RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 ABCA5Q8WWZ7 1642 aa1.32□□□□□ -2.2
LEMD3-204ENST00000542032 ANKRD50Q9ULJ7 1429 aa1.32□□□□□ -2.2
LEMD3-204ENST00000542032 BCORQ6W2J9 1755 aa1.31□□□□□ -2.2
LEMD3-204ENST00000542032 FANCD2Q9BXW9 1451 aa1.31□□□□□ -2.2
LEMD3-204ENST00000542032 TECTAO75443 2155 aa1.31□□□□□ -2.2
LEMD3-204ENST00000542032 LRRC7Q96NW7 1537 aa1.31□□□□□ -2.2
LEMD3-204ENST00000542032 UBE2DNLQ8IWF7 75 aa1.31□□□□□ -2.2
LEMD3-204ENST00000542032 CFAP43Q8NDM7 1665 aa1.31□□□□□ -2.2
LEMD3-204ENST00000542032 COL14A1Q05707 1796 aaKnown RBP1.31□□□□□ -2.2
LEMD3-204ENST00000542032 ERCC6L2Q5T890 1561 aa1.3□□□□□ -2.2
LEMD3-204ENST00000542032 USP32Q8NFA0 1604 aa1.3□□□□□ -2.2
LEMD3-204ENST00000542032 LINC01549A6NIU2 74 aa1.3□□□□□ -2.2
LEMD3-204ENST00000542032 FBN3Q75N90 2809 aa1.3□□□□□ -2.2
LEMD3-204ENST00000542032 RALGAPBQ86X10 1494 aa1.3□□□□□ -2.2
LEMD3-204ENST00000542032 NHSQ6T4R5 1651 aa1.29□□□□□ -2.2
LEMD3-204ENST00000542032 PARP4Q9UKK3 1724 aaKnown RBP1.29□□□□□ -2.2
LEMD3-204ENST00000542032 TSC2P49815 1807 aa1.29□□□□□ -2.2
LEMD3-204ENST00000542032 LYNX1P0DP58 116 aa1.29□□□□□ -2.2
LEMD3-204ENST00000542032 COX7BP24311 80 aa1.29□□□□□ -2.2
LEMD3-204ENST00000542032 FXYD6P3P58550 94 aa1.29□□□□□ -2.2
LEMD3-204ENST00000542032 FLG2Q5D862 2391 aaPredicted RBP1.29□□□□□ -2.2
LEMD3-204ENST00000542032 KMT2BQ9UMN6 2715 aaPredicted RBP1.29□□□□□ -2.2
LEMD3-204ENST00000542032 POLR1AO95602 1720 aaPredicted RBP1.29□□□□□ -2.2
LEMD3-204ENST00000542032 FMN2Q9NZ56 1722 aa1.29□□□□□ -2.2
LEMD3-204ENST00000542032 LCE6AA0A183 80 aa1.28□□□□□ -2.2
LEMD3-204ENST00000542032 K7EIL1 84 aa1.28□□□□□ -2.2
LEMD3-204ENST00000542032 ENHOQ6UWT2 76 aa1.28□□□□□ -2.2
LEMD3-204ENST00000542032 KIAA0586Q9BVV6 1533 aa1.28□□□□□ -2.2
LEMD3-204ENST00000542032 ABCA6Q8N139 1617 aa1.28□□□□□ -2.2
LEMD3-204ENST00000542032 CICQ96RK0 1608 aaPredicted RBP1.28□□□□□ -2.2
LEMD3-204ENST00000542032 GCC2Q8IWJ2 1684 aa1.28□□□□□ -2.2
LEMD3-204ENST00000542032 A0A0G2JMZ2 1700 aa1.28□□□□□ -2.2
LEMD3-204ENST00000542032 ADCY10Q96PN6 1610 aa1.27□□□□□ -2.21
LEMD3-204ENST00000542032 IQGAP2Q13576 1575 aa1.27□□□□□ -2.21
LEMD3-204ENST00000542032 ASXL3Q9C0F0 2248 aa1.27□□□□□ -2.21
LEMD3-204ENST00000542032 CDC42BPAQ5VT25 1732 aa1.26□□□□□ -2.21
LEMD3-204ENST00000542032 RICTORQ6R327 1708 aa1.26□□□□□ -2.21
LEMD3-204ENST00000542032 KIF1AQ12756 1690 aa1.26□□□□□ -2.21
LEMD3-204ENST00000542032 ALS2Q96Q42 1657 aa1.26□□□□□ -2.21
LEMD3-204ENST00000542032 SLIT1O75093 1534 aa1.26□□□□□ -2.21
LEMD3-204ENST00000542032 ZDBF2Q9HCK1 2354 aa1.26□□□□□ -2.21
LEMD3-204ENST00000542032 J3QKU1 62 aa1.26□□□□□ -2.21
LEMD3-204ENST00000542032 MUC6Q6W4X9 2439 aa1.26□□□□□ -2.21
LEMD3-204ENST00000542032 DOT1LQ8TEK3 1739 aa1.26□□□□□ -2.21
LEMD3-204ENST00000542032 CROCC2H7BZ55 1655 aa1.26□□□□□ -2.21
LEMD3-204ENST00000542032 A0A0D9SFI3 127 aa1.25□□□□□ -2.21
LEMD3-204ENST00000542032 NDUFA4O00483 81 aa1.25□□□□□ -2.21
LEMD3-204ENST00000542032 KNTC1P50748 2209 aa1.25□□□□□ -2.21
LEMD3-204ENST00000542032 GLI2P10070 1586 aa1.25□□□□□ -2.21
LEMD3-204ENST00000542032 SPTY2D1-AS1A0A0U1RR47 76 aa1.24□□□□□ -2.21
LEMD3-204ENST00000542032 FCER1GP30273 86 aa1.24□□□□□ -2.21
LEMD3-204ENST00000542032 RPL38P63173 70 aaKnown RBP1.24□□□□□ -2.21
LEMD3-204ENST00000542032 UBL5Q9BZL1 73 aa1.24□□□□□ -2.21
LEMD3-204ENST00000542032 FXYD6Q9H0Q3 95 aa1.24□□□□□ -2.21
LEMD3-204ENST00000542032 RNF17Q9BXT8 1623 aaKnown RBP1.24□□□□□ -2.21
LEMD3-204ENST00000542032 EIF2AK4Q9P2K8 1649 aaKnown RBP1.24□□□□□ -2.21
LEMD3-204ENST00000542032 MAST1Q9Y2H9 1570 aa1.24□□□□□ -2.21
LEMD3-204ENST00000542032 LRRC37AA6NMS7 1700 aa1.23□□□□□ -2.21
LEMD3-204ENST00000542032 NRAPQ86VF7 1730 aa1.23□□□□□ -2.21
LEMD3-204ENST00000542032 ITSN2Q9NZM3 1697 aa1.23□□□□□ -2.21
LEMD3-204ENST00000542032 LAMC1P11047 1609 aa1.23□□□□□ -2.21
LEMD3-204ENST00000542032 SAMD9LQ8IVG5 1584 aa1.23□□□□□ -2.21
LEMD3-204ENST00000542032 CPSF4LA6NMK7 179 aaKnown RBP1.23□□□□□ -2.21
LEMD3-204ENST00000542032 QSER1Q2KHR3 1735 aa1.23□□□□□ -2.21
LEMD3-204ENST00000542032 DEPDC5O75140 1603 aa1.22□□□□□ -2.21
LEMD3-204ENST00000542032 CNTRLQ7Z7A1 2325 aa1.22□□□□□ -2.21
LEMD3-204ENST00000542032 CPS1P31327 1500 aa1.22□□□□□ -2.21
LEMD3-204ENST00000542032 TULP4Q9NRJ4 1543 aa1.22□□□□□ -2.21
LEMD3-204ENST00000542032 SNRPGP15A8MWD9 76 aa1.22□□□□□ -2.21
LEMD3-204ENST00000542032 SPINK9Q5DT21 86 aa1.22□□□□□ -2.21
LEMD3-204ENST00000542032 Q6ZSA8 131 aa1.22□□□□□ -2.21
LEMD3-204ENST00000542032 TP53AIP1Q9HCN2 124 aa1.22□□□□□ -2.21
LEMD3-204ENST00000542032 CRIPTQ9P021 101 aa1.22□□□□□ -2.21
LEMD3-204ENST00000542032 IQGAP1P46940 1657 aa1.22□□□□□ -2.21
LEMD3-204ENST00000542032 SORL1Q92673 2214 aa1.21□□□□□ -2.21
LEMD3-204ENST00000542032 CLASP1Q7Z460 1538 aa1.21□□□□□ -2.22
LEMD3-204ENST00000542032 URB1O60287 2271 aaKnown RBP1.21□□□□□ -2.22
LEMD3-204ENST00000542032 AHCTF1Q8WYP5 2266 aa1.21□□□□□ -2.22
LEMD3-204ENST00000542032 ANGP03950 147 aaKnown RBP1.21□□□□□ -2.22
LEMD3-204ENST00000542032 MROH2AA6NES4 1674 aa1.2□□□□□ -2.22
LEMD3-204ENST00000542032 CLTCL1P53675 1640 aa1.2□□□□□ -2.22
LEMD3-204ENST00000542032 I3L2K1 104 aa1.2□□□□□ -2.22
LEMD3-204ENST00000542032 ARL14EPLP0DKL9 152 aa1.2□□□□□ -2.22
LEMD3-204ENST00000542032 PIGYQ3MUY2 71 aa1.2□□□□□ -2.22
LEMD3-204ENST00000542032 TRPM2O94759 1503 aa1.2□□□□□ -2.22
LEMD3-204ENST00000542032 ABCC6O95255 1503 aa1.2□□□□□ -2.22
LEMD3-204ENST00000542032 SYCP2Q9BX26 1530 aa1.2□□□□□ -2.22
LEMD3-204ENST00000542032 GOLGA4Q13439 2230 aaKnown RBP1.19□□□□□ -2.22
LEMD3-204ENST00000542032 RP1L1Q8IWN7 2480 aaPredicted RBP1.19□□□□□ -2.22
LEMD3-204ENST00000542032 USMG5Q96IX5 58 aa1.19□□□□□ -2.22
LEMD3-204ENST00000542032 ANKRD17O75179 2603 aaKnown RBP1.18□□□□□ -2.22
LEMD3-204ENST00000542032 I3L3M4 83 aa1.18□□□□□ -2.22
LEMD3-204ENST00000542032 ATP7AQ04656 1500 aa1.18□□□□□ -2.22
LEMD3-204ENST00000542032 A0A1B0GUL6 1792 aa1.18□□□□□ -2.22
LEMD3-204ENST00000542032 NAV3Q8IVL0 2385 aa1.18□□□□□ -2.22
LEMD3-204ENST00000542032 TNCP24821 2201 aa1.17□□□□□ -2.22
LEMD3-204ENST00000542032 NWD1Q149M9 1564 aa1.17□□□□□ -2.22
LEMD3-204ENST00000542032 UGGT1Q9NYU2 1555 aa1.17□□□□□ -2.22
LEMD3-204ENST00000542032 EFCAB6Q5THR3 1501 aa1.17□□□□□ -2.22
LEMD3-204ENST00000542032 K7EMI3 77 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms