RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 M0R378 163 aa9.15□□□□□ -0.94
VPS33A-206ENST00000542310 TSPAN13O95857 204 aa9.15□□□□□ -0.94
VPS33A-206ENST00000542310 CTAG1AP78358 180 aa9.15□□□□□ -0.94
VPS33A-206ENST00000542310 PRLHP81277 87 aa9.15□□□□□ -0.94
VPS33A-206ENST00000542310 YPEL4Q96NS1 127 aa9.15□□□□□ -0.94
VPS33A-206ENST00000542310 TMEM238C9JI98 176 aa9.14□□□□□ -0.95
VPS33A-206ENST00000542310 Q8NDZ9 215 aa9.14□□□□□ -0.95
VPS33A-206ENST00000542310 IFI27L1Q96BM0 104 aa9.14□□□□□ -0.95
VPS33A-206ENST00000542310 ANAPC11Q9NYG5 84 aa9.14□□□□□ -0.95
VPS33A-206ENST00000542310 LINC00304Q8N9R0 145 aa9.13□□□□□ -0.95
VPS33A-206ENST00000542310 LINC00158P58513 81 aa9.12□□□□□ -0.95
VPS33A-206ENST00000542310 IGKV2D-26A0A0A0MRZ7 120 aa9.11□□□□□ -0.95
VPS33A-206ENST00000542310 HERV-K104P63124 156 aa9.1□□□□□ -0.95
VPS33A-206ENST00000542310 CBLN2Q8IUK8 224 aa9.1□□□□□ -0.95
VPS33A-206ENST00000542310 PLEKHB2Q96CS7 222 aa9.09□□□□□ -0.95
VPS33A-206ENST00000542310 LINC00587B1AMM8 73 aa9.08□□□□□ -0.96
VPS33A-206ENST00000542310 PRYO14603 147 aa9.08□□□□□ -0.96
VPS33A-206ENST00000542310 HSBP1O75506 76 aa9.08□□□□□ -0.96
VPS33A-206ENST00000542310 MEIG1Q5JSS6 88 aa9.07□□□□□ -0.96
VPS33A-206ENST00000542310 ATP6V1G1O75348 118 aa9.06□□□□□ -0.96
VPS33A-206ENST00000542310 SMIM13P0DJ93 91 aa9.06□□□□□ -0.96
VPS33A-206ENST00000542310 HIGD2AQ9BW72 106 aa9.06□□□□□ -0.96
VPS33A-206ENST00000542310 ZNF706Q9Y5V0 76 aaPredicted RBP9.06□□□□□ -0.96
VPS33A-206ENST00000542310 MUC2Q02817 5179 aa9.05□□□□□ -0.96
VPS33A-206ENST00000542310 A0A0U1RQV1 116 aa9.05□□□□□ -0.96
VPS33A-206ENST00000542310 A0A0U1RRA0 63 aa9.05□□□□□ -0.96
VPS33A-206ENST00000542310 BOD1L2Q8IYS8 172 aa9.05□□□□□ -0.96
VPS33A-206ENST00000542310 MIR7-3HGQ8N6C7 128 aa9.05□□□□□ -0.96
VPS33A-206ENST00000542310 LINC00337Q8N6G1 96 aa9.05□□□□□ -0.96
VPS33A-206ENST00000542310 SPRR4Q96PI1 79 aa9.05□□□□□ -0.96
VPS33A-206ENST00000542310 NDUFA12Q9UI09 145 aa9.05□□□□□ -0.96
VPS33A-206ENST00000542310 MYMXA0A1B0GTQ4 84 aa9.04□□□□□ -0.96
VPS33A-206ENST00000542310 SPRR1AP35321 89 aa9.04□□□□□ -0.96
VPS33A-206ENST00000542310 TPRXLQ17RH7 258 aa9.04□□□□□ -0.96
VPS33A-206ENST00000542310 MAP1LC3CQ9BXW4 147 aa9.04□□□□□ -0.96
VPS33A-206ENST00000542310 KCNQ1DNQ9H478 68 aa9.04□□□□□ -0.96
VPS33A-206ENST00000542310 FAM19A2Q8N3H0 131 aa9.03□□□□□ -0.96
VPS33A-206ENST00000542310 NCR3O14931 201 aa9.02□□□□□ -0.97
VPS33A-206ENST00000542310 PLNP26678 52 aa9.02□□□□□ -0.97
VPS33A-206ENST00000542310 SPAG11AQ6PDA7 123 aa9.02□□□□□ -0.97
VPS33A-206ENST00000542310 C3orf22Q8N5N4 141 aa9.02□□□□□ -0.97
VPS33A-206ENST00000542310 RETNLBQ9BQ08 111 aa9.02□□□□□ -0.97
VPS33A-206ENST00000542310 LEPROTL1O95214 131 aa9.01□□□□□ -0.97
VPS33A-206ENST00000542310 LOC107984156A0A0G2JMH3 177 aa9□□□□□ -0.97
VPS33A-206ENST00000542310 KRTAP4-16G5E9R7 235 aaPredicted RBP9□□□□□ -0.97
VPS33A-206ENST00000542310 LEPROTO15243 131 aa9□□□□□ -0.97
VPS33A-206ENST00000542310 TRGC2P03986 189 aa9□□□□□ -0.97
VPS33A-206ENST00000542310 S100A12P80511 92 aa9□□□□□ -0.97
VPS33A-206ENST00000542310 ARL17AQ8IVW1 177 aa9□□□□□ -0.97
VPS33A-206ENST00000542310 ETDCA0A1B0GVM5 59 aa8.99□□□□□ -0.97
VPS33A-206ENST00000542310 H0Y8G0 127 aa8.99□□□□□ -0.97
VPS33A-206ENST00000542310 SERF1AO75920 110 aa8.99□□□□□ -0.97
VPS33A-206ENST00000542310 LINC00310P59036 64 aa8.99□□□□□ -0.97
VPS33A-206ENST00000542310 TSPEAR-AS2P59090 65 aa8.99□□□□□ -0.97
VPS33A-206ENST00000542310 HSPB8Q9UJY1 196 aa8.99□□□□□ -0.97
VPS33A-206ENST00000542310 IGLV7-46A0A075B6I9 117 aa8.98□□□□□ -0.97
VPS33A-206ENST00000542310 TRBV10-3A0A0K0K1G6 114 aa8.98□□□□□ -0.97
VPS33A-206ENST00000542310 TRBV10-2A0A0K0K1G8 114 aa8.98□□□□□ -0.97
VPS33A-206ENST00000542310 NMUP48645 174 aa8.98□□□□□ -0.97
VPS33A-206ENST00000542310 HERVK_113P61574 105 aa8.98□□□□□ -0.97
VPS33A-206ENST00000542310 J3QQQ9 107 aa8.96□□□□□ -0.98
VPS33A-206ENST00000542310 DPM2O94777 84 aa8.96□□□□□ -0.98
VPS33A-206ENST00000542310 LINC00483Q53H64 154 aa8.96□□□□□ -0.98
VPS33A-206ENST00000542310 FP248Q71RG6 208 aaPredicted RBP8.96□□□□□ -0.98
VPS33A-206ENST00000542310 CDIP1Q9H305 208 aa8.96□□□□□ -0.98
VPS33A-206ENST00000542310 SMCR5Q8TEV8 140 aa8.95□□□□□ -0.98
VPS33A-206ENST00000542310 SPANXB1Q9NS25 103 aaPredicted RBP8.95□□□□□ -0.98
VPS33A-206ENST00000542310 MUC17Q685J3 4493 aa8.95□□□□□ -0.98
VPS33A-206ENST00000542310 C4orf48Q5BLP8 95 aa8.94□□□□□ -0.98
VPS33A-206ENST00000542310 MIEN1Q9BRT3 115 aa8.94□□□□□ -0.98
VPS33A-206ENST00000542310 B5MCH6 92 aa8.93□□□□□ -0.98
VPS33A-206ENST00000542310 NDUFC2O95298 119 aa8.93□□□□□ -0.98
VPS33A-206ENST00000542310 IGKCP01834 107 aa8.93□□□□□ -0.98
VPS33A-206ENST00000542310 LGALS3P17931 250 aaKnown RBP8.93□□□□□ -0.98
VPS33A-206ENST00000542310 DDTP30046 118 aa8.93□□□□□ -0.98
VPS33A-206ENST00000542310 DAND5Q8N907 189 aa8.93□□□□□ -0.98
VPS33A-206ENST00000542310 Q8NBF4 154 aa8.93□□□□□ -0.98
VPS33A-206ENST00000542310 PPDPFQ9H3Y8 114 aa8.92□□□□□ -0.98
VPS33A-206ENST00000542310 SPINK1P00995 79 aa8.91□□□□□ -0.98
VPS33A-206ENST00000542310 Q6ZRX8 168 aa8.91□□□□□ -0.98
VPS33A-206ENST00000542310 FABP4P15090 132 aa8.9□□□□□ -0.98
VPS33A-206ENST00000542310 RPS29P62273 56 aaKnown RBP8.9□□□□□ -0.98
VPS33A-206ENST00000542310 IGLV6-57P01721 117 aa8.89□□□□□ -0.99
VPS33A-206ENST00000542310 PMCHL2Q9BQD1 86 aa8.89□□□□□ -0.99
VPS33A-206ENST00000542310 COLCA2A8K830 154 aa8.88□□□□□ -0.99
VPS33A-206ENST00000542310 Q9BRP9 147 aa8.88□□□□□ -0.99
VPS33A-206ENST00000542310 TRAV23DV6A0A075B6W5 121 aa8.87□□□□□ -0.99
VPS33A-206ENST00000542310 E9PLD3 99 aa8.87□□□□□ -0.99
VPS33A-206ENST00000542310 JOSD1Q15040 202 aaPredicted RBP8.87□□□□□ -0.99
VPS33A-206ENST00000542310 S100A7L2Q5SY68 101 aa8.87□□□□□ -0.99
VPS33A-206ENST00000542310 GAGE2AQ6NT46 116 aa8.87□□□□□ -0.99
VPS33A-206ENST00000542310 FAT4Q6V0I7 4981 aa8.86□□□□□ -0.99
VPS33A-206ENST00000542310 ERC2-IT1O76042 136 aa8.86□□□□□ -0.99
VPS33A-206ENST00000542310 SSBP3-AS1Q7Z2R9 100 aa8.86□□□□□ -0.99
VPS33A-206ENST00000542310 CBY1Q9Y3M2 126 aa8.86□□□□□ -0.99
VPS33A-206ENST00000542310 A0A0J9YXY3 114 aa8.85□□□□□ -0.99
VPS33A-206ENST00000542310 MOBPQ13875 183 aa8.85□□□□□ -0.99
VPS33A-206ENST00000542310 KRTAP13-3Q3SY46 172 aa8.84□□□□□ -0.99
VPS33A-206ENST00000542310 LCE2AQ5TA79 106 aaPredicted RBP8.84□□□□□ -0.99
VPS33A-206ENST00000542310 SOSTDC1Q6X4U4 206 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms