RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 CIRBP-AS1Q8TBR5 109 aa14.63□□□□□ -0.07
HOMER3-205ENST00000542541 COPS9Q8WXC6 57 aa14.63□□□□□ -0.07
HOMER3-205ENST00000542541 PLA2G2DQ9UNK4 145 aa14.63□□□□□ -0.07
HOMER3-205ENST00000542541 A0A1W2PNN7 141 aa14.62□□□□□ -0.07
HOMER3-205ENST00000542541 RPL24P83731 157 aaKnown RBP14.62□□□□□ -0.07
HOMER3-205ENST00000542541 C12orf57Q99622 126 aa14.62□□□□□ -0.07
HOMER3-205ENST00000542541 TP73-AS1Q9UF72 201 aa14.62□□□□□ -0.07
HOMER3-205ENST00000542541 SRSF9Q13242 221 aaKnown RBP eCLIP14.61□□□□□ -0.07
HOMER3-205ENST00000542541 FAM168BA1KXE4 195 aa14.6□□□□□ -0.07
HOMER3-205ENST00000542541 CDK2AP2O75956 126 aa14.6□□□□□ -0.07
HOMER3-205ENST00000542541 SPANXB1Q9NS25 103 aaPredicted RBP14.6□□□□□ -0.07
HOMER3-205ENST00000542541 DNAH8Q96JB1 4490 aa14.6□□□□□ -0.07
HOMER3-205ENST00000542541 IFITM1P13164 125 aa14.59□□□□□ -0.07
HOMER3-205ENST00000542541 FAM19A5Q7Z5A7 132 aaPredicted RBP14.59□□□□□ -0.07
HOMER3-205ENST00000542541 LINC00308Q8TCZ7 52 aa14.59□□□□□ -0.07
HOMER3-205ENST00000542541 HIGD1BQ9P298 99 aa14.59□□□□□ -0.07
HOMER3-205ENST00000542541 UQCR10Q9UDW1 63 aa14.59□□□□□ -0.07
HOMER3-205ENST00000542541 APOBP04114 4563 aaKnown RBP14.59□□□□□ -0.07
HOMER3-205ENST00000542541 EPM2AB3EWF7 344 aa14.59□□□□□ -0.07
HOMER3-205ENST00000542541 XGP55808 180 aa14.59□□□□□ -0.07
HOMER3-205ENST00000542541 NPC2P61916 151 aa14.58□□□□□ -0.08
HOMER3-205ENST00000542541 SERTAD4-AS1Q5TG53 156 aa14.57□□□□□ -0.08
HOMER3-205ENST00000542541 NKAPP1Q8N9T2 125 aa14.56□□□□□ -0.08
HOMER3-205ENST00000542541 KIAA1109Q2LD37 5005 aa14.56□□□□□ -0.08
HOMER3-205ENST00000542541 HAMPP81172 84 aa14.55□□□□□ -0.08
HOMER3-205ENST00000542541 SOSTDC1Q6X4U4 206 aa14.55□□□□□ -0.08
HOMER3-205ENST00000542541 LINC00518Q8N0U6 118 aa14.55□□□□□ -0.08
HOMER3-205ENST00000542541 PPDPFQ9H3Y8 114 aa14.55□□□□□ -0.08
HOMER3-205ENST00000542541 IGLV5-37A0A075B6J1 123 aa14.55□□□□□ -0.08
HOMER3-205ENST00000542541 VPREB1P12018 145 aa14.55□□□□□ -0.08
HOMER3-205ENST00000542541 KRTAP7-1Q8IUC3 87 aa14.55□□□□□ -0.08
HOMER3-205ENST00000542541 HIST1H4GQ99525 98 aa14.55□□□□□ -0.08
HOMER3-205ENST00000542541 M0QXV9 152 aa14.54□□□□□ -0.08
HOMER3-205ENST00000542541 C2orf91Q6ZV80 131 aa14.54□□□□□ -0.08
HOMER3-205ENST00000542541 C22orf24Q9Y442 160 aa14.54□□□□□ -0.08
HOMER3-205ENST00000542541 NDUFC2O95298 119 aa14.53□□□□□ -0.08
HOMER3-205ENST00000542541 MUSTN1Q8IVN3 82 aa14.53□□□□□ -0.08
HOMER3-205ENST00000542541 PRO1933Q9H354 126 aa14.53□□□□□ -0.08
HOMER3-205ENST00000542541 EIF4EBP3O60516 100 aaPredicted RBP14.52□□□□□ -0.08
HOMER3-205ENST00000542541 LBHQ53QV2 105 aaPredicted RBP14.52□□□□□ -0.08
HOMER3-205ENST00000542541 MRPL55Q7Z7F7 128 aaKnown RBP14.51□□□□□ -0.09
HOMER3-205ENST00000542541 Q8NDZ9 215 aa14.5□□□□□ -0.09
HOMER3-205ENST00000542541 TSTD3H0UI37 97 aa14.49□□□□□ -0.09
HOMER3-205ENST00000542541 TAL2Q16559 108 aa14.49□□□□□ -0.09
HOMER3-205ENST00000542541 PHF5AQ7RTV0 110 aaKnown RBP14.49□□□□□ -0.09
HOMER3-205ENST00000542541 C7orf33Q8WU49 177 aa14.48□□□□□ -0.09
HOMER3-205ENST00000542541 HSPG2P98160 4391 aa14.48□□□□□ -0.09
HOMER3-205ENST00000542541 M0R378 163 aa14.48□□□□□ -0.09
HOMER3-205ENST00000542541 RYR1P21817 5038 aa14.47□□□□□ -0.09
HOMER3-205ENST00000542541 TRBV10-2A0A0K0K1G8 114 aa14.47□□□□□ -0.09
HOMER3-205ENST00000542541 HNRNPA3P51991 378 aaKnown RBP14.47□□□□□ -0.09
HOMER3-205ENST00000542541 PRR3P79522 188 aaKnown RBP14.47□□□□□ -0.09
HOMER3-205ENST00000542541 NCR3O14931 201 aa14.45□□□□□ -0.1
HOMER3-205ENST00000542541 LINC00167Q96N53 147 aa14.45□□□□□ -0.1
HOMER3-205ENST00000542541 UBE2BP63146 152 aa14.44□□□□□ -0.1
HOMER3-205ENST00000542541 GAGE10A6NGK3 116 aa14.44□□□□□ -0.1
HOMER3-205ENST00000542541 SMR3BP02814 79 aaPredicted RBP14.42□□□□□ -0.1
HOMER3-205ENST00000542541 HSD52Q0P140 79 aa14.42□□□□□ -0.1
HOMER3-205ENST00000542541 A4D1N5 150 aa14.41□□□□□ -0.1
HOMER3-205ENST00000542541 S100A7L2Q5SY68 101 aa14.41□□□□□ -0.1
HOMER3-205ENST00000542541 CEND1Q8N111 149 aa14.41□□□□□ -0.1
HOMER3-205ENST00000542541 RPL37AP8A6NKH3 93 aa14.4□□□□□ -0.1
HOMER3-205ENST00000542541 LINC00528Q8N1L1 170 aa14.4□□□□□ -0.1
HOMER3-205ENST00000542541 IGKV2-28A0A075B6P5 120 aa14.39□□□□□ -0.11
HOMER3-205ENST00000542541 IGKV2D-28P01615 120 aa14.39□□□□□ -0.11
HOMER3-205ENST00000542541 IGLV1-50A0A075B6I6 118 aa14.38□□□□□ -0.11
HOMER3-205ENST00000542541 TMEM238LA0A1B0GVL6 79 aa14.37□□□□□ -0.11
HOMER3-205ENST00000542541 A6NJY4 79 aa14.37□□□□□ -0.11
HOMER3-205ENST00000542541 DDTP30046 118 aa14.37□□□□□ -0.11
HOMER3-205ENST00000542541 OR13C6PQ8NH95 151 aa14.37□□□□□ -0.11
HOMER3-205ENST00000542541 HERC2O95714 4834 aa14.36□□□□□ -0.11
HOMER3-205ENST00000542541 FAM229AH3BQW9 127 aa14.36□□□□□ -0.11
HOMER3-205ENST00000542541 TMEM126AQ9H061 195 aa14.36□□□□□ -0.11
HOMER3-205ENST00000542541 TRBV10-3A0A0K0K1G6 114 aa14.35□□□□□ -0.11
HOMER3-205ENST00000542541 CBY1Q9Y3M2 126 aa14.35□□□□□ -0.11
HOMER3-205ENST00000542541 TRAV13-2A0A0B4J235 113 aa14.34□□□□□ -0.11
HOMER3-205ENST00000542541 IGLV6-57P01721 117 aa14.34□□□□□ -0.11
HOMER3-205ENST00000542541 LINC00337Q8N6G1 96 aa14.34□□□□□ -0.11
HOMER3-205ENST00000542541 KRTAP17-1Q9BYP8 105 aa14.34□□□□□ -0.11
HOMER3-205ENST00000542541 A6NDN8 102 aa14.33□□□□□ -0.12
HOMER3-205ENST00000542541 KRTAP11-1Q8IUC1 163 aa14.33□□□□□ -0.12
HOMER3-205ENST00000542541 PSORS1C2Q9UIG4 136 aa14.33□□□□□ -0.12
HOMER3-205ENST00000542541 RPL37AP61513 92 aaKnown RBP14.32□□□□□ -0.12
HOMER3-205ENST00000542541 CTAG1AP78358 180 aa14.32□□□□□ -0.12
HOMER3-205ENST00000542541 KCNQ1DNQ9H478 68 aa14.32□□□□□ -0.12
HOMER3-205ENST00000542541 PLA2G1BP04054 148 aaKnown RBP14.3□□□□□ -0.12
HOMER3-205ENST00000542541 FXYD2P54710 66 aa14.3□□□□□ -0.12
HOMER3-205ENST00000542541 PRYO14603 147 aa14.3□□□□□ -0.12
HOMER3-205ENST00000542541 REG3GQ6UW15 175 aa14.3□□□□□ -0.12
HOMER3-205ENST00000542541 Q8N1X5 172 aa14.3□□□□□ -0.12
HOMER3-205ENST00000542541 FAT1Q14517 4588 aa14.28□□□□□ -0.12
HOMER3-205ENST00000542541 CFC1BP0CG36 223 aa14.28□□□□□ -0.12
HOMER3-205ENST00000542541 CFC1P0CG37 223 aa14.28□□□□□ -0.12
HOMER3-205ENST00000542541 C1orf137Q5JT78 98 aa14.28□□□□□ -0.12
HOMER3-205ENST00000542541 RAB37Q96AX2 223 aa14.28□□□□□ -0.12
HOMER3-205ENST00000542541 A0A0B4J2C4 111 aa14.27□□□□□ -0.12
HOMER3-205ENST00000542541 M0R143 59 aa14.27□□□□□ -0.12
HOMER3-205ENST00000542541 TRAV23DV6A0A075B6W5 121 aa14.26□□□□□ -0.13
HOMER3-205ENST00000542541 BVES-AS1Q5T3Y7 98 aa14.26□□□□□ -0.13
HOMER3-205ENST00000542541 Q5VSD8 79 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms