RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 CXCL5P42830 114 aa3.56□□□□□ -1.84
ATPAF1-212ENST00000542495 A0A1B0GX51 115 aa3.56□□□□□ -1.84
ATPAF1-212ENST00000542495 NDUFC2O95298 119 aa3.56□□□□□ -1.84
ATPAF1-212ENST00000542495 DNAL4O96015 105 aa3.56□□□□□ -1.84
ATPAF1-212ENST00000542495 XCL1P47992 114 aa3.56□□□□□ -1.84
ATPAF1-212ENST00000542495 NANOS2P60321 138 aaKnown RBP3.56□□□□□ -1.84
ATPAF1-212ENST00000542495 COX17Q14061 63 aa3.56□□□□□ -1.84
ATPAF1-212ENST00000542495 C9orf129Q5T035 196 aaKnown RBP3.56□□□□□ -1.84
ATPAF1-212ENST00000542495 CD164L2Q6UWJ8 174 aa3.56□□□□□ -1.84
ATPAF1-212ENST00000542495 KLK5Q9Y337 293 aaPredicted RBP3.56□□□□□ -1.84
ATPAF1-212ENST00000542495 LECT2O14960 151 aa3.55□□□□□ -1.84
ATPAF1-212ENST00000542495 ATP5G1P05496 136 aa3.55□□□□□ -1.84
ATPAF1-212ENST00000542495 KRTAP24-1Q3LI83 254 aa3.55□□□□□ -1.84
ATPAF1-212ENST00000542495 SS18L2Q9UHA2 77 aa3.55□□□□□ -1.84
ATPAF1-212ENST00000542495 FAM236AA0A1B0GUQ0 79 aa3.54□□□□□ -1.84
ATPAF1-212ENST00000542495 FAM236BA0A1B0GV22 79 aa3.54□□□□□ -1.84
ATPAF1-212ENST00000542495 HIST1H4AP62805 103 aaKnown RBP3.54□□□□□ -1.84
ATPAF1-212ENST00000542495 C9orf66Q5T8R8 295 aa3.54□□□□□ -1.84
ATPAF1-212ENST00000542495 GAGE2AQ6NT46 116 aa3.54□□□□□ -1.84
ATPAF1-212ENST00000542495 CHCHD10Q8WYQ3 142 aaPredicted RBP3.54□□□□□ -1.84
ATPAF1-212ENST00000542495 REG3AQ06141 175 aa3.53□□□□□ -1.84
ATPAF1-212ENST00000542495 CLPSL2Q6UWE3 100 aa3.53□□□□□ -1.84
ATPAF1-212ENST00000542495 LINC00269Q8N2A0 174 aa3.53□□□□□ -1.84
ATPAF1-212ENST00000542495 OR13C6PQ8NH95 151 aa3.53□□□□□ -1.84
ATPAF1-212ENST00000542495 MUC7Q8TAX7 377 aa3.53□□□□□ -1.84
ATPAF1-212ENST00000542495 C11orf68Q9H3H3 251 aaKnown RBP3.53□□□□□ -1.84
ATPAF1-212ENST00000542495 C14orf132Q9NPU4 83 aa3.53□□□□□ -1.84
ATPAF1-212ENST00000542495 ORMDL1Q9P0S3 153 aa3.53□□□□□ -1.84
ATPAF1-212ENST00000542495 ANK2Q01484 3957 aa3.53□□□□□ -1.84
ATPAF1-212ENST00000542495 A0A096LPF7 62 aa3.53□□□□□ -1.84
ATPAF1-212ENST00000542495 APOC4P55056 127 aa3.53□□□□□ -1.84
ATPAF1-212ENST00000542495 Q6JHZ5 121 aa3.53□□□□□ -1.84
ATPAF1-212ENST00000542495 Q8N814 137 aa3.53□□□□□ -1.84
ATPAF1-212ENST00000542495 Q8NAQ8 132 aa3.53□□□□□ -1.84
ATPAF1-212ENST00000542495 TMEM126AQ9H061 195 aa3.53□□□□□ -1.84
ATPAF1-212ENST00000542495 LINC00846Q9NV44 126 aa3.53□□□□□ -1.84
ATPAF1-212ENST00000542495 A0A0J9YWU9 116 aa3.52□□□□□ -1.85
ATPAF1-212ENST00000542495 NCR3O14931 201 aa3.52□□□□□ -1.85
ATPAF1-212ENST00000542495 SLPIP03973 132 aa3.52□□□□□ -1.85
ATPAF1-212ENST00000542495 CCKP06307 115 aa3.52□□□□□ -1.85
ATPAF1-212ENST00000542495 IGHV4-30-4P0DP06 118 aa3.52□□□□□ -1.85
ATPAF1-212ENST00000542495 MIFP14174 115 aa3.52□□□□□ -1.85
ATPAF1-212ENST00000542495 PRR3P79522 188 aaKnown RBP3.52□□□□□ -1.85
ATPAF1-212ENST00000542495 DEFB135Q30KP9 77 aa3.52□□□□□ -1.85
ATPAF1-212ENST00000542495 Q8NDZ9 215 aa3.52□□□□□ -1.85
ATPAF1-212ENST00000542495 NBEAL1Q6ZS30 2694 aa3.52□□□□□ -1.85
ATPAF1-212ENST00000542495 JMJD7-PLA2G4BH0Y9G9 81 aa3.51□□□□□ -1.85
ATPAF1-212ENST00000542495 ANGP03950 147 aaKnown RBP3.51□□□□□ -1.85
ATPAF1-212ENST00000542495 DAD1P61803 113 aa3.51□□□□□ -1.85
ATPAF1-212ENST00000542495 LELP1Q5T871 98 aa3.51□□□□□ -1.85
ATPAF1-212ENST00000542495 C3orf22Q8N5N4 141 aa3.51□□□□□ -1.85
ATPAF1-212ENST00000542495 PRR34Q9NV39 138 aa3.51□□□□□ -1.85
ATPAF1-212ENST00000542495 CELA1Q9UNI1 258 aa3.51□□□□□ -1.85
ATPAF1-212ENST00000542495 IGLV10-54A0A075B6I4 117 aa3.51□□□□□ -1.85
ATPAF1-212ENST00000542495 GVQW2A0A096LPI5 108 aaPredicted RBP3.51□□□□□ -1.85
ATPAF1-212ENST00000542495 F8WDY8 70 aa3.51□□□□□ -1.85
ATPAF1-212ENST00000542495 TMEM256-PLSCR3K7ERE1 68 aa3.51□□□□□ -1.85
ATPAF1-212ENST00000542495 UQCRQO14949 82 aa3.51□□□□□ -1.85
ATPAF1-212ENST00000542495 DEFB4AO15263 64 aa3.51□□□□□ -1.85
ATPAF1-212ENST00000542495 C9orf116Q5BN46 136 aaPredicted RBP3.51□□□□□ -1.85
ATPAF1-212ENST00000542495 LINC00526Q96FQ7 95 aa3.51□□□□□ -1.85
ATPAF1-212ENST00000542495 C2orf48Q96LS8 159 aa3.51□□□□□ -1.85
ATPAF1-212ENST00000542495 KRTAP9-3Q9BYQ3 159 aa3.51□□□□□ -1.85
ATPAF1-212ENST00000542495 ATOX1O00244 68 aa3.5□□□□□ -1.85
ATPAF1-212ENST00000542495 IGLV6-57P01721 117 aa3.5□□□□□ -1.85
ATPAF1-212ENST00000542495 SPART-AS1P0CW21 52 aa3.5□□□□□ -1.85
ATPAF1-212ENST00000542495 COX7CP15954 63 aa3.5□□□□□ -1.85
ATPAF1-212ENST00000542495 C10orf25Q5T742 122 aa3.5□□□□□ -1.85
ATPAF1-212ENST00000542495 LYPD5Q6UWN5 251 aa3.5□□□□□ -1.85
ATPAF1-212ENST00000542495 UNQ6190/PRO20217Q6UXQ8 127 aa3.5□□□□□ -1.85
ATPAF1-212ENST00000542495 LINC00575Q6W349 94 aa3.5□□□□□ -1.85
ATPAF1-212ENST00000542495 WFDC9Q8NEX5 89 aa3.5□□□□□ -1.85
ATPAF1-212ENST00000542495 RPL18AQ02543 176 aaKnown RBP3.49□□□□□ -1.85
ATPAF1-212ENST00000542495 SPAG11BQ08648 103 aa3.49□□□□□ -1.85
ATPAF1-212ENST00000542495 C6orf99Q4VX62 202 aa3.49□□□□□ -1.85
ATPAF1-212ENST00000542495 ENHOQ6UWT2 76 aa3.49□□□□□ -1.85
ATPAF1-212ENST00000542495 C6orf223Q8N319 242 aa3.49□□□□□ -1.85
ATPAF1-212ENST00000542495 IGKV3D-7A0A0C4DH55 119 aa3.48□□□□□ -1.85
ATPAF1-212ENST00000542495 CRYGAP11844 174 aa3.48□□□□□ -1.85
ATPAF1-212ENST00000542495 S100A7L2Q5SY68 101 aa3.48□□□□□ -1.85
ATPAF1-212ENST00000542495 C9orf153Q5TBE3 101 aa3.48□□□□□ -1.85
ATPAF1-212ENST00000542495 ATP5EP2Q5VTU8 51 aa3.48□□□□□ -1.85
ATPAF1-212ENST00000542495 LOC110117498A0A087WWA1 95 aa3.48□□□□□ -1.85
ATPAF1-212ENST00000542495 C3orf56Q8N813 242 aa3.48□□□□□ -1.85
ATPAF1-212ENST00000542495 TRBV10-3A0A0K0K1G6 114 aa3.47□□□□□ -1.85
ATPAF1-212ENST00000542495 hADV29S1A0JD25 119 aa3.47□□□□□ -1.85
ATPAF1-212ENST00000542495 H3BNG1 76 aa3.47□□□□□ -1.85
ATPAF1-212ENST00000542495 H3BQ85 93 aa3.47□□□□□ -1.85
ATPAF1-212ENST00000542495 KRTAP26-1Q6PEX3 210 aa3.47□□□□□ -1.85
ATPAF1-212ENST00000542495 Q6ZQT0 140 aa3.47□□□□□ -1.85
ATPAF1-212ENST00000542495 LINC00476Q8WZB0 136 aa3.47□□□□□ -1.85
ATPAF1-212ENST00000542495 C6orf48Q9UBA6 75 aa3.47□□□□□ -1.85
ATPAF1-212ENST00000542495 KLK12Q9UKR0 248 aa3.47□□□□□ -1.85
ATPAF1-212ENST00000542495 A0A087WVE0 104 aa3.46□□□□□ -1.86
ATPAF1-212ENST00000542495 HTN3P15516 51 aa3.46□□□□□ -1.86
ATPAF1-212ENST00000542495 SERP2Q8N6R1 65 aa3.46□□□□□ -1.86
ATPAF1-212ENST00000542495 UPK3BQ9BT76 320 aa3.46□□□□□ -1.86
ATPAF1-212ENST00000542495 TRBV7-6A0A0J9YX20 115 aa3.46□□□□□ -1.86
ATPAF1-212ENST00000542495 RBM3P98179 157 aaKnown RBP3.46□□□□□ -1.86
ATPAF1-212ENST00000542495 SMIM20Q8N5G0 67 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms