RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 HSBP1O75506 76 aa11.95□□□□□ -0.5
DDB1-220ENST00000542337 YPEL4Q96NS1 127 aa11.95□□□□□ -0.5
DDB1-220ENST00000542337 TMEM126AQ9H061 195 aa11.95□□□□□ -0.5
DDB1-220ENST00000542337 FAM229BQ4G0N7 80 aa11.94□□□□□ -0.5
DDB1-220ENST00000542337 ANAPC11Q9NYG5 84 aa11.93□□□□□ -0.5
DDB1-220ENST00000542337 A0A0U1RRA0 63 aa11.92□□□□□ -0.5
DDB1-220ENST00000542337 TMEM238C9JI98 176 aa11.92□□□□□ -0.5
DDB1-220ENST00000542337 PRLHP81277 87 aa11.92□□□□□ -0.5
DDB1-220ENST00000542337 LPAP08519 4548 aa11.92□□□□□ -0.5
DDB1-220ENST00000542337 IGKV2D-26A0A0A0MRZ7 120 aa11.91□□□□□ -0.5
DDB1-220ENST00000542337 LINC00587B1AMM8 73 aa11.91□□□□□ -0.5
DDB1-220ENST00000542337 M0R378 163 aa11.9□□□□□ -0.5
DDB1-220ENST00000542337 MEIG1Q5JSS6 88 aa11.9□□□□□ -0.5
DDB1-220ENST00000542337 HERV-K104P63124 156 aa11.89□□□□□ -0.51
DDB1-220ENST00000542337 CBLN2Q8IUK8 224 aa11.89□□□□□ -0.51
DDB1-220ENST00000542337 FAM19A2Q8N3H0 131 aa11.89□□□□□ -0.51
DDB1-220ENST00000542337 SMIM13P0DJ93 91 aa11.88□□□□□ -0.51
DDB1-220ENST00000542337 Q8NDZ9 215 aa11.88□□□□□ -0.51
DDB1-220ENST00000542337 H0Y8G0 127 aa11.87□□□□□ -0.51
DDB1-220ENST00000542337 TRGC2P03986 189 aa11.86□□□□□ -0.51
DDB1-220ENST00000542337 KRTAP13-2Q52LG2 175 aa11.86□□□□□ -0.51
DDB1-220ENST00000542337 BOD1L2Q8IYS8 172 aa11.86□□□□□ -0.51
DDB1-220ENST00000542337 MAP1LC3CQ9BXW4 147 aa11.86□□□□□ -0.51
DDB1-220ENST00000542337 MYMXA0A1B0GTQ4 84 aa11.85□□□□□ -0.51
DDB1-220ENST00000542337 LEPROTL1O95214 131 aa11.85□□□□□ -0.51
DDB1-220ENST00000542337 LINC00304Q8N9R0 145 aa11.85□□□□□ -0.51
DDB1-220ENST00000542337 HIGD2AQ9BW72 106 aa11.85□□□□□ -0.51
DDB1-220ENST00000542337 NDUFA12Q9UI09 145 aa11.85□□□□□ -0.51
DDB1-220ENST00000542337 MIR7-3HGQ8N6C7 128 aa11.84□□□□□ -0.51
DDB1-220ENST00000542337 PLEKHB2Q96CS7 222 aa11.84□□□□□ -0.51
DDB1-220ENST00000542337 S100A12P80511 92 aa11.82□□□□□ -0.52
DDB1-220ENST00000542337 HSPB8Q9UJY1 196 aa11.82□□□□□ -0.52
DDB1-220ENST00000542337 SERF1AO75920 110 aa11.81□□□□□ -0.52
DDB1-220ENST00000542337 PLNP26678 52 aa11.81□□□□□ -0.52
DDB1-220ENST00000542337 PRYO14603 147 aa11.8□□□□□ -0.52
DDB1-220ENST00000542337 ZNF706Q9Y5V0 76 aaPredicted RBP11.8□□□□□ -0.52
DDB1-220ENST00000542337 NCR3O14931 201 aa11.79□□□□□ -0.52
DDB1-220ENST00000542337 LEPROTO15243 131 aa11.79□□□□□ -0.52
DDB1-220ENST00000542337 HERVK_113P61574 105 aa11.79□□□□□ -0.52
DDB1-220ENST00000542337 CTAG1AP78358 180 aa11.79□□□□□ -0.52
DDB1-220ENST00000542337 LINC00337Q8N6G1 96 aa11.77□□□□□ -0.53
DDB1-220ENST00000542337 KCNQ1DNQ9H478 68 aa11.77□□□□□ -0.53
DDB1-220ENST00000542337 ETDCA0A1B0GVM5 59 aa11.76□□□□□ -0.53
DDB1-220ENST00000542337 DPM2O94777 84 aa11.76□□□□□ -0.53
DDB1-220ENST00000542337 FABP4P15090 132 aa11.76□□□□□ -0.53
DDB1-220ENST00000542337 SPRR4Q96PI1 79 aa11.75□□□□□ -0.53
DDB1-220ENST00000542337 J3QQQ9 107 aa11.74□□□□□ -0.53
DDB1-220ENST00000542337 LGALS3P17931 250 aaKnown RBP11.73□□□□□ -0.53
DDB1-220ENST00000542337 NMUP48645 174 aa11.73□□□□□ -0.53
DDB1-220ENST00000542337 LINC00310P59036 64 aa11.73□□□□□ -0.53
DDB1-220ENST00000542337 C4orf48Q5BLP8 95 aa11.73□□□□□ -0.53
DDB1-220ENST00000542337 SPAG11AQ6PDA7 123 aa11.73□□□□□ -0.53
DDB1-220ENST00000542337 C3orf22Q8N5N4 141 aa11.73□□□□□ -0.53
DDB1-220ENST00000542337 MIEN1Q9BRT3 115 aa11.73□□□□□ -0.53
DDB1-220ENST00000542337 TRBV10-3A0A0K0K1G6 114 aa11.72□□□□□ -0.53
DDB1-220ENST00000542337 IGKCP01834 107 aa11.72□□□□□ -0.53
DDB1-220ENST00000542337 SPRR1AP35321 89 aa11.72□□□□□ -0.53
DDB1-220ENST00000542337 TSPEAR-AS2P59090 65 aa11.72□□□□□ -0.53
DDB1-220ENST00000542337 SLC7A5P1Q8MH63 180 aa11.72□□□□□ -0.53
DDB1-220ENST00000542337 RETNLBQ9BQ08 111 aa11.72□□□□□ -0.53
DDB1-220ENST00000542337 SMCR5Q8TEV8 140 aa11.71□□□□□ -0.53
DDB1-220ENST00000542337 LOC107984156A0A0G2JMH3 177 aa11.7□□□□□ -0.54
DDB1-220ENST00000542337 COLCA2A8K830 154 aa11.7□□□□□ -0.54
DDB1-220ENST00000542337 ARL17AQ8IVW1 177 aa11.7□□□□□ -0.54
DDB1-220ENST00000542337 DAND5Q8N907 189 aa11.7□□□□□ -0.54
DDB1-220ENST00000542337 PMCHL2Q9BQD1 86 aa11.7□□□□□ -0.54
DDB1-220ENST00000542337 TRBV10-2A0A0K0K1G8 114 aa11.69□□□□□ -0.54
DDB1-220ENST00000542337 IGLV7-46A0A075B6I9 117 aa11.68□□□□□ -0.54
DDB1-220ENST00000542337 A0A0U1RQV1 116 aa11.68□□□□□ -0.54
DDB1-220ENST00000542337 DDTP30046 118 aa11.68□□□□□ -0.54
DDB1-220ENST00000542337 KRTAP4-16G5E9R7 235 aaPredicted RBP11.67□□□□□ -0.54
DDB1-220ENST00000542337 SPANXB1Q9NS25 103 aaPredicted RBP11.67□□□□□ -0.54
DDB1-220ENST00000542337 S100A7L2Q5SY68 101 aa11.66□□□□□ -0.54
DDB1-220ENST00000542337 CDIP1Q9H305 208 aa11.66□□□□□ -0.54
DDB1-220ENST00000542337 PPDPFQ9H3Y8 114 aa11.66□□□□□ -0.54
DDB1-220ENST00000542337 B5MCH6 92 aa11.64□□□□□ -0.55
DDB1-220ENST00000542337 NDUFC2O95298 119 aa11.64□□□□□ -0.55
DDB1-220ENST00000542337 TPRXLQ17RH7 258 aa11.63□□□□□ -0.55
DDB1-220ENST00000542337 GAGE2AQ6NT46 116 aa11.62□□□□□ -0.55
DDB1-220ENST00000542337 Q8NBF4 154 aa11.62□□□□□ -0.55
DDB1-220ENST00000542337 E9PLD3 99 aa11.61□□□□□ -0.55
DDB1-220ENST00000542337 JOSD1Q15040 202 aaPredicted RBP11.6□□□□□ -0.55
DDB1-220ENST00000542337 LINC00483Q53H64 154 aa11.6□□□□□ -0.55
DDB1-220ENST00000542337 CBY1Q9Y3M2 126 aa11.6□□□□□ -0.55
DDB1-220ENST00000542337 A0A0J9YXY3 114 aa11.59□□□□□ -0.55
DDB1-220ENST00000542337 IGLV6-57P01721 117 aa11.59□□□□□ -0.55
DDB1-220ENST00000542337 SYS1-DBNDD2H3BUS1 97 aa11.58□□□□□ -0.56
DDB1-220ENST00000542337 SPINK1P00995 79 aa11.58□□□□□ -0.56
DDB1-220ENST00000542337 NPC2P61916 151 aa11.58□□□□□ -0.56
DDB1-220ENST00000542337 Q6ZRX8 168 aa11.58□□□□□ -0.56
DDB1-220ENST00000542337 FP248Q71RG6 208 aaPredicted RBP11.58□□□□□ -0.56
DDB1-220ENST00000542337 TRAV23DV6A0A075B6W5 121 aa11.57□□□□□ -0.56
DDB1-220ENST00000542337 MUC2Q02817 5179 aa11.56□□□□□ -0.56
DDB1-220ENST00000542337 ERC2-IT1O76042 136 aa11.56□□□□□ -0.56
DDB1-220ENST00000542337 HINT1P49773 126 aaPredicted RBP11.56□□□□□ -0.56
DDB1-220ENST00000542337 ADAMTSL4-AS1Q5T5F5 129 aa11.56□□□□□ -0.56
DDB1-220ENST00000542337 IGLV9-49A0A0B4J1Y8 123 aa11.55□□□□□ -0.56
DDB1-220ENST00000542337 HIST1H2BKO60814 126 aa11.55□□□□□ -0.56
DDB1-220ENST00000542337 HIST1H2BJP06899 126 aa11.55□□□□□ -0.56
DDB1-220ENST00000542337 HIST1H2BOP23527 126 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms