RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 IGKV3D-7A0A0C4DH55 119 aa11.65□□□□□ -0.54
SPIDR-227ENST00000541342 KIAA0087Q14695 138 aa11.65□□□□□ -0.54
SPIDR-227ENST00000541342 LINC00167Q96N53 147 aa11.65□□□□□ -0.54
SPIDR-227ENST00000541342 Q8NDZ9 215 aa11.64□□□□□ -0.55
SPIDR-227ENST00000541342 ORMDL1Q9P0S3 153 aa11.64□□□□□ -0.55
SPIDR-227ENST00000541342 Q6JHZ5 121 aa11.63□□□□□ -0.55
SPIDR-227ENST00000541342 Q6ZTC4 211 aa11.63□□□□□ -0.55
SPIDR-227ENST00000541342 LINC01561Q8N1V8 128 aa11.63□□□□□ -0.55
SPIDR-227ENST00000541342 A0A0J9YWU9 116 aa11.63□□□□□ -0.55
SPIDR-227ENST00000541342 COX7CP15954 63 aa11.63□□□□□ -0.55
SPIDR-227ENST00000541342 A0A087WVE0 104 aa11.62□□□□□ -0.55
SPIDR-227ENST00000541342 C9orf116Q5BN46 136 aaPredicted RBP11.62□□□□□ -0.55
SPIDR-227ENST00000541342 LINC00269Q8N2A0 174 aa11.62□□□□□ -0.55
SPIDR-227ENST00000541342 MDFIQ99750 246 aa11.61□□□□□ -0.55
SPIDR-227ENST00000541342 Q8N814 137 aa11.61□□□□□ -0.55
SPIDR-227ENST00000541342 CYSTM1Q9H1C7 97 aa11.61□□□□□ -0.55
SPIDR-227ENST00000541342 K7EIL1 84 aa11.6□□□□□ -0.55
SPIDR-227ENST00000541342 ATOX1O00244 68 aa11.59□□□□□ -0.55
SPIDR-227ENST00000541342 RPL18AQ02543 176 aaKnown RBP11.59□□□□□ -0.55
SPIDR-227ENST00000541342 LELP1Q5T871 98 aa11.59□□□□□ -0.55
SPIDR-227ENST00000541342 IGLV10-54A0A075B6I4 117 aa11.59□□□□□ -0.55
SPIDR-227ENST00000541342 CCKP06307 115 aa11.59□□□□□ -0.55
SPIDR-227ENST00000541342 CD164L2Q6UWJ8 174 aa11.58□□□□□ -0.55
SPIDR-227ENST00000541342 NDUFC2O95298 119 aa11.58□□□□□ -0.56
SPIDR-227ENST00000541342 CHCHD10Q8WYQ3 142 aaPredicted RBP11.58□□□□□ -0.56
SPIDR-227ENST00000541342 MGAM2Q2M2H8 2515 aa11.58□□□□□ -0.56
SPIDR-227ENST00000541342 LYPD5Q6UWN5 251 aa11.58□□□□□ -0.56
SPIDR-227ENST00000541342 CRYGAP11844 174 aa11.57□□□□□ -0.56
SPIDR-227ENST00000541342 KPRPQ5T749 579 aaPredicted RBP11.57□□□□□ -0.56
SPIDR-227ENST00000541342 ANGP03950 147 aaKnown RBP11.57□□□□□ -0.56
SPIDR-227ENST00000541342 COX17Q14061 63 aa11.57□□□□□ -0.56
SPIDR-227ENST00000541342 H3BNG1 76 aa11.56□□□□□ -0.56
SPIDR-227ENST00000541342 A0A1B0GX51 115 aa11.55□□□□□ -0.56
SPIDR-227ENST00000541342 C11orf45Q8TAV5 145 aa11.55□□□□□ -0.56
SPIDR-227ENST00000541342 REG3AQ06141 175 aa11.55□□□□□ -0.56
SPIDR-227ENST00000541342 MRAPQ8TCY5 172 aa11.55□□□□□ -0.56
SPIDR-227ENST00000541342 TM2D3Q9BRN9 247 aa11.54□□□□□ -0.56
SPIDR-227ENST00000541342 hADV29S1A0JD25 119 aa11.53□□□□□ -0.56
SPIDR-227ENST00000541342 C6orf99Q4VX62 202 aa11.53□□□□□ -0.56
SPIDR-227ENST00000541342 C10orf25Q5T742 122 aa11.53□□□□□ -0.56
SPIDR-227ENST00000541342 CFAP161Q6P656 301 aa11.53□□□□□ -0.56
SPIDR-227ENST00000541342 TMEM256-PLSCR3K7ERE1 68 aa11.52□□□□□ -0.56
SPIDR-227ENST00000541342 JMJD7-PLA2G4BH0Y9G9 81 aa11.52□□□□□ -0.57
SPIDR-227ENST00000541342 UPK3BQ9BT76 320 aa11.52□□□□□ -0.57
SPIDR-227ENST00000541342 DEFB131BA0A096LNP1 70 aa11.52□□□□□ -0.57
SPIDR-227ENST00000541342 USP17L23D6RBM5 183 aa11.52□□□□□ -0.57
SPIDR-227ENST00000541342 C6orf223Q8N319 242 aa11.52□□□□□ -0.57
SPIDR-227ENST00000541342 DNAH9Q9NYC9 4486 aa11.51□□□□□ -0.57
SPIDR-227ENST00000541342 COL7A1Q02388 2944 aa11.5□□□□□ -0.57
SPIDR-227ENST00000541342 SERP2Q8N6R1 65 aa11.5□□□□□ -0.57
SPIDR-227ENST00000541342 LOC107984640A0A0U1RRK4 108 aa11.49□□□□□ -0.57
SPIDR-227ENST00000541342 WFDC10BQ8IUB3 73 aa11.49□□□□□ -0.57
SPIDR-227ENST00000541342 KLK12Q9UKR0 248 aa11.49□□□□□ -0.57
SPIDR-227ENST00000541342 UNQ6190/PRO20217Q6UXQ8 127 aa11.49□□□□□ -0.57
SPIDR-227ENST00000541342 LINC00575Q6W349 94 aa11.48□□□□□ -0.57
SPIDR-227ENST00000541342 PRR34Q9NV39 138 aa11.48□□□□□ -0.57
SPIDR-227ENST00000541342 ESRGQ1W209 222 aa11.48□□□□□ -0.57
SPIDR-227ENST00000541342 ENHOQ6UWT2 76 aa11.47□□□□□ -0.57
SPIDR-227ENST00000541342 FAM19A1Q7Z5A9 133 aa11.46□□□□□ -0.58
SPIDR-227ENST00000541342 S100A7L2Q5SY68 101 aa11.44□□□□□ -0.58
SPIDR-227ENST00000541342 M0R2N4 97 aa11.44□□□□□ -0.58
SPIDR-227ENST00000541342 SPAG11BQ08648 103 aa11.44□□□□□ -0.58
SPIDR-227ENST00000541342 IGLV6-57P01721 117 aa11.43□□□□□ -0.58
SPIDR-227ENST00000541342 Q6ZQT0 140 aa11.43□□□□□ -0.58
SPIDR-227ENST00000541342 ATP5EP2Q5VTU8 51 aa11.42□□□□□ -0.58
SPIDR-227ENST00000541342 TRAV10A0A0B4J240 114 aa11.41□□□□□ -0.58
SPIDR-227ENST00000541342 TRAV23DV6A0A075B6W5 121 aa11.4□□□□□ -0.58
SPIDR-227ENST00000541342 DNAH1Q9P2D7 4330 aa11.4□□□□□ -0.59
SPIDR-227ENST00000541342 J3KT08 172 aa11.39□□□□□ -0.59
SPIDR-227ENST00000541342 ZNF561-AS1K7EIQ3 104 aa11.39□□□□□ -0.59
SPIDR-227ENST00000541342 LOC110117498A0A087WWA1 95 aa11.39□□□□□ -0.59
SPIDR-227ENST00000541342 RBM3P98179 157 aaKnown RBP11.39□□□□□ -0.59
SPIDR-227ENST00000541342 LYSTQ99698 3801 aa11.39□□□□□ -0.59
SPIDR-227ENST00000541342 UBL5Q9BZL1 73 aa11.38□□□□□ -0.59
SPIDR-227ENST00000541342 GHRHP01286 108 aa11.37□□□□□ -0.59
SPIDR-227ENST00000541342 C6orf48Q9UBA6 75 aa11.37□□□□□ -0.59
SPIDR-227ENST00000541342 Q6ZQY7 126 aa11.37□□□□□ -0.59
SPIDR-227ENST00000541342 TRBV10-3A0A0K0K1G6 114 aa11.36□□□□□ -0.59
SPIDR-227ENST00000541342 TMEM258P61165 79 aa11.36□□□□□ -0.59
SPIDR-227ENST00000541342 MUC7Q8TAX7 377 aa11.36□□□□□ -0.59
SPIDR-227ENST00000541342 KRTAP26-1Q6PEX3 210 aa11.36□□□□□ -0.59
SPIDR-227ENST00000541342 DNHD1Q96M86 4753 aa11.36□□□□□ -0.59
SPIDR-227ENST00000541342 GVQW2A0A096LPI5 108 aaPredicted RBP11.35□□□□□ -0.59
SPIDR-227ENST00000541342 RPS28P62857 69 aaKnown RBP11.35□□□□□ -0.59
SPIDR-227ENST00000541342 LINC01556Q5JQF7 62 aa11.35□□□□□ -0.59
SPIDR-227ENST00000541342 FAM19A5Q7Z5A7 132 aaPredicted RBP11.35□□□□□ -0.59
SPIDR-227ENST00000541342 XAGE1AQ9HD64 81 aa11.35□□□□□ -0.59
SPIDR-227ENST00000541342 LAMTOR3Q9UHA4 124 aa11.35□□□□□ -0.59
SPIDR-227ENST00000541342 DPH3Q96FX2 82 aa11.35□□□□□ -0.59
SPIDR-227ENST00000541342 STAB2Q8WWQ8 2551 aa11.34□□□□□ -0.59
SPIDR-227ENST00000541342 OXTP01178 125 aa11.34□□□□□ -0.59
SPIDR-227ENST00000541342 DYNC2H1Q8NCM8 4307 aaKnown RBP11.33□□□□□ -0.59
SPIDR-227ENST00000541342 LINC00588Q9Y4M8 146 aa11.33□□□□□ -0.6
SPIDR-227ENST00000541342 LINC01547P58512 204 aaPredicted RBP11.32□□□□□ -0.6
SPIDR-227ENST00000541342 DSCR8Q96T75 97 aa11.32□□□□□ -0.6
SPIDR-227ENST00000541342 CSMD3Q7Z407 3707 aa11.31□□□□□ -0.6
SPIDR-227ENST00000541342 Q6ZVQ6 151 aa11.31□□□□□ -0.6
SPIDR-227ENST00000541342 PRKDCP78527 4128 aaKnown RBP11.31□□□□□ -0.6
SPIDR-227ENST00000541342 DNAH10OSP0CZ25 163 aa11.31□□□□□ -0.6
SPIDR-227ENST00000541342 B9D2Q9BPU9 175 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms