RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 IGKV2D-28P01615 120 aa8.57□□□□□ -1.04
CHFR-221ENST00000542714 XAGE1AQ9HD64 81 aa8.57□□□□□ -1.04
CHFR-221ENST00000542714 SACSQ9NZJ4 4579 aa8.57□□□□□ -1.04
CHFR-221ENST00000542714 HYDINQ4G0P3 5121 aa8.56□□□□□ -1.04
CHFR-221ENST00000542714 RTL8CO15255 209 aa8.56□□□□□ -1.04
CHFR-221ENST00000542714 RPL18AQ02543 176 aaKnown RBP8.55□□□□□ -1.04
CHFR-221ENST00000542714 GAGE2EQ4V326 116 aa8.55□□□□□ -1.04
CHFR-221ENST00000542714 C9orf129Q5T035 196 aaKnown RBP8.55□□□□□ -1.04
CHFR-221ENST00000542714 GAGE2DQ9UEU5 116 aa8.55□□□□□ -1.04
CHFR-221ENST00000542714 TNP2Q05952 138 aa8.54□□□□□ -1.04
CHFR-221ENST00000542714 LINC00337Q8N6G1 96 aa8.54□□□□□ -1.04
CHFR-221ENST00000542714 NAA38Q9BRA0 125 aaKnown RBP8.54□□□□□ -1.04
CHFR-221ENST00000542714 PRO1854Q9UHT4 67 aa8.54□□□□□ -1.04
CHFR-221ENST00000542714 LOC107984640A0A0U1RRK4 108 aa8.53□□□□□ -1.04
CHFR-221ENST00000542714 C9orf118A6NHY6 69 aa8.53□□□□□ -1.04
CHFR-221ENST00000542714 NDUFC2O95298 119 aa8.53□□□□□ -1.04
CHFR-221ENST00000542714 TSPAN13O95857 204 aa8.53□□□□□ -1.04
CHFR-221ENST00000542714 PRR3P79522 188 aaKnown RBP8.53□□□□□ -1.04
CHFR-221ENST00000542714 PGPEP1Q9NXJ5 209 aa8.53□□□□□ -1.04
CHFR-221ENST00000542714 A0A1B0GV90 55 aa8.52□□□□□ -1.05
CHFR-221ENST00000542714 RPL13AP40429 203 aaKnown RBP8.52□□□□□ -1.05
CHFR-221ENST00000542714 C9orf163Q8N9P6 203 aa8.52□□□□□ -1.05
CHFR-221ENST00000542714 H3BUT2 72 aa8.51□□□□□ -1.05
CHFR-221ENST00000542714 VPREB1P12018 145 aa8.51□□□□□ -1.05
CHFR-221ENST00000542714 FUSP35637 526 aaKnown RBP eCLIP8.51□□□□□ -1.05
CHFR-221ENST00000542714 GAGE2BQ13066 116 aa8.51□□□□□ -1.05
CHFR-221ENST00000542714 FRAS1Q86XX4 4008 aa8.51□□□□□ -1.05
CHFR-221ENST00000542714 A0A096LNI7 61 aa8.5□□□□□ -1.05
CHFR-221ENST00000542714 NCR3O14931 201 aa8.5□□□□□ -1.05
CHFR-221ENST00000542714 LINC01620Q4KN68 170 aa8.5□□□□□ -1.05
CHFR-221ENST00000542714 TRAV13-2A0A0B4J235 113 aa8.49□□□□□ -1.05
CHFR-221ENST00000542714 H7C2G1 150 aa8.49□□□□□ -1.05
CHFR-221ENST00000542714 SERTAD4-AS1Q5TG53 156 aa8.49□□□□□ -1.05
CHFR-221ENST00000542714 KRTAP7-1Q8IUC3 87 aa8.49□□□□□ -1.05
CHFR-221ENST00000542714 PLA2G2DQ9UNK4 145 aa8.49□□□□□ -1.05
CHFR-221ENST00000542714 FAM168BA1KXE4 195 aa8.48□□□□□ -1.05
CHFR-221ENST00000542714 C16orf90A8MZG2 172 aa8.48□□□□□ -1.05
CHFR-221ENST00000542714 SDIM1Q6ZPB5 146 aa8.48□□□□□ -1.05
CHFR-221ENST00000542714 TRBV10-2A0A0K0K1G8 114 aa8.47□□□□□ -1.05
CHFR-221ENST00000542714 A0A1W2PPM0 123 aa8.47□□□□□ -1.05
CHFR-221ENST00000542714 DNAH11Q96DT5 4516 aa8.47□□□□□ -1.05
CHFR-221ENST00000542714 IGLV5-37A0A075B6J1 123 aa8.46□□□□□ -1.06
CHFR-221ENST00000542714 CHTF8P0CG12 524 aa8.46□□□□□ -1.06
CHFR-221ENST00000542714 Q1RN00 199 aa8.46□□□□□ -1.06
CHFR-221ENST00000542714 IGKV2-24A0A0C4DH68 120 aa8.45□□□□□ -1.06
CHFR-221ENST00000542714 TRIAP1O43715 76 aa8.45□□□□□ -1.06
CHFR-221ENST00000542714 KRTAP10-2P60368 255 aa8.45□□□□□ -1.06
CHFR-221ENST00000542714 OR13C6PQ8NH95 151 aa8.45□□□□□ -1.06
CHFR-221ENST00000542714 FAT2Q9NYQ8 4349 aa8.45□□□□□ -1.06
CHFR-221ENST00000542714 IGLV5-52A0A0A0MRZ9 124 aa8.44□□□□□ -1.06
CHFR-221ENST00000542714 PANO1I0J062 215 aa8.44□□□□□ -1.06
CHFR-221ENST00000542714 M0R378 163 aa8.44□□□□□ -1.06
CHFR-221ENST00000542714 IGLV6-57P01721 117 aa8.44□□□□□ -1.06
CHFR-221ENST00000542714 SMIM11BQ8TCY0 68 aa8.44□□□□□ -1.06
CHFR-221ENST00000542714 PKIGQ9Y2B9 76 aa8.44□□□□□ -1.06
CHFR-221ENST00000542714 TRBV10-3A0A0K0K1G6 114 aa8.43□□□□□ -1.06
CHFR-221ENST00000542714 A0A1W2PNN7 141 aa8.43□□□□□ -1.06
CHFR-221ENST00000542714 RPL28P46779 137 aaKnown RBP8.42□□□□□ -1.06
CHFR-221ENST00000542714 PSMB2P49721 201 aa8.42□□□□□ -1.06
CHFR-221ENST00000542714 FAM19A5Q7Z5A7 132 aaPredicted RBP8.42□□□□□ -1.06
CHFR-221ENST00000542714 C7orf33Q8WU49 177 aa8.42□□□□□ -1.06
CHFR-221ENST00000542714 RYR2Q92736 4967 aa8.42□□□□□ -1.06
CHFR-221ENST00000542714 FABP2P12104 132 aa8.41□□□□□ -1.06
CHFR-221ENST00000542714 S100A7L2Q5SY68 101 aa8.41□□□□□ -1.06
CHFR-221ENST00000542714 NKAPP1Q8N9T2 125 aa8.41□□□□□ -1.06
CHFR-221ENST00000542714 TMEM126AQ9H061 195 aa8.41□□□□□ -1.06
CHFR-221ENST00000542714 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.41□□□□□ -1.06
CHFR-221ENST00000542714 VAMP3Q15836 100 aa8.4□□□□□ -1.06
CHFR-221ENST00000542714 SPACA4Q8TDM5 124 aa8.4□□□□□ -1.06
CHFR-221ENST00000542714 C22orf24Q9Y442 160 aa8.4□□□□□ -1.06
CHFR-221ENST00000542714 SPCS1Q9Y6A9 102 aa8.4□□□□□ -1.06
CHFR-221ENST00000542714 HECTD4Q9Y4D8 3996 aa8.39□□□□□ -1.07
CHFR-221ENST00000542714 GAGE10A6NGK3 116 aa8.39□□□□□ -1.07
CHFR-221ENST00000542714 K7EP34 96 aa8.39□□□□□ -1.07
CHFR-221ENST00000542714 PKD1P98161 4303 aa8.38□□□□□ -1.07
CHFR-221ENST00000542714 TCL1BO95988 128 aa8.38□□□□□ -1.07
CHFR-221ENST00000542714 DNAH5Q8TE73 4624 aa8.38□□□□□ -1.07
CHFR-221ENST00000542714 EPM2AB3EWF7 344 aa8.37□□□□□ -1.07
CHFR-221ENST00000542714 M0QXV9 152 aa8.37□□□□□ -1.07
CHFR-221ENST00000542714 SCGB1C2P0DMR2 95 aa8.37□□□□□ -1.07
CHFR-221ENST00000542714 LYRM7Q5U5X0 104 aa8.37□□□□□ -1.07
CHFR-221ENST00000542714 LINC00336Q6ZUF6 198 aa8.37□□□□□ -1.07
CHFR-221ENST00000542714 MRPL55Q7Z7F7 128 aaKnown RBP8.37□□□□□ -1.07
CHFR-221ENST00000542714 CLEC2BQ92478 149 aa8.37□□□□□ -1.07
CHFR-221ENST00000542714 LINC00167Q96N53 147 aa8.37□□□□□ -1.07
CHFR-221ENST00000542714 LINC00474Q9P2X8 69 aa8.37□□□□□ -1.07
CHFR-221ENST00000542714 TRAV23DV6A0A075B6W5 121 aa8.36□□□□□ -1.07
CHFR-221ENST00000542714 DNAH8Q96JB1 4490 aa8.35□□□□□ -1.07
CHFR-221ENST00000542714 IGLV1-50A0A075B6I6 118 aa8.35□□□□□ -1.07
CHFR-221ENST00000542714 A0A1B0GVY2 172 aa8.35□□□□□ -1.07
CHFR-221ENST00000542714 COX6CP09669 75 aa8.35□□□□□ -1.07
CHFR-221ENST00000542714 FAM218AQ96MZ4 157 aa8.35□□□□□ -1.07
CHFR-221ENST00000542714 RPL37AP8A6NKH3 93 aa8.34□□□□□ -1.07
CHFR-221ENST00000542714 C6orf99Q4VX62 202 aa8.34□□□□□ -1.07
CHFR-221ENST00000542714 PHF5AQ7RTV0 110 aaKnown RBP8.34□□□□□ -1.07
CHFR-221ENST00000542714 KCNQ1DNQ9H478 68 aa8.34□□□□□ -1.07
CHFR-221ENST00000542714 KMT2CQ8NEZ4 4911 aaKnown RBP8.34□□□□□ -1.07
CHFR-221ENST00000542714 A0A087WYN8 130 aa8.33□□□□□ -1.08
CHFR-221ENST00000542714 ZNF73O43830 326 aaPredicted RBP8.33□□□□□ -1.08
CHFR-221ENST00000542714 KRTAP10-1P60331 282 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 161.8 ms