RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 LUZP6Q538Z0 58 aa10.68□□□□□ -0.7
HMGA2-210ENST00000541363 COA5Q86WW8 74 aa10.68□□□□□ -0.7
HMGA2-210ENST00000541363 FHL3Q13643 280 aa10.68□□□□□ -0.7
HMGA2-210ENST00000541363 Q6ZRP5 223 aa10.68□□□□□ -0.7
HMGA2-210ENST00000541363 LINC01554Q52M75 96 aa10.67□□□□□ -0.7
HMGA2-210ENST00000541363 DOPEY1Q5JWR5 2465 aa10.67□□□□□ -0.7
HMGA2-210ENST00000541363 RPL37AP61513 92 aaKnown RBP10.67□□□□□ -0.7
HMGA2-210ENST00000541363 CHTF8P0CG12 524 aa10.67□□□□□ -0.7
HMGA2-210ENST00000541363 TM2D3Q9BRN9 247 aa10.67□□□□□ -0.7
HMGA2-210ENST00000541363 HIVEP3Q5T1R4 2406 aa10.66□□□□□ -0.7
HMGA2-210ENST00000541363 COX8CQ7Z4L0 72 aa10.66□□□□□ -0.7
HMGA2-210ENST00000541363 PHF5AQ7RTV0 110 aaKnown RBP10.65□□□□□ -0.71
HMGA2-210ENST00000541363 Q6ZRX8 168 aa10.64□□□□□ -0.71
HMGA2-210ENST00000541363 FAM19A4Q96LR4 140 aa10.63□□□□□ -0.71
HMGA2-210ENST00000541363 IGLV5-39A0A0G2JS06 123 aa10.63□□□□□ -0.71
HMGA2-210ENST00000541363 C9orf129Q5T035 196 aaKnown RBP10.63□□□□□ -0.71
HMGA2-210ENST00000541363 A8MWP4 228 aa10.62□□□□□ -0.71
HMGA2-210ENST00000541363 COL27A1Q8IZC6 1860 aaPredicted RBP10.62□□□□□ -0.71
HMGA2-210ENST00000541363 AVPP01185 164 aa10.62□□□□□ -0.71
HMGA2-210ENST00000541363 J3QL48 77 aa10.61□□□□□ -0.71
HMGA2-210ENST00000541363 RTL8CO15255 209 aa10.61□□□□□ -0.71
HMGA2-210ENST00000541363 C2CD3Q4AC94 2353 aa10.61□□□□□ -0.71
HMGA2-210ENST00000541363 MRPL34Q9BQ48 92 aaKnown RBP10.6□□□□□ -0.71
HMGA2-210ENST00000541363 A0A096LNJ9 63 aa10.59□□□□□ -0.71
HMGA2-210ENST00000541363 C16orf90A8MZG2 172 aa10.59□□□□□ -0.71
HMGA2-210ENST00000541363 A8MUN3 132 aa10.59□□□□□ -0.71
HMGA2-210ENST00000541363 CD164Q04900 197 aa10.59□□□□□ -0.71
HMGA2-210ENST00000541363 CCDC168Q8NDH2 2452 aa10.58□□□□□ -0.72
HMGA2-210ENST00000541363 ERC2-IT1O76042 136 aa10.58□□□□□ -0.72
HMGA2-210ENST00000541363 TRBV7-4A0A0J9YYF1 115 aa10.57□□□□□ -0.72
HMGA2-210ENST00000541363 CDC42SE1Q9NRR8 79 aa10.57□□□□□ -0.72
HMGA2-210ENST00000541363 ST20-AS1Q8NBB2 130 aa10.56□□□□□ -0.72
HMGA2-210ENST00000541363 IGHV3OR16-9A0A0B4J2B5 98 aa10.56□□□□□ -0.72
HMGA2-210ENST00000541363 LINC01546A6NGU7 62 aa10.56□□□□□ -0.72
HMGA2-210ENST00000541363 FAM218AQ96MZ4 157 aa10.56□□□□□ -0.72
HMGA2-210ENST00000541363 KTN1-AS1Q86SY8 53 aa10.54□□□□□ -0.72
HMGA2-210ENST00000541363 LCA10Q71F78 164 aa10.53□□□□□ -0.72
HMGA2-210ENST00000541363 IGLV6-57P01721 117 aa10.52□□□□□ -0.73
HMGA2-210ENST00000541363 ZFHX2Q9C0A1 2572 aaPredicted RBP10.52□□□□□ -0.73
HMGA2-210ENST00000541363 H3BNG1 76 aa10.51□□□□□ -0.73
HMGA2-210ENST00000541363 ACACBO00763 2458 aa10.5□□□□□ -0.73
HMGA2-210ENST00000541363 K7EQZ3 153 aa10.5□□□□□ -0.73
HMGA2-210ENST00000541363 PRO3102Q9H379 93 aa10.49□□□□□ -0.73
HMGA2-210ENST00000541363 LINC00315P59091 139 aa10.49□□□□□ -0.73
HMGA2-210ENST00000541363 SMCPP49901 116 aaPredicted RBP10.49□□□□□ -0.73
HMGA2-210ENST00000541363 MYO18BQ8IUG5 2567 aa10.48□□□□□ -0.73
HMGA2-210ENST00000541363 RBM12B-AS1Q9P1G2 102 aa10.47□□□□□ -0.73
HMGA2-210ENST00000541363 PCSK5Q92824 1860 aa10.47□□□□□ -0.73
HMGA2-210ENST00000541363 IGLV5-45A0A087WSX0 123 aa10.46□□□□□ -0.73
HMGA2-210ENST00000541363 MYO9AB2RTY4 2548 aa10.46□□□□□ -0.74
HMGA2-210ENST00000541363 NBDYA0A0U1RRE5 68 aa10.44□□□□□ -0.74
HMGA2-210ENST00000541363 DSCR10P59022 87 aa10.44□□□□□ -0.74
HMGA2-210ENST00000541363 LINC00483Q53H64 154 aa10.44□□□□□ -0.74
HMGA2-210ENST00000541363 LRRK2Q5S007 2527 aa10.43□□□□□ -0.74
HMGA2-210ENST00000541363 CDSNQ15517 529 aa10.43□□□□□ -0.74
HMGA2-210ENST00000541363 KRTAP10-9P60411 292 aa10.43□□□□□ -0.74
HMGA2-210ENST00000541363 A0A0D9SG42 100 aa10.43□□□□□ -0.74
HMGA2-210ENST00000541363 IGLV5-37A0A075B6J1 123 aa10.43□□□□□ -0.74
HMGA2-210ENST00000541363 GVQW2A0A096LPI5 108 aaPredicted RBP10.42□□□□□ -0.74
HMGA2-210ENST00000541363 CSNK1G2-AS1Q8NCQ2 148 aa10.42□□□□□ -0.74
HMGA2-210ENST00000541363 CACNA1AO00555 2505 aa10.41□□□□□ -0.74
HMGA2-210ENST00000541363 OBSCN-AS1Q96MR7 158 aa10.41□□□□□ -0.74
HMGA2-210ENST00000541363 PRO0461Q9UI25 63 aa10.4□□□□□ -0.74
HMGA2-210ENST00000541363 C9orf92A6NGG3 77 aa10.4□□□□□ -0.74
HMGA2-210ENST00000541363 LINC00304Q8N9R0 145 aa10.4□□□□□ -0.74
HMGA2-210ENST00000541363 C8orf17Q9NRJ1 99 aa10.39□□□□□ -0.75
HMGA2-210ENST00000541363 F8P00451 2351 aa10.38□□□□□ -0.75
HMGA2-210ENST00000541363 A0A1B0GVX0 72 aa10.37□□□□□ -0.75
HMGA2-210ENST00000541363 PRR15Q8IV56 129 aa10.36□□□□□ -0.75
HMGA2-210ENST00000541363 MUC22E2RYF6 1773 aaPredicted RBP10.35□□□□□ -0.75
HMGA2-210ENST00000541363 NOTCH2Q04721 2471 aa10.35□□□□□ -0.75
HMGA2-210ENST00000541363 FAM168BA1KXE4 195 aa10.35□□□□□ -0.75
HMGA2-210ENST00000541363 LINC00588Q9Y4M8 146 aa10.33□□□□□ -0.76
HMGA2-210ENST00000541363 TTC28Q96AY4 2481 aa10.32□□□□□ -0.76
HMGA2-210ENST00000541363 FAM104AQ969W3 186 aa10.31□□□□□ -0.76
HMGA2-210ENST00000541363 IGFL1Q6UW32 110 aa10.3□□□□□ -0.76
HMGA2-210ENST00000541363 IGLV5-48A0A075B6I7 105 aa10.29□□□□□ -0.76
HMGA2-210ENST00000541363 KLKP1Q107X0 134 aa10.29□□□□□ -0.76
HMGA2-210ENST00000541363 ZNF575Q86XF7 245 aa10.28□□□□□ -0.76
HMGA2-210ENST00000541363 DNAH10OSP0CZ25 163 aa10.28□□□□□ -0.76
HMGA2-210ENST00000541363 Q1T7F1 81 aa10.28□□□□□ -0.76
HMGA2-210ENST00000541363 IGLV1-50A0A075B6I6 118 aa10.27□□□□□ -0.76
HMGA2-210ENST00000541363 LINC00336Q6ZUF6 198 aa10.27□□□□□ -0.76
HMGA2-210ENST00000541363 BDP1A6H8Y1 2624 aa10.27□□□□□ -0.77
HMGA2-210ENST00000541363 KCNQ1DNQ9H478 68 aa10.25□□□□□ -0.77
HMGA2-210ENST00000541363 ZNF861PO60384 105 aa10.23□□□□□ -0.77
HMGA2-210ENST00000541363 WWC2-AS2Q96NR7 200 aa10.23□□□□□ -0.77
HMGA2-210ENST00000541363 SPANXA2-OT1Q8N9U9 137 aa10.23□□□□□ -0.77
HMGA2-210ENST00000541363 A0A0A0MQY5 61 aa10.22□□□□□ -0.77
HMGA2-210ENST00000541363 CAMK2N1Q7Z7J9 78 aa10.21□□□□□ -0.77
HMGA2-210ENST00000541363 Q8NAQ8 132 aa10.21□□□□□ -0.78
HMGA2-210ENST00000541363 WIPF1O43516 503 aa10.19□□□□□ -0.78
HMGA2-210ENST00000541363 Q8N1X5 172 aa10.18□□□□□ -0.78
HMGA2-210ENST00000541363 ACANP16112 2415 aa10.17□□□□□ -0.78
HMGA2-210ENST00000541363 H7BZZ5 65 aa10.17□□□□□ -0.78
HMGA2-210ENST00000541363 LINC00528Q8N1L1 170 aa10.17□□□□□ -0.78
HMGA2-210ENST00000541363 NAV2Q8IVL1 2488 aa10.16□□□□□ -0.78
HMGA2-210ENST00000541363 FN1P02751 2386 aaKnown RBP10.16□□□□□ -0.78
HMGA2-210ENST00000541363 FLG2Q5D862 2391 aaPredicted RBP10.15□□□□□ -0.78
HMGA2-210ENST00000541363 A0A1W2PPR1 153 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms