RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 KRTAP1-5Q9BYS1 174 aa11.4□□□□□ -0.58
TMEM50B-210ENST00000542230 NCR3O14931 201 aa11.39□□□□□ -0.59
TMEM50B-210ENST00000542230 FBN3Q75N90 2809 aa11.39□□□□□ -0.59
TMEM50B-210ENST00000542230 LECT2O14960 151 aa11.38□□□□□ -0.59
TMEM50B-210ENST00000542230 K7ERU9 68 aa11.38□□□□□ -0.59
TMEM50B-210ENST00000542230 RPL28P46779 137 aaKnown RBP11.38□□□□□ -0.59
TMEM50B-210ENST00000542230 APLNQ9ULZ1 77 aa11.38□□□□□ -0.59
TMEM50B-210ENST00000542230 GVQW2A0A096LPI5 108 aaPredicted RBP11.37□□□□□ -0.59
TMEM50B-210ENST00000542230 ANKRD29Q8N6D5 301 aa11.37□□□□□ -0.59
TMEM50B-210ENST00000542230 CARD19Q96LW7 228 aa11.37□□□□□ -0.59
TMEM50B-210ENST00000542230 UPK3BQ9BT76 320 aa11.36□□□□□ -0.59
TMEM50B-210ENST00000542230 SLPIP03973 132 aa11.35□□□□□ -0.59
TMEM50B-210ENST00000542230 TRBV10-2A0A0K0K1G8 114 aa11.34□□□□□ -0.59
TMEM50B-210ENST00000542230 A0A087WYN8 130 aa11.33□□□□□ -0.6
TMEM50B-210ENST00000542230 TEN1Q86WV5 123 aa11.33□□□□□ -0.6
TMEM50B-210ENST00000542230 GAGE2EQ4V326 116 aa11.33□□□□□ -0.6
TMEM50B-210ENST00000542230 GAGE2DQ9UEU5 116 aa11.33□□□□□ -0.6
TMEM50B-210ENST00000542230 USP17L23D6RBM5 183 aa11.32□□□□□ -0.6
TMEM50B-210ENST00000542230 NDUFC2O95298 119 aa11.32□□□□□ -0.6
TMEM50B-210ENST00000542230 RPL18AQ02543 176 aaKnown RBP11.31□□□□□ -0.6
TMEM50B-210ENST00000542230 Q6ZRP5 223 aa11.31□□□□□ -0.6
TMEM50B-210ENST00000542230 C2orf48Q96LS8 159 aa11.31□□□□□ -0.6
TMEM50B-210ENST00000542230 VPS25Q9BRG1 176 aa11.31□□□□□ -0.6
TMEM50B-210ENST00000542230 TEX49A0A1B0GTD5 131 aa11.3□□□□□ -0.6
TMEM50B-210ENST00000542230 KMT2AQ03164 3969 aa11.3□□□□□ -0.6
TMEM50B-210ENST00000542230 SYCNQ0VAF6 134 aa11.3□□□□□ -0.6
TMEM50B-210ENST00000542230 UBE2DNLQ8IWF7 75 aa11.3□□□□□ -0.6
TMEM50B-210ENST00000542230 VPS13DQ5THJ4 4388 aa11.29□□□□□ -0.6
TMEM50B-210ENST00000542230 NHLRC4P0CG21 123 aaPredicted RBP11.28□□□□□ -0.6
TMEM50B-210ENST00000542230 NDUFC2-KCTD14E9PQ53 114 aa11.27□□□□□ -0.6
TMEM50B-210ENST00000542230 TMEM126AQ9H061 195 aa11.27□□□□□ -0.61
TMEM50B-210ENST00000542230 S100A7L2Q5SY68 101 aa11.26□□□□□ -0.61
TMEM50B-210ENST00000542230 C22orf24Q9Y442 160 aa11.26□□□□□ -0.61
TMEM50B-210ENST00000542230 PPDPFLQ8WWR9 84 aa11.26□□□□□ -0.61
TMEM50B-210ENST00000542230 C9orf129Q5T035 196 aaKnown RBP11.25□□□□□ -0.61
TMEM50B-210ENST00000542230 M0QXV9 152 aa11.25□□□□□ -0.61
TMEM50B-210ENST00000542230 TRBV10-3A0A0K0K1G6 114 aa11.24□□□□□ -0.61
TMEM50B-210ENST00000542230 TRACP01848 142 aa11.24□□□□□ -0.61
TMEM50B-210ENST00000542230 C6orf99Q4VX62 202 aa11.24□□□□□ -0.61
TMEM50B-210ENST00000542230 VPREB1P12018 145 aa11.24□□□□□ -0.61
TMEM50B-210ENST00000542230 MUC7Q8TAX7 377 aa11.24□□□□□ -0.61
TMEM50B-210ENST00000542230 LINC01600Q96MT4 127 aa11.24□□□□□ -0.61
TMEM50B-210ENST00000542230 H3BT86 120 aa11.23□□□□□ -0.61
TMEM50B-210ENST00000542230 IGLV6-57P01721 117 aa11.23□□□□□ -0.61
TMEM50B-210ENST00000542230 BAALC-AS2P0C853 105 aa11.23□□□□□ -0.61
TMEM50B-210ENST00000542230 H0YGX0 51 aa11.21□□□□□ -0.61
TMEM50B-210ENST00000542230 RMI2Q96E14 147 aa11.21□□□□□ -0.61
TMEM50B-210ENST00000542230 NUPR2A6NF83 97 aa11.2□□□□□ -0.62
TMEM50B-210ENST00000542230 SERTAD4-AS1Q5TG53 156 aa11.2□□□□□ -0.62
TMEM50B-210ENST00000542230 FAM168BA1KXE4 195 aa11.19□□□□□ -0.62
TMEM50B-210ENST00000542230 DNAH2Q9P225 4427 aa11.19□□□□□ -0.62
TMEM50B-210ENST00000542230 J3QR89 54 aa11.19□□□□□ -0.62
TMEM50B-210ENST00000542230 PSCAO43653 123 aa11.16□□□□□ -0.62
TMEM50B-210ENST00000542230 DNAL4O96015 105 aa11.16□□□□□ -0.62
TMEM50B-210ENST00000542230 F8WDY8 70 aa11.16□□□□□ -0.62
TMEM50B-210ENST00000542230 M0R2N4 97 aa11.16□□□□□ -0.62
TMEM50B-210ENST00000542230 GAGE2BQ13066 116 aa11.16□□□□□ -0.62
TMEM50B-210ENST00000542230 CDIP1Q9H305 208 aa11.16□□□□□ -0.62
TMEM50B-210ENST00000542230 A0A1B0GV72 72 aa11.15□□□□□ -0.62
TMEM50B-210ENST00000542230 KRTAP7-1Q8IUC3 87 aa11.15□□□□□ -0.62
TMEM50B-210ENST00000542230 TRAV23DV6A0A075B6W5 121 aa11.14□□□□□ -0.63
TMEM50B-210ENST00000542230 Q8N814 137 aa11.14□□□□□ -0.63
TMEM50B-210ENST00000542230 NBDYA0A0U1RRE5 68 aa11.14□□□□□ -0.63
TMEM50B-210ENST00000542230 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.13□□□□□ -0.63
TMEM50B-210ENST00000542230 M0R378 163 aa11.12□□□□□ -0.63
TMEM50B-210ENST00000542230 TLX1NBP0CAT3 122 aa11.12□□□□□ -0.63
TMEM50B-210ENST00000542230 ZNF73O43830 326 aaPredicted RBP11.11□□□□□ -0.63
TMEM50B-210ENST00000542230 LINC00575Q6W349 94 aa11.11□□□□□ -0.63
TMEM50B-210ENST00000542230 C7orf33Q8WU49 177 aa11.1□□□□□ -0.63
TMEM50B-210ENST00000542230 CBY1Q9Y3M2 126 aa11.1□□□□□ -0.63
TMEM50B-210ENST00000542230 HECTD4Q9Y4D8 3996 aa11.09□□□□□ -0.63
TMEM50B-210ENST00000542230 RPL37AP8A6NKH3 93 aa11.09□□□□□ -0.63
TMEM50B-210ENST00000542230 C21orf62-AS1Q17RA5 79 aa11.09□□□□□ -0.63
TMEM50B-210ENST00000542230 LINC00167Q96N53 147 aa11.09□□□□□ -0.63
TMEM50B-210ENST00000542230 DIRC1Q969H9 104 aa11.08□□□□□ -0.64
TMEM50B-210ENST00000542230 Q6ZRN7 208 aaPredicted RBP11.08□□□□□ -0.64
TMEM50B-210ENST00000542230 FAM19A5Q7Z5A7 132 aaPredicted RBP11.08□□□□□ -0.64
TMEM50B-210ENST00000542230 NKAPP1Q8N9T2 125 aa11.08□□□□□ -0.64
TMEM50B-210ENST00000542230 ORMDL1Q9P0S3 153 aa11.07□□□□□ -0.64
TMEM50B-210ENST00000542230 LRCOL1A6NCL2 159 aa11.06□□□□□ -0.64
TMEM50B-210ENST00000542230 A0A096LNI7 61 aa11.06□□□□□ -0.64
TMEM50B-210ENST00000542230 IGKV2-24A0A0C4DH68 120 aa11.06□□□□□ -0.64
TMEM50B-210ENST00000542230 hADV29S1A0JD25 119 aa11.06□□□□□ -0.64
TMEM50B-210ENST00000542230 XGP55808 180 aa11.05□□□□□ -0.64
TMEM50B-210ENST00000542230 LOC107984640A0A0U1RRK4 108 aa11.05□□□□□ -0.64
TMEM50B-210ENST00000542230 FUSP35637 526 aaKnown RBP eCLIP11.05□□□□□ -0.64
TMEM50B-210ENST00000542230 C14orf132Q9NPU4 83 aa11.05□□□□□ -0.64
TMEM50B-210ENST00000542230 KRTAP21-3Q3LHN1 58 aa11.04□□□□□ -0.64
TMEM50B-210ENST00000542230 COX7BP24311 80 aa11.04□□□□□ -0.64
TMEM50B-210ENST00000542230 CNBPP62633 177 aaKnown RBP11.04□□□□□ -0.64
TMEM50B-210ENST00000542230 MT-ATP8P03928 68 aa11.03□□□□□ -0.64
TMEM50B-210ENST00000542230 ELOF1P60002 83 aaKnown RBP11.03□□□□□ -0.64
TMEM50B-210ENST00000542230 TTC32Q5I0X7 151 aa11.03□□□□□ -0.64
TMEM50B-210ENST00000542230 Q6ZQY7 126 aa11.03□□□□□ -0.64
TMEM50B-210ENST00000542230 A0A1B0GX51 115 aa11.03□□□□□ -0.64
TMEM50B-210ENST00000542230 CHTF8P0CG12 524 aa11.03□□□□□ -0.64
TMEM50B-210ENST00000542230 SIGMAR1Q99720 223 aa11.02□□□□□ -0.65
TMEM50B-210ENST00000542230 SRRM2Q9UQ35 2752 aaKnown RBP11.01□□□□□ -0.65
TMEM50B-210ENST00000542230 PLA2G2DQ9UNK4 145 aa11.01□□□□□ -0.65
TMEM50B-210ENST00000542230 A0A1W2PNN7 141 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms