RNA–Protein interactions for RNA: ENST00000543058.1

MRPL48-211, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 3

Gene MRPL48, Length 699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-211ENST00000543058 DEFB123Q8N688 67 aa1.49□□□□□ -2.17
MRPL48-211ENST00000543058 GAFA1Q96PS6 74 aa1.49□□□□□ -2.17
MRPL48-211ENST00000543058 PRO3102Q9H379 93 aa1.49□□□□□ -2.17
MRPL48-211ENST00000543058 TMEM167BQ9NRX6 74 aa1.49□□□□□ -2.17
MRPL48-211ENST00000543058 MALRD1Q5VYJ5 2156 aa1.49□□□□□ -2.17
MRPL48-211ENST00000543058 MKI67P46013 3256 aaKnown RBP1.49□□□□□ -2.17
MRPL48-211ENST00000543058 VCANP13611 3396 aa1.48□□□□□ -2.17
MRPL48-211ENST00000543058 MED13Q9UHV7 2174 aa1.48□□□□□ -2.17
MRPL48-211ENST00000543058 PLXNB2O15031 1838 aa1.48□□□□□ -2.17
MRPL48-211ENST00000543058 IGKV2-40A0A087WW87 121 aaPredicted RBP1.48□□□□□ -2.17
MRPL48-211ENST00000543058 LOC110117498A0A087WWA1 95 aa1.48□□□□□ -2.17
MRPL48-211ENST00000543058 LINC00959A0A1B0GUT2 108 aa1.48□□□□□ -2.17
MRPL48-211ENST00000543058 NDUFA4O00483 81 aa1.48□□□□□ -2.17
MRPL48-211ENST00000543058 NDUFA3O95167 84 aa1.48□□□□□ -2.17
MRPL48-211ENST00000543058 IGKV2D-40P01614 121 aaPredicted RBP1.48□□□□□ -2.17
MRPL48-211ENST00000543058 DEFB112Q30KQ8 113 aa1.48□□□□□ -2.17
MRPL48-211ENST00000543058 KRTAP13-1Q8IUC0 172 aa1.48□□□□□ -2.17
MRPL48-211ENST00000543058 LINC00472Q9H8W2 130 aa1.48□□□□□ -2.17
MRPL48-211ENST00000543058 CUL9Q8IWT3 2517 aa1.48□□□□□ -2.17
MRPL48-211ENST00000543058 HMCN1Q96RW7 5635 aa1.48□□□□□ -2.17
MRPL48-211ENST00000543058 UNC80Q8N2C7 3258 aa1.48□□□□□ -2.17
MRPL48-211ENST00000543058 ARHGAP32A7KAX9 2087 aa1.47□□□□□ -2.17
MRPL48-211ENST00000543058 SPTBN5Q9NRC6 3674 aaKnown RBP1.47□□□□□ -2.17
MRPL48-211ENST00000543058 H0YGX0 51 aa1.47□□□□□ -2.17
MRPL48-211ENST00000543058 RPL37AP61513 92 aaKnown RBP1.47□□□□□ -2.17
MRPL48-211ENST00000543058 COA5Q86WW8 74 aa1.47□□□□□ -2.17
MRPL48-211ENST00000543058 KCNQ1DNQ9H478 68 aa1.47□□□□□ -2.17
MRPL48-211ENST00000543058 BRCA2P51587 3418 aa1.47□□□□□ -2.17
MRPL48-211ENST00000543058 MPDZO75970 2070 aa1.46□□□□□ -2.18
MRPL48-211ENST00000543058 TPRXLQ17RH7 258 aa1.46□□□□□ -2.18
MRPL48-211ENST00000543058 C5orf56Q8N8D9 126 aa1.46□□□□□ -2.18
MRPL48-211ENST00000543058 Q96NJ1 140 aa1.46□□□□□ -2.18
MRPL48-211ENST00000543058 BAHCC1Q9P281 2608 aa1.46□□□□□ -2.18
MRPL48-211ENST00000543058 COL4A2P08572 1712 aa1.46□□□□□ -2.18
MRPL48-211ENST00000543058 CR1P17927 2039 aa1.45□□□□□ -2.18
MRPL48-211ENST00000543058 LAMA3Q16787 3333 aa1.45□□□□□ -2.18
MRPL48-211ENST00000543058 NCOA6Q14686 2063 aaPredicted RBP1.45□□□□□ -2.18
MRPL48-211ENST00000543058 TRGV2A0A075B6R0 118 aa1.45□□□□□ -2.18
MRPL48-211ENST00000543058 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.45□□□□□ -2.18
MRPL48-211ENST00000543058 A0A0G2JQZ4 141 aa1.45□□□□□ -2.18
MRPL48-211ENST00000543058 ETDCA0A1B0GVM5 59 aa1.45□□□□□ -2.18
MRPL48-211ENST00000543058 IGKV2-29A2NJV5 120 aaPredicted RBP1.45□□□□□ -2.18
MRPL48-211ENST00000543058 HAMPP81172 84 aa1.45□□□□□ -2.18
MRPL48-211ENST00000543058 SPACA4Q8TDM5 124 aa1.45□□□□□ -2.18
MRPL48-211ENST00000543058 RANBP2P49792 3224 aaKnown RBP1.45□□□□□ -2.18
MRPL48-211ENST00000543058 MUC3AQ02505 3323 aa1.45□□□□□ -2.18
MRPL48-211ENST00000543058 CACNA1AO00555 2505 aa1.44□□□□□ -2.18
MRPL48-211ENST00000543058 TRGV1A0A0A0MS02 117 aa1.44□□□□□ -2.18
MRPL48-211ENST00000543058 COX7BP24311 80 aa1.44□□□□□ -2.18
MRPL48-211ENST00000543058 C10orf55Q5SWW7 151 aa1.44□□□□□ -2.18
MRPL48-211ENST00000543058 ZFHX3Q15911 3703 aa1.44□□□□□ -2.18
MRPL48-211ENST00000543058 FREM3P0C091 2139 aa1.43□□□□□ -2.18
MRPL48-211ENST00000543058 A0A1B0GU69 56 aa1.43□□□□□ -2.18
MRPL48-211ENST00000543058 H3BRN7 92 aa1.43□□□□□ -2.18
MRPL48-211ENST00000543058 NCR3O14931 201 aa1.43□□□□□ -2.18
MRPL48-211ENST00000543058 RPL38P63173 70 aaKnown RBP1.43□□□□□ -2.18
MRPL48-211ENST00000543058 TFF3Q07654 80 aa1.43□□□□□ -2.18
MRPL48-211ENST00000543058 MYO7BQ6PIF6 2116 aa1.43□□□□□ -2.18
MRPL48-211ENST00000543058 CENPFP49454 3210 aa1.43□□□□□ -2.18
MRPL48-211ENST00000543058 EYSQ5T1H1 3165 aa1.43□□□□□ -2.18
MRPL48-211ENST00000543058 BAZ2BQ9UIF8 2168 aaKnown RBP1.42□□□□□ -2.18
MRPL48-211ENST00000543058 HTTP42858 3142 aa1.42□□□□□ -2.18
MRPL48-211ENST00000543058 PI4KAP42356 2102 aa1.42□□□□□ -2.18
MRPL48-211ENST00000543058 ZGRF1Q86YA3 2104 aa1.42□□□□□ -2.18
MRPL48-211ENST00000543058 TET1Q8NFU7 2136 aa1.42□□□□□ -2.18
MRPL48-211ENST00000543058 HEATR1Q9H583 2144 aaKnown RBP1.42□□□□□ -2.18
MRPL48-211ENST00000543058 RPS27LQ71UM5 84 aaKnown RBP1.42□□□□□ -2.18
MRPL48-211ENST00000543058 CNFNQ9BYD5 112 aa1.42□□□□□ -2.18
MRPL48-211ENST00000543058 ZFHX4Q86UP3 3567 aa1.42□□□□□ -2.18
MRPL48-211ENST00000543058 KIAA0100Q14667 2235 aaKnown RBP1.42□□□□□ -2.18
MRPL48-211ENST00000543058 FBN1P35555 2871 aaKnown RBP1.41□□□□□ -2.18
MRPL48-211ENST00000543058 INE1O15225 51 aa1.41□□□□□ -2.18
MRPL48-211ENST00000543058 IAPPP10997 89 aa1.41□□□□□ -2.18
MRPL48-211ENST00000543058 ACYP2P14621 99 aa1.41□□□□□ -2.18
MRPL48-211ENST00000543058 KRTAP12-3P60328 96 aa1.41□□□□□ -2.18
MRPL48-211ENST00000543058 KRTAP13-4Q3LI77 160 aa1.41□□□□□ -2.18
MRPL48-211ENST00000543058 PCOTHQ58A44 107 aa1.41□□□□□ -2.18
MRPL48-211ENST00000543058 SMIM2Q9BVW6 85 aa1.41□□□□□ -2.18
MRPL48-211ENST00000543058 SSC5DA1L4H1 1573 aa1.41□□□□□ -2.18
MRPL48-211ENST00000543058 MDC1Q14676 2089 aaKnown RBP1.41□□□□□ -2.18
MRPL48-211ENST00000543058 HEATR5BQ9P2D3 2071 aa1.41□□□□□ -2.18
MRPL48-211ENST00000543058 MED12Q93074 2177 aa1.41□□□□□ -2.18
MRPL48-211ENST00000543058 CEP290O15078 2479 aa1.41□□□□□ -2.18
MRPL48-211ENST00000543058 PRUNE2Q8WUY3 3088 aa1.4□□□□□ -2.19
MRPL48-211ENST00000543058 INTS1Q8N201 2190 aaKnown RBP1.4□□□□□ -2.19
MRPL48-211ENST00000543058 DEFB131BA0A096LNP1 70 aa1.4□□□□□ -2.19
MRPL48-211ENST00000543058 CPSF4LA6NMK7 179 aaKnown RBP1.4□□□□□ -2.19
MRPL48-211ENST00000543058 FXYD4P59646 89 aa1.4□□□□□ -2.19
MRPL48-211ENST00000543058 DEFB103AP81534 67 aa1.4□□□□□ -2.19
MRPL48-211ENST00000543058 ARHGAP5-AS1Q96IT6 56 aa1.4□□□□□ -2.19
MRPL48-211ENST00000543058 CDH23Q9H251 3354 aa1.4□□□□□ -2.19
MRPL48-211ENST00000543058 TTC28Q96AY4 2481 aa1.4□□□□□ -2.19
MRPL48-211ENST00000543058 LAMA2P24043 3122 aaKnown RBP1.39□□□□□ -2.19
MRPL48-211ENST00000543058 M0R2N4 97 aa1.39□□□□□ -2.19
MRPL48-211ENST00000543058 MRPL33O75394 65 aaKnown RBP1.39□□□□□ -2.19
MRPL48-211ENST00000543058 KRTAP12-1P59990 96 aa1.39□□□□□ -2.19
MRPL48-211ENST00000543058 LINC00308Q8TCZ7 52 aa1.39□□□□□ -2.19
MRPL48-211ENST00000543058 CCL19Q99731 98 aa1.39□□□□□ -2.19
MRPL48-211ENST00000543058 KMT2BQ9UMN6 2715 aaPredicted RBP1.39□□□□□ -2.19
MRPL48-211ENST00000543058 PIEZO1Q92508 2521 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms