RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 X6R8D5 127 aa9.02□□□□□ -0.96
TNC-212ENST00000542877 JMJD1CQ15652 2540 aa9.02□□□□□ -0.97
TNC-212ENST00000542877 Q9UF83 564 aa9.01□□□□□ -0.97
TNC-212ENST00000542877 H3BPC8 53 aa9.01□□□□□ -0.97
TNC-212ENST00000542877 TLN2Q9Y4G6 2542 aa9.01□□□□□ -0.97
TNC-212ENST00000542877 Q8NBF4 154 aa9□□□□□ -0.97
TNC-212ENST00000542877 FN1P02751 2386 aaKnown RBP9□□□□□ -0.97
TNC-212ENST00000542877 KLK9Q2XQG4 91 aa9□□□□□ -0.97
TNC-212ENST00000542877 LITAFQ99732 161 aa8.98□□□□□ -0.97
TNC-212ENST00000542877 Q6ZRX8 168 aa8.98□□□□□ -0.97
TNC-212ENST00000542877 NHLRC4P0CG21 123 aaPredicted RBP8.97□□□□□ -0.97
TNC-212ENST00000542877 ACYP2P14621 99 aa8.97□□□□□ -0.97
TNC-212ENST00000542877 C4orf26Q17RF5 130 aa8.97□□□□□ -0.97
TNC-212ENST00000542877 PTPRBP23467 1997 aa8.97□□□□□ -0.97
TNC-212ENST00000542877 IGKV2D-30A0A075B6S6 120 aa8.96□□□□□ -0.97
TNC-212ENST00000542877 A0A1B0GU69 56 aa8.96□□□□□ -0.97
TNC-212ENST00000542877 IGKV2-30P06310 120 aa8.96□□□□□ -0.97
TNC-212ENST00000542877 ZFYVE26Q68DK2 2539 aa8.96□□□□□ -0.98
TNC-212ENST00000542877 LINC00476Q8WZB0 136 aa8.95□□□□□ -0.98
TNC-212ENST00000542877 LRRK2Q5S007 2527 aa8.94□□□□□ -0.98
TNC-212ENST00000542877 GVQW2A0A096LPI5 108 aaPredicted RBP8.94□□□□□ -0.98
TNC-212ENST00000542877 MOBPQ13875 183 aa8.94□□□□□ -0.98
TNC-212ENST00000542877 TM2D3Q9BRN9 247 aa8.94□□□□□ -0.98
TNC-212ENST00000542877 USP9YO00507 2555 aaPredicted RBP8.93□□□□□ -0.98
TNC-212ENST00000542877 C7orf65Q6ZTY9 151 aa8.93□□□□□ -0.98
TNC-212ENST00000542877 SETD2Q9BYW2 2564 aaPredicted RBP8.93□□□□□ -0.98
TNC-212ENST00000542877 FSHBP01225 129 aa8.93□□□□□ -0.98
TNC-212ENST00000542877 TRAV22A0A0B4J277 110 aa8.91□□□□□ -0.98
TNC-212ENST00000542877 MDFIQ99750 246 aa8.91□□□□□ -0.98
TNC-212ENST00000542877 PKD1L2Q7Z442 2459 aa8.9□□□□□ -0.98
TNC-212ENST00000542877 COL27A1Q8IZC6 1860 aaPredicted RBP8.9□□□□□ -0.99
TNC-212ENST00000542877 IGLV6-57P01721 117 aa8.89□□□□□ -0.99
TNC-212ENST00000542877 SPAG11AQ6PDA7 123 aa8.89□□□□□ -0.99
TNC-212ENST00000542877 MUC4Q99102 2169 aa8.89□□□□□ -0.99
TNC-212ENST00000542877 ANKRD11Q6UB99 2663 aaPredicted RBP8.89□□□□□ -0.99
TNC-212ENST00000542877 TRBV7-4A0A0J9YYF1 115 aa8.88□□□□□ -0.99
TNC-212ENST00000542877 C16orf90A8MZG2 172 aa8.88□□□□□ -0.99
TNC-212ENST00000542877 ERC2-IT1O76042 136 aa8.88□□□□□ -0.99
TNC-212ENST00000542877 ST20-AS1Q8NBB2 130 aa8.88□□□□□ -0.99
TNC-212ENST00000542877 Q8NAQ8 132 aa8.88□□□□□ -0.99
TNC-212ENST00000542877 CEP295Q9C0D2 2601 aa8.88□□□□□ -0.99
TNC-212ENST00000542877 EPM2AB3EWF7 344 aa8.87□□□□□ -0.99
TNC-212ENST00000542877 COL4A2P08572 1712 aa8.87□□□□□ -0.99
TNC-212ENST00000542877 PHF5AQ7RTV0 110 aaKnown RBP8.87□□□□□ -0.99
TNC-212ENST00000542877 SPACA4Q8TDM5 124 aa8.87□□□□□ -0.99
TNC-212ENST00000542877 SRCAPQ6ZRS2 3230 aa8.86□□□□□ -0.99
TNC-212ENST00000542877 VPREB1P12018 145 aa8.86□□□□□ -0.99
TNC-212ENST00000542877 Q6ZRP5 223 aa8.84□□□□□ -0.99
TNC-212ENST00000542877 LINC00313P59037 77 aa8.83□□□□□ -1
TNC-212ENST00000542877 RPL37AP61513 92 aaKnown RBP8.82□□□□□ -1
TNC-212ENST00000542877 LINC00588Q9Y4M8 146 aa8.82□□□□□ -1
TNC-212ENST00000542877 LOC101927531A0A1B0GV80 90 aa8.81□□□□□ -1
TNC-212ENST00000542877 A8MWP4 228 aa8.81□□□□□ -1
TNC-212ENST00000542877 ATP11AUNQ6ZP68 121 aa8.8□□□□□ -1
TNC-212ENST00000542877 NBDYA0A0U1RRE5 68 aa8.79□□□□□ -1
TNC-212ENST00000542877 DNAH10OSP0CZ25 163 aa8.79□□□□□ -1
TNC-212ENST00000542877 KCNQ1DNQ9H478 68 aa8.79□□□□□ -1
TNC-212ENST00000542877 K7EQZ3 153 aa8.79□□□□□ -1
TNC-212ENST00000542877 RTL8CO15255 209 aa8.78□□□□□ -1
TNC-212ENST00000542877 CHD8Q9HCK8 2581 aa8.78□□□□□ -1
TNC-212ENST00000542877 LINC00528Q8N1L1 170 aa8.78□□□□□ -1
TNC-212ENST00000542877 C8orf87E5RJ46 101 aa8.77□□□□□ -1.01
TNC-212ENST00000542877 IGLV1-50A0A075B6I6 118 aa8.77□□□□□ -1.01
TNC-212ENST00000542877 EIF4EBP3O60516 100 aaPredicted RBP8.77□□□□□ -1.01
TNC-212ENST00000542877 CSNK1G2-AS1Q8NCQ2 148 aa8.76□□□□□ -1.01
TNC-212ENST00000542877 CYP4F30PQ9H0H9 118 aa8.76□□□□□ -1.01
TNC-212ENST00000542877 KLKP1Q107X0 134 aa8.76□□□□□ -1.01
TNC-212ENST00000542877 FAM229AH3BQW9 127 aa8.75□□□□□ -1.01
TNC-212ENST00000542877 SERTAD4-AS1Q5TG53 156 aa8.75□□□□□ -1.01
TNC-212ENST00000542877 MRPL34Q9BQ48 92 aaKnown RBP8.75□□□□□ -1.01
TNC-212ENST00000542877 CHTF8P0CG12 524 aa8.74□□□□□ -1.01
TNC-212ENST00000542877 MTORP42345 2549 aa8.74□□□□□ -1.01
TNC-212ENST00000542877 ZNF462Q96JM2 2506 aa8.74□□□□□ -1.01
TNC-212ENST00000542877 PCSK5Q92824 1860 aa8.74□□□□□ -1.01
TNC-212ENST00000542877 FAM168BA1KXE4 195 aa8.74□□□□□ -1.01
TNC-212ENST00000542877 COA5Q86WW8 74 aa8.73□□□□□ -1.01
TNC-212ENST00000542877 TYMSOSQ8TAI1 123 aa8.73□□□□□ -1.01
TNC-212ENST00000542877 KRTAP24-1Q3LI83 254 aa8.72□□□□□ -1.01
TNC-212ENST00000542877 A8MUN3 132 aa8.72□□□□□ -1.01
TNC-212ENST00000542877 PRR34Q9NV39 138 aa8.72□□□□□ -1.01
TNC-212ENST00000542877 EP400Q96L91 3159 aa8.71□□□□□ -1.02
TNC-212ENST00000542877 IGFL1Q6UW32 110 aa8.7□□□□□ -1.02
TNC-212ENST00000542877 PRR15Q8IV56 129 aa8.68□□□□□ -1.02
TNC-212ENST00000542877 Q96NJ1 140 aa8.68□□□□□ -1.02
TNC-212ENST00000542877 IGLV8-61A0A075B6I0 122 aa8.67□□□□□ -1.02
TNC-212ENST00000542877 SPTBN4Q9H254 2564 aa8.67□□□□□ -1.02
TNC-212ENST00000542877 CENPFP49454 3210 aa8.67□□□□□ -1.02
TNC-212ENST00000542877 ANKRD17O75179 2603 aaKnown RBP8.66□□□□□ -1.02
TNC-212ENST00000542877 Q8N377 158 aa8.66□□□□□ -1.02
TNC-212ENST00000542877 C15orf56Q8N910 161 aa8.66□□□□□ -1.02
TNC-212ENST00000542877 LINC01600Q96MT4 127 aa8.65□□□□□ -1.02
TNC-212ENST00000542877 UQCR11O14957 56 aa8.65□□□□□ -1.02
TNC-212ENST00000542877 C8orf17Q9NRJ1 99 aa8.65□□□□□ -1.02
TNC-212ENST00000542877 H7BZZ5 65 aa8.65□□□□□ -1.02
TNC-212ENST00000542877 LINC00612Q8N6U2 182 aa8.65□□□□□ -1.03
TNC-212ENST00000542877 PLA2G2DQ9UNK4 145 aa8.64□□□□□ -1.03
TNC-212ENST00000542877 GIG44P09565 113 aaPredicted RBP8.63□□□□□ -1.03
TNC-212ENST00000542877 C9orf129Q5T035 196 aaKnown RBP8.63□□□□□ -1.03
TNC-212ENST00000542877 POLQO75417 2590 aa8.63□□□□□ -1.03
TNC-212ENST00000542877 TLX1NBP0CAT3 122 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms