RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 LINC00587B1AMM8 73 aa10.36□□□□□ -0.75
LTBR-210ENST00000542830 ATP6V1G1O75348 118 aa10.36□□□□□ -0.75
LTBR-210ENST00000542830 SERF1AO75920 110 aa10.36□□□□□ -0.75
LTBR-210ENST00000542830 SLC7A5P1Q8MH63 180 aa10.36□□□□□ -0.75
LTBR-210ENST00000542830 MEIG1Q5JSS6 88 aa10.35□□□□□ -0.75
LTBR-210ENST00000542830 TMEM126AQ9H061 195 aa10.35□□□□□ -0.75
LTBR-210ENST00000542830 HSPB8Q9UJY1 196 aa10.35□□□□□ -0.75
LTBR-210ENST00000542830 A0A0U1RRA0 63 aa10.34□□□□□ -0.75
LTBR-210ENST00000542830 H0Y8G0 127 aa10.34□□□□□ -0.75
LTBR-210ENST00000542830 FAM19A1Q7Z5A9 133 aa10.34□□□□□ -0.75
LTBR-210ENST00000542830 Q8NDZ9 215 aa10.34□□□□□ -0.75
LTBR-210ENST00000542830 A0A087X002 238 aa10.33□□□□□ -0.76
LTBR-210ENST00000542830 TMEM238C9JI98 176 aa10.33□□□□□ -0.76
LTBR-210ENST00000542830 SMIM13P0DJ93 91 aa10.33□□□□□ -0.76
LTBR-210ENST00000542830 LINC00310P59036 64 aa10.33□□□□□ -0.76
LTBR-210ENST00000542830 NDUFA12Q9UI09 145 aa10.33□□□□□ -0.76
LTBR-210ENST00000542830 MYMXA0A1B0GTQ4 84 aa10.32□□□□□ -0.76
LTBR-210ENST00000542830 COLCA2A8K830 154 aa10.32□□□□□ -0.76
LTBR-210ENST00000542830 M0R378 163 aa10.32□□□□□ -0.76
LTBR-210ENST00000542830 PLNP26678 52 aa10.32□□□□□ -0.76
LTBR-210ENST00000542830 PRLHP81277 87 aa10.32□□□□□ -0.76
LTBR-210ENST00000542830 TYMSOSQ8TAI1 123 aa10.32□□□□□ -0.76
LTBR-210ENST00000542830 FAM229BQ4G0N7 80 aa10.31□□□□□ -0.76
LTBR-210ENST00000542830 MAP1LC3CQ9BXW4 147 aa10.31□□□□□ -0.76
LTBR-210ENST00000542830 MIR7-3HGQ8N6C7 128 aa10.3□□□□□ -0.76
LTBR-210ENST00000542830 PLEKHB2Q96CS7 222 aa10.3□□□□□ -0.76
LTBR-210ENST00000542830 LEPROTO15243 131 aa10.29□□□□□ -0.76
LTBR-210ENST00000542830 FABP4P15090 132 aa10.29□□□□□ -0.76
LTBR-210ENST00000542830 HERVK_113P61574 105 aa10.29□□□□□ -0.76
LTBR-210ENST00000542830 BOD1L2Q8IYS8 172 aa10.29□□□□□ -0.76
LTBR-210ENST00000542830 DPM2O94777 84 aa10.28□□□□□ -0.76
LTBR-210ENST00000542830 ANAPC11Q9NYG5 84 aa10.28□□□□□ -0.76
LTBR-210ENST00000542830 IGKV2D-26A0A0A0MRZ7 120 aa10.27□□□□□ -0.77
LTBR-210ENST00000542830 PRYO14603 147 aa10.26□□□□□ -0.77
LTBR-210ENST00000542830 IGKCP01834 107 aa10.26□□□□□ -0.77
LTBR-210ENST00000542830 PRR4Q16378 134 aa10.26□□□□□ -0.77
LTBR-210ENST00000542830 J3QQQ9 107 aa10.25□□□□□ -0.77
LTBR-210ENST00000542830 TSPAN13O95857 204 aa10.25□□□□□ -0.77
LTBR-210ENST00000542830 NMUP48645 174 aa10.25□□□□□ -0.77
LTBR-210ENST00000542830 TSPEAR-AS2P59090 65 aa10.25□□□□□ -0.77
LTBR-210ENST00000542830 KRTAP13-2Q52LG2 175 aa10.25□□□□□ -0.77
LTBR-210ENST00000542830 LPAP08519 4548 aa10.25□□□□□ -0.77
LTBR-210ENST00000542830 HIGD2AQ9BW72 106 aa10.24□□□□□ -0.77
LTBR-210ENST00000542830 NCR3O14931 201 aa10.23□□□□□ -0.77
LTBR-210ENST00000542830 LGALS3P17931 250 aaKnown RBP10.23□□□□□ -0.77
LTBR-210ENST00000542830 PMCHL2Q9BQD1 86 aa10.23□□□□□ -0.77
LTBR-210ENST00000542830 LOC107984156A0A0G2JMH3 177 aa10.22□□□□□ -0.77
LTBR-210ENST00000542830 S100A12P80511 92 aa10.22□□□□□ -0.77
LTBR-210ENST00000542830 ARL17AQ8IVW1 177 aa10.22□□□□□ -0.77
LTBR-210ENST00000542830 KCNQ1DNQ9H478 68 aa10.22□□□□□ -0.77
LTBR-210ENST00000542830 RNF213Q63HN8 5207 aa10.22□□□□□ -0.77
LTBR-210ENST00000542830 LINC00337Q8N6G1 96 aa10.21□□□□□ -0.77
LTBR-210ENST00000542830 SPRR1AP35321 89 aa10.2□□□□□ -0.78
LTBR-210ENST00000542830 LINC00304Q8N9R0 145 aa10.2□□□□□ -0.78
LTBR-210ENST00000542830 ZNF706Q9Y5V0 76 aaPredicted RBP10.2□□□□□ -0.78
LTBR-210ENST00000542830 TRBV10-2A0A0K0K1G8 114 aa10.19□□□□□ -0.78
LTBR-210ENST00000542830 CTAG1AP78358 180 aa10.19□□□□□ -0.78
LTBR-210ENST00000542830 DAND5Q8N907 189 aa10.19□□□□□ -0.78
LTBR-210ENST00000542830 MIEN1Q9BRT3 115 aa10.19□□□□□ -0.78
LTBR-210ENST00000542830 TRBV10-3A0A0K0K1G6 114 aa10.18□□□□□ -0.78
LTBR-210ENST00000542830 ETDCA0A1B0GVM5 59 aa10.18□□□□□ -0.78
LTBR-210ENST00000542830 HIST1H2BKO60814 126 aa10.18□□□□□ -0.78
LTBR-210ENST00000542830 HIST1H2BJP06899 126 aa10.18□□□□□ -0.78
LTBR-210ENST00000542830 HIST1H2BOP23527 126 aa10.18□□□□□ -0.78
LTBR-210ENST00000542830 HIST1H2BBP33778 126 aa10.18□□□□□ -0.78
LTBR-210ENST00000542830 HIST1H2BDP58876 126 aa10.18□□□□□ -0.78
LTBR-210ENST00000542830 HIST1H2BCP62807 126 aa10.18□□□□□ -0.78
LTBR-210ENST00000542830 HIST2H2BEQ16778 126 aa10.18□□□□□ -0.78
LTBR-210ENST00000542830 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.18□□□□□ -0.78
LTBR-210ENST00000542830 HIST1H2BHQ93079 126 aa10.18□□□□□ -0.78
LTBR-210ENST00000542830 SPRR4Q96PI1 79 aa10.18□□□□□ -0.78
LTBR-210ENST00000542830 HIST1H2BNQ99877 126 aa10.18□□□□□ -0.78
LTBR-210ENST00000542830 HIST1H2BMQ99879 126 aa10.18□□□□□ -0.78
LTBR-210ENST00000542830 E9PLD3 99 aa10.17□□□□□ -0.78
LTBR-210ENST00000542830 KRTAP4-16G5E9R7 235 aaPredicted RBP10.16□□□□□ -0.78
LTBR-210ENST00000542830 SYS1-DBNDD2H3BUS1 97 aa10.16□□□□□ -0.78
LTBR-210ENST00000542830 SPANXB1Q9NS25 103 aaPredicted RBP10.16□□□□□ -0.78
LTBR-210ENST00000542830 NDUFC2O95298 119 aa10.15□□□□□ -0.78
LTBR-210ENST00000542830 DDTP30046 118 aa10.15□□□□□ -0.78
LTBR-210ENST00000542830 A0A0J9YXY3 114 aa10.13□□□□□ -0.79
LTBR-210ENST00000542830 C3orf22Q8N5N4 141 aa10.13□□□□□ -0.79
LTBR-210ENST00000542830 SMCR5Q8TEV8 140 aa10.13□□□□□ -0.79
LTBR-210ENST00000542830 PET117Q6UWS5 81 aa10.12□□□□□ -0.79
LTBR-210ENST00000542830 S100A7L2Q5SY68 101 aa10.11□□□□□ -0.79
LTBR-210ENST00000542830 LINC01545Q5VT33 79 aa10.11□□□□□ -0.79
LTBR-210ENST00000542830 SPAG11AQ6PDA7 123 aa10.11□□□□□ -0.79
LTBR-210ENST00000542830 B5MCH6 92 aa10.1□□□□□ -0.79
LTBR-210ENST00000542830 IGLV6-57P01721 117 aa10.09□□□□□ -0.79
LTBR-210ENST00000542830 ADAMTSL4-AS1Q5T5F5 129 aa10.08□□□□□ -0.8
LTBR-210ENST00000542830 SOSTDC1Q6X4U4 206 aa10.08□□□□□ -0.8
LTBR-210ENST00000542830 NPC2P61916 151 aa10.07□□□□□ -0.8
LTBR-210ENST00000542830 LINC00483Q53H64 154 aa10.07□□□□□ -0.8
LTBR-210ENST00000542830 COA6Q5JTJ3 125 aaKnown RBP10.07□□□□□ -0.8
LTBR-210ENST00000542830 Q6ZRX8 168 aa10.07□□□□□ -0.8
LTBR-210ENST00000542830 RETNLBQ9BQ08 111 aa10.07□□□□□ -0.8
LTBR-210ENST00000542830 CBY1Q9Y3M2 126 aa10.07□□□□□ -0.8
LTBR-210ENST00000542830 TRAV23DV6A0A075B6W5 121 aa10.06□□□□□ -0.8
LTBR-210ENST00000542830 TIMM17BO60830 172 aa10.06□□□□□ -0.8
LTBR-210ENST00000542830 C4orf48Q5BLP8 95 aa10.06□□□□□ -0.8
LTBR-210ENST00000542830 PPDPFQ9H3Y8 114 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms