RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 COX17Q14061 63 aa10.11□□□□□ -0.79
PPP1CA-210ENST00000542876 IGLV7-46A0A075B6I9 117 aa10.1□□□□□ -0.79
PPP1CA-210ENST00000542876 IGLV5-39A0A0G2JS06 123 aa10.1□□□□□ -0.79
PPP1CA-210ENST00000542876 TMEM238C9JI98 176 aa10.1□□□□□ -0.79
PPP1CA-210ENST00000542876 CTAG1AP78358 180 aa10.1□□□□□ -0.79
PPP1CA-210ENST00000542876 TPRXLQ17RH7 258 aa10.09□□□□□ -0.79
PPP1CA-210ENST00000542876 LINC00310P59036 64 aa10.08□□□□□ -0.8
PPP1CA-210ENST00000542876 A0A096LNJ9 63 aa10.07□□□□□ -0.8
PPP1CA-210ENST00000542876 ZNF22P17026 224 aaPredicted RBP10.07□□□□□ -0.8
PPP1CA-210ENST00000542876 SFTA2Q6UW10 78 aa10.07□□□□□ -0.8
PPP1CA-210ENST00000542876 ZNF625Q96I27 306 aaPredicted RBP10.07□□□□□ -0.8
PPP1CA-210ENST00000542876 KRTAP9-2Q9BYQ4 174 aa10.07□□□□□ -0.8
PPP1CA-210ENST00000542876 M0R378 163 aa10.06□□□□□ -0.8
PPP1CA-210ENST00000542876 PLEKHB2Q96CS7 222 aa10.06□□□□□ -0.8
PPP1CA-210ENST00000542876 HIGD2AQ9BW72 106 aa10.06□□□□□ -0.8
PPP1CA-210ENST00000542876 HIST1H2BKO60814 126 aa10.05□□□□□ -0.8
PPP1CA-210ENST00000542876 HIST1H2BJP06899 126 aa10.05□□□□□ -0.8
PPP1CA-210ENST00000542876 HIST1H2BOP23527 126 aa10.05□□□□□ -0.8
PPP1CA-210ENST00000542876 HIST1H2BBP33778 126 aa10.05□□□□□ -0.8
PPP1CA-210ENST00000542876 HIST1H2BDP58876 126 aa10.05□□□□□ -0.8
PPP1CA-210ENST00000542876 HIST1H2BCP62807 126 aa10.05□□□□□ -0.8
PPP1CA-210ENST00000542876 HIST2H2BEQ16778 126 aa10.05□□□□□ -0.8
PPP1CA-210ENST00000542876 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.05□□□□□ -0.8
PPP1CA-210ENST00000542876 HIST1H2BHQ93079 126 aa10.05□□□□□ -0.8
PPP1CA-210ENST00000542876 HIST1H2BNQ99877 126 aa10.05□□□□□ -0.8
PPP1CA-210ENST00000542876 HIST1H2BMQ99879 126 aa10.05□□□□□ -0.8
PPP1CA-210ENST00000542876 FAT4Q6V0I7 4981 aa10.04□□□□□ -0.8
PPP1CA-210ENST00000542876 HBDP02042 147 aa10.04□□□□□ -0.8
PPP1CA-210ENST00000542876 LINC00614P0C842 121 aa10.04□□□□□ -0.8
PPP1CA-210ENST00000542876 TMEM170BQ5T4T1 132 aa10.03□□□□□ -0.8
PPP1CA-210ENST00000542876 LCE2AQ5TA79 106 aaPredicted RBP10.03□□□□□ -0.8
PPP1CA-210ENST00000542876 SPAG11AQ6PDA7 123 aa10.03□□□□□ -0.8
PPP1CA-210ENST00000542876 LINC00158P58513 81 aa10.02□□□□□ -0.81
PPP1CA-210ENST00000542876 BAGE3Q86Y29 109 aa10.02□□□□□ -0.81
PPP1CA-210ENST00000542876 C3orf22Q8N5N4 141 aa10.02□□□□□ -0.81
PPP1CA-210ENST00000542876 C4orf48Q5BLP8 95 aa10.01□□□□□ -0.81
PPP1CA-210ENST00000542876 CHCHD1Q96BP2 118 aaKnown RBP10.01□□□□□ -0.81
PPP1CA-210ENST00000542876 PPDPFQ9H3Y8 114 aa10.01□□□□□ -0.81
PPP1CA-210ENST00000542876 C11orf86A6NJI1 115 aa10□□□□□ -0.81
PPP1CA-210ENST00000542876 SERF1AO75920 110 aa10□□□□□ -0.81
PPP1CA-210ENST00000542876 Q8NDZ9 215 aa10□□□□□ -0.81
PPP1CA-210ENST00000542876 ZNF706Q9Y5V0 76 aaPredicted RBP10□□□□□ -0.81
PPP1CA-210ENST00000542876 PMCHL1Q16048 86 aa9.99□□□□□ -0.81
PPP1CA-210ENST00000542876 COA6Q5JTJ3 125 aaKnown RBP9.98□□□□□ -0.81
PPP1CA-210ENST00000542876 SPRR4Q96PI1 79 aa9.98□□□□□ -0.81
PPP1CA-210ENST00000542876 MUC17Q685J3 4493 aa9.97□□□□□ -0.81
PPP1CA-210ENST00000542876 A0A0U1RRA0 63 aa9.97□□□□□ -0.81
PPP1CA-210ENST00000542876 FP248Q71RG6 208 aaPredicted RBP9.96□□□□□ -0.82
PPP1CA-210ENST00000542876 CHTOPQ9Y3Y2 248 aaKnown RBP9.96□□□□□ -0.82
PPP1CA-210ENST00000542876 LINC00337Q8N6G1 96 aa9.95□□□□□ -0.82
PPP1CA-210ENST00000542876 FAM19A2Q8N3H0 131 aa9.94□□□□□ -0.82
PPP1CA-210ENST00000542876 PRYO14603 147 aa9.93□□□□□ -0.82
PPP1CA-210ENST00000542876 HSBP1O75506 76 aa9.93□□□□□ -0.82
PPP1CA-210ENST00000542876 BOD1L2Q8IYS8 172 aa9.93□□□□□ -0.82
PPP1CA-210ENST00000542876 MEIG1Q5JSS6 88 aa9.92□□□□□ -0.82
PPP1CA-210ENST00000542876 Q8NBF4 154 aa9.92□□□□□ -0.82
PPP1CA-210ENST00000542876 ETDCA0A1B0GVM5 59 aa9.91□□□□□ -0.82
PPP1CA-210ENST00000542876 TMEM223A0PJW6 202 aa9.91□□□□□ -0.82
PPP1CA-210ENST00000542876 SMIM13P0DJ93 91 aa9.91□□□□□ -0.82
PPP1CA-210ENST00000542876 DAND5Q8N907 189 aa9.91□□□□□ -0.82
PPP1CA-210ENST00000542876 S100A12P80511 92 aa9.9□□□□□ -0.82
PPP1CA-210ENST00000542876 TRAV12-1A0A0B4J245 112 aa9.89□□□□□ -0.83
PPP1CA-210ENST00000542876 LINC00587B1AMM8 73 aa9.89□□□□□ -0.83
PPP1CA-210ENST00000542876 NCR3O14931 201 aa9.89□□□□□ -0.83
PPP1CA-210ENST00000542876 SPINK1P00995 79 aa9.89□□□□□ -0.83
PPP1CA-210ENST00000542876 HERV-K104P63124 156 aa9.89□□□□□ -0.83
PPP1CA-210ENST00000542876 SMCR5Q8TEV8 140 aa9.89□□□□□ -0.83
PPP1CA-210ENST00000542876 KCNQ1DNQ9H478 68 aa9.89□□□□□ -0.83
PPP1CA-210ENST00000542876 MIR7-3HGQ8N6C7 128 aa9.88□□□□□ -0.83
PPP1CA-210ENST00000542876 SPRR1AP35321 89 aa9.87□□□□□ -0.83
PPP1CA-210ENST00000542876 IFI27L1Q96BM0 104 aa9.87□□□□□ -0.83
PPP1CA-210ENST00000542876 KRTAP13-3Q3SY46 172 aa9.86□□□□□ -0.83
PPP1CA-210ENST00000542876 MAP1LC3CQ9BXW4 147 aa9.86□□□□□ -0.83
PPP1CA-210ENST00000542876 NDUFA12Q9UI09 145 aa9.86□□□□□ -0.83
PPP1CA-210ENST00000542876 TRBV10-3A0A0K0K1G6 114 aa9.85□□□□□ -0.83
PPP1CA-210ENST00000542876 LEPROTL1O95214 131 aa9.85□□□□□ -0.83
PPP1CA-210ENST00000542876 GAGE2AQ6NT46 116 aa9.84□□□□□ -0.83
PPP1CA-210ENST00000542876 MYMXA0A1B0GTQ4 84 aa9.83□□□□□ -0.84
PPP1CA-210ENST00000542876 KRTAP4-16G5E9R7 235 aaPredicted RBP9.83□□□□□ -0.84
PPP1CA-210ENST00000542876 ASB16-AS1Q495Z4 193 aa9.83□□□□□ -0.84
PPP1CA-210ENST00000542876 LINC00483Q53H64 154 aa9.83□□□□□ -0.84
PPP1CA-210ENST00000542876 KRTAP9-6A0A140TA67 174 aa9.82□□□□□ -0.84
PPP1CA-210ENST00000542876 FABP4P15090 132 aa9.82□□□□□ -0.84
PPP1CA-210ENST00000542876 HIST3H2BBQ8N257 126 aa9.82□□□□□ -0.84
PPP1CA-210ENST00000542876 IGLV9-49A0A0B4J1Y8 123 aa9.81□□□□□ -0.84
PPP1CA-210ENST00000542876 LINC01547P58512 204 aaPredicted RBP9.81□□□□□ -0.84
PPP1CA-210ENST00000542876 SEC61BP60468 96 aaKnown RBP9.81□□□□□ -0.84
PPP1CA-210ENST00000542876 HSPB8Q9UJY1 196 aa9.81□□□□□ -0.84
PPP1CA-210ENST00000542876 C5orf52A6NGY3 159 aa9.8□□□□□ -0.84
PPP1CA-210ENST00000542876 MOBPQ13875 183 aa9.8□□□□□ -0.84
PPP1CA-210ENST00000542876 SSBP3-AS1Q7Z2R9 100 aa9.8□□□□□ -0.84
PPP1CA-210ENST00000542876 B5MCH6 92 aa9.79□□□□□ -0.84
PPP1CA-210ENST00000542876 DDTP30046 118 aa9.79□□□□□ -0.84
PPP1CA-210ENST00000542876 RPS29P62273 56 aaKnown RBP9.79□□□□□ -0.84
PPP1CA-210ENST00000542876 HIST1H2BLQ99880 126 aa9.78□□□□□ -0.84
PPP1CA-210ENST00000542876 H0Y8G0 127 aa9.77□□□□□ -0.85
PPP1CA-210ENST00000542876 SNRPEP62304 92 aaKnown RBP9.77□□□□□ -0.85
PPP1CA-210ENST00000542876 MIEN1Q9BRT3 115 aa9.77□□□□□ -0.85
PPP1CA-210ENST00000542876 TRBV10-2A0A0K0K1G8 114 aa9.76□□□□□ -0.85
PPP1CA-210ENST00000542876 SYS1-DBNDD2H3BUS1 97 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms