RNA–Protein interactions for RNA: ENST00000542452.1

C2CD3-217, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 956 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-217ENST00000542452 PMCHL2Q9BQD1 86 aa6.96□□□□□ -1.3
C2CD3-217ENST00000542452 SND1-IT1Q9HBX3 110 aa6.96□□□□□ -1.3
C2CD3-217ENST00000542452 RPL37AP8A6NKH3 93 aa6.95□□□□□ -1.3
C2CD3-217ENST00000542452 LBHQ53QV2 105 aaPredicted RBP6.95□□□□□ -1.3
C2CD3-217ENST00000542452 A0A0U1RRA0 63 aa6.94□□□□□ -1.3
C2CD3-217ENST00000542452 DIRC1Q969H9 104 aa6.94□□□□□ -1.3
C2CD3-217ENST00000542452 HSPB8Q9UJY1 196 aa6.94□□□□□ -1.3
C2CD3-217ENST00000542452 COX17Q14061 63 aa6.93□□□□□ -1.3
C2CD3-217ENST00000542452 NKAPP1Q8N9T2 125 aa6.93□□□□□ -1.3
C2CD3-217ENST00000542452 ZNF861PO60384 105 aa6.92□□□□□ -1.3
C2CD3-217ENST00000542452 SMIM13P0DJ93 91 aa6.92□□□□□ -1.3
C2CD3-217ENST00000542452 SFTA2Q6UW10 78 aa6.92□□□□□ -1.3
C2CD3-217ENST00000542452 PRR26Q8N8Z3 221 aa6.92□□□□□ -1.3
C2CD3-217ENST00000542452 LRP2P98164 4655 aa6.91□□□□□ -1.3
C2CD3-217ENST00000542452 IGKV2-28A0A075B6P5 120 aa6.91□□□□□ -1.3
C2CD3-217ENST00000542452 LEPROTO15243 131 aa6.91□□□□□ -1.3
C2CD3-217ENST00000542452 BCE1O60756 84 aa6.91□□□□□ -1.3
C2CD3-217ENST00000542452 DPM2O94777 84 aa6.91□□□□□ -1.3
C2CD3-217ENST00000542452 IGKV2D-28P01615 120 aa6.91□□□□□ -1.3
C2CD3-217ENST00000542452 LINC00158P58513 81 aa6.91□□□□□ -1.3
C2CD3-217ENST00000542452 KRTAP13-1Q8IUC0 172 aa6.91□□□□□ -1.3
C2CD3-217ENST00000542452 NDUFA12Q9UI09 145 aa6.91□□□□□ -1.3
C2CD3-217ENST00000542452 IGKCP01834 107 aa6.9□□□□□ -1.3
C2CD3-217ENST00000542452 PLNP26678 52 aa6.9□□□□□ -1.3
C2CD3-217ENST00000542452 IGLV1-50A0A075B6I6 118 aa6.89□□□□□ -1.31
C2CD3-217ENST00000542452 TMEM238C9JI98 176 aa6.89□□□□□ -1.31
C2CD3-217ENST00000542452 MEIG1Q5JSS6 88 aa6.89□□□□□ -1.31
C2CD3-217ENST00000542452 MIR7-3HGQ8N6C7 128 aa6.89□□□□□ -1.31
C2CD3-217ENST00000542452 MAP1LC3CQ9BXW4 147 aa6.89□□□□□ -1.31
C2CD3-217ENST00000542452 SYS1-DBNDD2H3BUS1 97 aa6.88□□□□□ -1.31
C2CD3-217ENST00000542452 J3QQQ9 107 aa6.88□□□□□ -1.31
C2CD3-217ENST00000542452 HERV-K104P63124 156 aa6.88□□□□□ -1.31
C2CD3-217ENST00000542452 PLEKHB2Q96CS7 222 aa6.88□□□□□ -1.31
C2CD3-217ENST00000542452 MYMXA0A1B0GTQ4 84 aa6.87□□□□□ -1.31
C2CD3-217ENST00000542452 M0R378 163 aa6.87□□□□□ -1.31
C2CD3-217ENST00000542452 RPL24P83731 157 aaKnown RBP6.87□□□□□ -1.31
C2CD3-217ENST00000542452 COA6Q5JTJ3 125 aaKnown RBP6.87□□□□□ -1.31
C2CD3-217ENST00000542452 DAND5Q8N907 189 aa6.87□□□□□ -1.31
C2CD3-217ENST00000542452 RPL28P46779 137 aaKnown RBP6.86□□□□□ -1.31
C2CD3-217ENST00000542452 HERVK_113P61574 105 aa6.86□□□□□ -1.31
C2CD3-217ENST00000542452 PRLHP81277 87 aa6.86□□□□□ -1.31
C2CD3-217ENST00000542452 LINC01545Q5VT33 79 aa6.86□□□□□ -1.31
C2CD3-217ENST00000542452 TMEM126AQ9H061 195 aa6.86□□□□□ -1.31
C2CD3-217ENST00000542452 NCR3O14931 201 aa6.85□□□□□ -1.31
C2CD3-217ENST00000542452 C3orf79P0CE67 100 aa6.85□□□□□ -1.31
C2CD3-217ENST00000542452 BOD1L2Q8IYS8 172 aa6.85□□□□□ -1.31
C2CD3-217ENST00000542452 LPAP08519 4548 aa6.84□□□□□ -1.31
C2CD3-217ENST00000542452 A0A087X002 238 aa6.84□□□□□ -1.31
C2CD3-217ENST00000542452 E9PLD3 99 aa6.84□□□□□ -1.31
C2CD3-217ENST00000542452 LGALS3P17931 250 aaKnown RBP6.84□□□□□ -1.31
C2CD3-217ENST00000542452 NMUP48645 174 aa6.84□□□□□ -1.31
C2CD3-217ENST00000542452 UBE2AP49459 152 aa6.84□□□□□ -1.31
C2CD3-217ENST00000542452 ATP6V1G1O75348 118 aa6.83□□□□□ -1.32
C2CD3-217ENST00000542452 C4orf48Q5BLP8 95 aa6.83□□□□□ -1.32
C2CD3-217ENST00000542452 PET117Q6UWS5 81 aa6.83□□□□□ -1.32
C2CD3-217ENST00000542452 FAM19A1Q7Z5A9 133 aa6.83□□□□□ -1.32
C2CD3-217ENST00000542452 ANAPC11Q9NYG5 84 aa6.83□□□□□ -1.32
C2CD3-217ENST00000542452 IGKV2D-26A0A0A0MRZ7 120 aa6.82□□□□□ -1.32
C2CD3-217ENST00000542452 LOC107984156A0A0G2JMH3 177 aa6.82□□□□□ -1.32
C2CD3-217ENST00000542452 A0A0J9YXY3 114 aa6.82□□□□□ -1.32
C2CD3-217ENST00000542452 EIF4EBP3O60516 100 aaPredicted RBP6.82□□□□□ -1.32
C2CD3-217ENST00000542452 SOSTDC1Q6X4U4 206 aa6.82□□□□□ -1.32
C2CD3-217ENST00000542452 ARL17AQ8IVW1 177 aa6.82□□□□□ -1.32
C2CD3-217ENST00000542452 LINC00587B1AMM8 73 aa6.81□□□□□ -1.32
C2CD3-217ENST00000542452 KRTAP13-2Q52LG2 175 aa6.81□□□□□ -1.32
C2CD3-217ENST00000542452 ADAMTSL4-AS1Q5T5F5 129 aa6.81□□□□□ -1.32
C2CD3-217ENST00000542452 LITAFQ99732 161 aa6.81□□□□□ -1.32
C2CD3-217ENST00000542452 TTTY13Q9BZ97 58 aa6.81□□□□□ -1.32
C2CD3-217ENST00000542452 TRBV10-3A0A0K0K1G6 114 aa6.8□□□□□ -1.32
C2CD3-217ENST00000542452 PRYO14603 147 aa6.8□□□□□ -1.32
C2CD3-217ENST00000542452 SPRR1AP35321 89 aa6.8□□□□□ -1.32
C2CD3-217ENST00000542452 KRTDAPP60985 99 aa6.8□□□□□ -1.32
C2CD3-217ENST00000542452 RNF213Q63HN8 5207 aa6.79□□□□□ -1.32
C2CD3-217ENST00000542452 KRTAP4-16G5E9R7 235 aaPredicted RBP6.79□□□□□ -1.32
C2CD3-217ENST00000542452 RPL13AP40429 203 aaKnown RBP6.79□□□□□ -1.32
C2CD3-217ENST00000542452 NPC2P61916 151 aa6.79□□□□□ -1.32
C2CD3-217ENST00000542452 LCE2BO14633 110 aa6.78□□□□□ -1.32
C2CD3-217ENST00000542452 S100A1P23297 94 aa6.78□□□□□ -1.32
C2CD3-217ENST00000542452 KCNQ1DNQ9H478 68 aa6.78□□□□□ -1.32
C2CD3-217ENST00000542452 ANKRD39Q53RE8 183 aa6.77□□□□□ -1.33
C2CD3-217ENST00000542452 HIGD2AQ9BW72 106 aa6.77□□□□□ -1.33
C2CD3-217ENST00000542452 CRYGAP11844 174 aa6.76□□□□□ -1.33
C2CD3-217ENST00000542452 ATOH7Q8N100 152 aa6.76□□□□□ -1.33
C2CD3-217ENST00000542452 HIST3H2BBQ8N257 126 aa6.76□□□□□ -1.33
C2CD3-217ENST00000542452 LINC00337Q8N6G1 96 aa6.76□□□□□ -1.33
C2CD3-217ENST00000542452 SPANXB1Q9NS25 103 aaPredicted RBP6.76□□□□□ -1.33
C2CD3-217ENST00000542452 TRBV10-2A0A0K0K1G8 114 aa6.75□□□□□ -1.33
C2CD3-217ENST00000542452 ZNF815PA8K554 130 aa6.75□□□□□ -1.33
C2CD3-217ENST00000542452 NDUFC2O95298 119 aa6.75□□□□□ -1.33
C2CD3-217ENST00000542452 DDTP30046 118 aa6.75□□□□□ -1.33
C2CD3-217ENST00000542452 SMCPP49901 116 aaPredicted RBP6.75□□□□□ -1.33
C2CD3-217ENST00000542452 FAM229BQ4G0N7 80 aa6.75□□□□□ -1.33
C2CD3-217ENST00000542452 SMCR5Q8TEV8 140 aa6.75□□□□□ -1.33
C2CD3-217ENST00000542452 IGLV6-57P01721 117 aa6.74□□□□□ -1.33
C2CD3-217ENST00000542452 LINC00308Q8TCZ7 52 aa6.74□□□□□ -1.33
C2CD3-217ENST00000542452 SPRR4Q96PI1 79 aa6.74□□□□□ -1.33
C2CD3-217ENST00000542452 HIST1H2BLQ99880 126 aa6.74□□□□□ -1.33
C2CD3-217ENST00000542452 MIEN1Q9BRT3 115 aa6.74□□□□□ -1.33
C2CD3-217ENST00000542452 B5MCH6 92 aa6.73□□□□□ -1.33
C2CD3-217ENST00000542452 TIMM17BO60830 172 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms