP11.48□□□□□ -0.57
TMED3-204ENST00000543455 FAM168BA1KXE4 195 aa11.47□□□□□ -0.57
TMED3-204ENST00000543455 COX8AP10176 69 aa11.47□□□□□ -0.57
TMED3-204ENST00000543455 KRTAP7-1Q8IUC3 87 aa11.47□□□□□ -0.57
TMED3-204ENST00000543455 LGALS3P17931 250 aaKnown RBP11.46□□□□□ -0.57
TMED3-204ENST00000543455 PCP2Q8IVA1 136 aa11.46□□□□□ -0.57
TMED3-204ENST00000543455 COX7B2Q8TF08 81 aa11.46□□□□□ -0.57
TMED3-204ENST00000543455 LBHQ53QV2 105 aaPredicted RBP11.45□□□□□ -0.58
TMED3-204ENST00000543455 KRTAP11-1Q8IUC1 163 aa11.45□□□□□ -0.58
TMED3-204ENST00000543455 C14orf144Q96I85 54 aa11.45□□□□□ -0.58
TMED3-204ENST00000543455 LINC01600Q96MT4 127 aa11.45□□□□□ -0.58
TMED3-204ENST00000543455 PSORS1C2Q9UIG4 136 aa11.45□□□□□ -0.58
TMED3-204ENST00000543455 SPINK6Q6UWN8 80 aa11.44□□□□□ -0.58
TMED3-204ENST00000543455 BOD1L2Q8IYS8 172 aa11.44□□□□□ -0.58
TMED3-204ENST00000543455 Q8IZM0 81 aa11.44□□□□□ -0.58
TMED3-204ENST00000543455 TTTY13Q9BZ97 58 aa11.44□□□□□ -0.58
TMED3-204ENST00000543455 DLEU1O43261 78 aa11.44□□□□□ -0.58
TMED3-204ENST00000543455 TOMM7Q9P0U1 55 aa11.44□□□□□ -0.58
TMED3-204ENST00000543455 TRBV30A0A0K0K1B3 111 aa11.43□□□□□ -0.58
TMED3-204ENST00000543455 GAGE2EQ4V326 116 aa11.43□□□□□ -0.58
TMED3-204ENST00000543455 SLC25A34Q6PIV7 304 aa11.43□□□□□ -0.58
TMED3-204ENST00000543455 GAGE2DQ9UEU5 116 aa11.43□□□□□ -0.58
TMED3-204ENST00000543455 MYMXA0A1B0GTQ4 84 aa11.42□□□□□ -0.58
TMED3-204ENST00000543455 PRSS2P07478 247 aa11.42□□□□□ -0.58
TMED3-204ENST00000543455 NDUFA12Q9UI09 145 aa11.42□□□□□ -0.58
TMED3-204ENST00000543455 ZNF815PA8K554 130 aa11.41□□□□□ -0.58
TMED3-204ENST00000543455 C6orf226Q5I0X4 101 aa11.41□□□□□ -0.58
TMED3-204ENST00000543455 ZNF625Q96I27 306 aaPredicted RBP11.41□□□□□ -0.58
TMED3-204ENST00000543455 C9orf129Q5T035 196 aaKnown RBP11.4□□□□□ -0.58
TMED3-204ENST00000543455 FAM19A5Q7Z5A7 132 aaPredicted RBP11.4□□□□□ -0.58
TMED3-204ENST00000543455 PLA2G2DQ9UNK4 145 aa11.4□□□□□ -0.58
TMED3-204ENST00000543455 NDUFC2-KCTD14E9PQ53 114 aa11.39□□□□□ -0.59
TMED3-204ENST00000543455 TP73-AS1Q9UF72 201 aa11.39□□□□□ -0.59
TMED3-204ENST00000543455 CXCL5P42830 114 aa11.38□□□□□ -0.59
TMED3-204ENST00000543455 SFTA2Q6UW10 78 aa11.38□□□□□ -0.59
TMED3-204ENST00000543455 M0R143 59 aa11.38□□□□□ -0.59
TMED3-204ENST00000543455 KRTAP10-8P60410 259 aa11.38□□□□□ -0.59
TMED3-204ENST00000543455 UBR4Q5T4S7 5183 aa11.37□□□□□ -0.59
TMED3-204ENST00000543455 CKS1BP61024 79 aa11.37□□□□□ -0.59
TMED3-204ENST00000543455 HERV-K104P63124 156 aa11.37□□□□□ -0.59
TMED3-204ENST00000543455 C1orf137Q5JT78 98 aa11.37□□□□□ -0.59
TMED3-204ENST00000543455 REG3GQ6UW15 175 aa11.36□□□□□ -0.59
TMED3-204ENST00000543455 A0A0J9YXY3 114 aa11.35□□□□□ -0.59
TMED3-204ENST00000543455 M0QXV9 152 aa11.34□□□□□ -0.59
TMED3-204ENST00000543455 SCGB1D4Q6XE38 83 aa11.34□□□□□ -0.59
TMED3-204ENST00000543455 C2orf91Q6ZV80 131 aa11.34□□□□□ -0.59
TMED3-204ENST00000543455 CTAG1AP78358 180 aa11.33□□□□□ -0.6
TMED3-204ENST00000543455 HIGD1BQ9P298 99 aa11.33□□□□□ -0.6
TMED3-204ENST00000543455 IGLV7-43P04211 117 aa11.32□□□□□ -0.6
TMED3-204ENST00000543455 TIMM17BO60830 172 aa11.31□□□□□ -0.6
TMED3-204ENST00000543455 LITAFQ99732 161 aa11.3□□□□□ -0.6
TMED3-204ENST00000543455 XAGE1AQ9HD64 81 aa11.3□□□□□ -0.6
TMED3-204ENST00000543455 MEIG1Q5JSS6 88 aa11.29□□□□□ -0.6
TMED3-204ENST00000543455 SNHG12Q9BXW3 62 aa11.29□□□□□ -0.6
TMED3-204ENST00000543455 ERG28Q9UKR5 140 aa11.28□□□□□ -0.6
TMED3-204ENST00000543455 TMEM238C9JI98 176 aa11.27□□□□□ -0.6
TMED3-204ENST00000543455 SPANXB1Q9NS25 103 aaPredicted RBP11.27□□□□□ -0.6
TMED3-204ENST00000543455 SMIM13P0DJ93 91 aa11.26□□□□□ -0.61
TMED3-204ENST00000543455 UBE2BP63146 152 aa11.26□□□□□ -0.61
TMED3-204ENST00000543455 COX17Q14061 63 aa11.26□□□□□ -0.61
TMED3-204ENST00000543455 ADAMTSL4-AS1Q5T5F5 129 aa11.26□□□□□ -0.61
TMED3-204ENST00000543455 C22orf24Q9Y442 160 aa11.26□□□□□ -0.61
TMED3-204ENST00000543455 LRP2P98164 4655 aa11.26□□□□□ -0.61
TMED3-204ENST00000543455 H0Y9J4 135 aa11.25□□□□□ -0.61
TMED3-204ENST00000543455 PFN2P35080 140 aa11.25□□□□□ -0.61
TMED3-204ENST00000543455 COL5A1-AS1Q5SY13 56 aa11.25□□□□□ -0.61
TMED3-204ENST00000543455 DIRC1Q969H9 104 aa11.25□□□□□ -0.61
TMED3-204ENST00000543455 SPANXDQ9BXN6 97 aa11.25□□□□□ -0.61
TMED3-204ENST00000543455 SPANXCQ9NY87 97 aa11.25□□□□□ -0.61
TMED3-204ENST00000543455 A0A0U1RRA0 63 aa11.24□□□□□ -0.61
TMED3-204ENST00000543455 LINC00158P58513 81 aa11.24□□□□□ -0.61
TMED3-204ENST00000543455 TAL2Q16559 108 aa11.24□□□□□ -0.61
TMED3-204ENST00000543455 Q6ZVH6 145 aa11.24□□□□□ -0.61
TMED3-204ENST00000543455 HSD52Q0P140 79 aa11.23□□□□□ -0.61
TMED3-204ENST00000543455 KRTAP1-4P0C5Y4 121 aa11.22□□□□□ -0.61
TMED3-204ENST00000543455 HIST1H4GQ99525 98 aa11.22□□□□□ -0.61
TMED3-204ENST00000543455 MIR7-3HGQ8N6C7 128 aa11.21□□□□□ -0.61
TMED3-204ENST00000543455 DAND5Q8N907 189 aa11.21□□□□□ -0.61
TMED3-204ENST00000543455 PRR26Q8N8Z3 221 aa11.2□□□□□ -0.62
TMED3-204ENST00000543455 IFITM1P13164 125 aa11.19□□□□□ -0.62
TMED3-204ENST00000543455 HINT1P49773 126 aaPredicted RBP11.19□□□□□ -0.62
TMED3-204ENST00000543455 BVES-AS1Q5T3Y7 98 aa11.19□□□□□ -0.62
TMED3-204ENST00000543455 MRPL55Q7Z7F7 128 aaKnown RBP11.19□□□□□ -0.62
TMED3-204ENST00000543455 BATFQ16520 125 aa11.18□□□□□ -0.62
TMED3-204ENST00000543455 MUSTN1Q8IVN3 82 aa11.18□□□□□ -0.62
TMED3-204ENST00000543455 CEND1Q8N111 149 aa11.18□□□□□ -0.62
TMED3-204ENST00000543455 LINC00308Q8TCZ7 52 aa11.18□□□□□ -0.62
TMED3-204ENST00000543455 PPDPFQ9H3Y8 114 aa11.18□□□□□ -0.62
TMED3-204ENST00000543455 COPS9Q8WXC6 57 aa11.17□□□□□ -0.62
TMED3-204ENST00000543455 LINC00167Q96N53 147 aa11.17□□□□□ -0.62
TMED3-204ENST00000543455 LOC107984156A0A0G2JMH3 177 aa11.16□□□□□ -0.62
TMED3-204ENST00000543455 EIF4EBP3O60516 100 aaPredicted RBP11.16□□□□□ -0.62
TMED3-204ENST00000543455 SOSTDC1Q6X4U4 206 aa11.16□□□□□ -0.62
TMED3-204ENST00000543455 ARL17AQ8IVW1 177 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms