RNA–Protein interactions for RNA: ENST00000541216.1

RAP1B-224, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAP1B, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-224ENST00000541216 BATFQ16520 125 aa0.63□□□□□ -2.31
RAP1B-224ENST00000541216 IQCJQ1A5X6 159 aa0.63□□□□□ -2.31
RAP1B-224ENST00000541216 Q6AWC8 147 aa0.63□□□□□ -2.31
RAP1B-224ENST00000541216 XAF1Q6GPH4 301 aa0.63□□□□□ -2.31
RAP1B-224ENST00000541216 HRCT1Q6UXD1 115 aa0.63□□□□□ -2.31
RAP1B-224ENST00000541216 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.63□□□□□ -2.31
RAP1B-224ENST00000541216 TRGV9Q99603 122 aa0.63□□□□□ -2.31
RAP1B-224ENST00000541216 LIMD2Q9BT23 127 aa0.63□□□□□ -2.31
RAP1B-224ENST00000541216 EFCAB1Q9HAE3 211 aa0.63□□□□□ -2.31
RAP1B-224ENST00000541216 SCN3BQ9NY72 215 aa0.63□□□□□ -2.31
RAP1B-224ENST00000541216 NKIRAS1Q9NYS0 192 aa0.63□□□□□ -2.31
RAP1B-224ENST00000541216 C6orf48Q9UBA6 75 aa0.63□□□□□ -2.31
RAP1B-224ENST00000541216 CEBPZOSA8MTT3 80 aa0.62□□□□□ -2.31
RAP1B-224ENST00000541216 HYPMO75409 117 aa0.62□□□□□ -2.31
RAP1B-224ENST00000541216 CFDP00746 253 aaPredicted RBP0.62□□□□□ -2.31
RAP1B-224ENST00000541216 CTXN2P0C2S0 81 aa0.62□□□□□ -2.31
RAP1B-224ENST00000541216 HIST1H1EP10412 219 aaKnown RBP0.62□□□□□ -2.31
RAP1B-224ENST00000541216 HIST1H1DP16402 221 aaKnown RBP0.62□□□□□ -2.31
RAP1B-224ENST00000541216 DEFA1P59665 94 aa0.62□□□□□ -2.31
RAP1B-224ENST00000541216 CCL20P78556 96 aa0.62□□□□□ -2.31
RAP1B-224ENST00000541216 TMEM97Q5BJF2 176 aa0.62□□□□□ -2.31
RAP1B-224ENST00000541216 NMSQ5H8A3 153 aa0.62□□□□□ -2.31
RAP1B-224ENST00000541216 COQ5Q5HYK3 327 aa0.62□□□□□ -2.31
RAP1B-224ENST00000541216 C9orf153Q5TBE3 101 aa0.62□□□□□ -2.31
RAP1B-224ENST00000541216 IZUMO2Q6UXV1 221 aa0.62□□□□□ -2.31
RAP1B-224ENST00000541216 CCDC32Q9BV29 185 aa0.62□□□□□ -2.31
RAP1B-224ENST00000541216 MRPL35Q9NZE8 188 aaKnown RBP0.62□□□□□ -2.31
RAP1B-224ENST00000541216 SNURFQ9Y675 71 aa0.62□□□□□ -2.31
RAP1B-224ENST00000541216 TRAV21A0A0B4J279 112 aa0.61□□□□□ -2.31
RAP1B-224ENST00000541216 A0A0G2JND7 137 aa0.61□□□□□ -2.31
RAP1B-224ENST00000541216 FABP5P3A8MUU1 101 aa0.61□□□□□ -2.31
RAP1B-224ENST00000541216 TMEM238C9JI98 176 aa0.61□□□□□ -2.31
RAP1B-224ENST00000541216 NDUFA1O15239 70 aa0.61□□□□□ -2.31
RAP1B-224ENST00000541216 ERC2-IT1O76042 136 aa0.61□□□□□ -2.31
RAP1B-224ENST00000541216 IGLC2P0DOY2 106 aa0.61□□□□□ -2.31
RAP1B-224ENST00000541216 SPCS3P61009 180 aa0.61□□□□□ -2.31
RAP1B-224ENST00000541216 ZNF56Q15929 161 aa0.61□□□□□ -2.31
RAP1B-224ENST00000541216 ARPINQ7Z6K5 226 aa0.61□□□□□ -2.31
RAP1B-224ENST00000541216 BPIFA4PQ86YQ2 179 aa0.61□□□□□ -2.31
RAP1B-224ENST00000541216 ACBD7Q8N6N7 88 aa0.61□□□□□ -2.31
RAP1B-224ENST00000541216 BTF3L4Q96K17 158 aa0.61□□□□□ -2.31
RAP1B-224ENST00000541216 CNBD2Q96M20 576 aa0.61□□□□□ -2.31
RAP1B-224ENST00000541216 GID8Q9NWU2 228 aa0.61□□□□□ -2.31
RAP1B-224ENST00000541216 PAIP2BQ9ULR5 123 aaKnown RBP0.61□□□□□ -2.31
RAP1B-224ENST00000541216 LINC00959A0A1B0GUT2 108 aa0.6□□□□□ -2.31
RAP1B-224ENST00000541216 BBIP1A8MTZ0 92 aa0.6□□□□□ -2.31
RAP1B-224ENST00000541216 MT1EP04732 61 aa0.6□□□□□ -2.31
RAP1B-224ENST00000541216 IL5P05113 134 aa0.6□□□□□ -2.31
RAP1B-224ENST00000541216 MYL12AP19105 171 aa0.6□□□□□ -2.31
RAP1B-224ENST00000541216 S100A4P26447 101 aaKnown RBP0.6□□□□□ -2.31
RAP1B-224ENST00000541216 RPS25P62851 125 aaKnown RBP0.6□□□□□ -2.31
RAP1B-224ENST00000541216 C12orf73Q69YU5 71 aa0.6□□□□□ -2.31
RAP1B-224ENST00000541216 PATE2Q6UY27 113 aa0.6□□□□□ -2.31
RAP1B-224ENST00000541216 SOSTDC1Q6X4U4 206 aa0.6□□□□□ -2.31
RAP1B-224ENST00000541216 SSBP3-AS1Q7Z2R9 100 aa0.6□□□□□ -2.31
RAP1B-224ENST00000541216 LINC00305Q7Z4B0 112 aa0.6□□□□□ -2.31
RAP1B-224ENST00000541216 MT1MQ8N339 61 aa0.6□□□□□ -2.31
RAP1B-224ENST00000541216 CANT1Q8WVQ1 401 aa0.6□□□□□ -2.31
RAP1B-224ENST00000541216 PTH2Q96A98 100 aa0.6□□□□□ -2.31
RAP1B-224ENST00000541216 TMEM126AQ9H061 195 aa0.6□□□□□ -2.31
RAP1B-224ENST00000541216 FXYD6Q9H0Q3 95 aa0.6□□□□□ -2.31
RAP1B-224ENST00000541216 TRBV20OR9-2A0A075B6H5 130 aa0.59□□□□□ -2.31
RAP1B-224ENST00000541216 TRBV19A0A075B6N1 114 aa0.59□□□□□ -2.31
RAP1B-224ENST00000541216 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.59□□□□□ -2.31
RAP1B-224ENST00000541216 LOC110117498A0A087WWA1 95 aa0.59□□□□□ -2.31
RAP1B-224ENST00000541216 H3BVH4 76 aa0.59□□□□□ -2.31
RAP1B-224ENST00000541216 FAM107AO95990 144 aa0.59□□□□□ -2.31
RAP1B-224ENST00000541216 RAB5BP61020 215 aa0.59□□□□□ -2.31
RAP1B-224ENST00000541216 RPL22L1Q6P5R6 122 aaKnown RBP0.59□□□□□ -2.31
RAP1B-224ENST00000541216 CYP2G1PQ6ZSU1 146 aa0.59□□□□□ -2.31
RAP1B-224ENST00000541216 S100A7AQ86SG5 101 aa0.59□□□□□ -2.31
RAP1B-224ENST00000541216 C5orf38Q86SI9 138 aa0.59□□□□□ -2.31
RAP1B-224ENST00000541216 DNAJC9Q8WXX5 260 aa0.59□□□□□ -2.31
RAP1B-224ENST00000541216 BORCS5Q969J3 196 aa0.59□□□□□ -2.31
RAP1B-224ENST00000541216 TMEM242Q9NWH2 141 aa0.59□□□□□ -2.31
RAP1B-224ENST00000541216 M0R378 163 aa0.58□□□□□ -2.32
RAP1B-224ENST00000541216 PYYP10082 97 aa0.58□□□□□ -2.32
RAP1B-224ENST00000541216 MT1GP13640 62 aa0.58□□□□□ -2.32
RAP1B-224ENST00000541216 GNG2P59768 71 aa0.58□□□□□ -2.32
RAP1B-224ENST00000541216 GNG11P61952 73 aa0.58□□□□□ -2.32
RAP1B-224ENST00000541216 KRTAP19-7Q3SYF9 63 aa0.58□□□□□ -2.32
RAP1B-224ENST00000541216 CCDC58Q4VC31 144 aa0.58□□□□□ -2.32
RAP1B-224ENST00000541216 C2orf82Q6UX34 121 aa0.58□□□□□ -2.32
RAP1B-224ENST00000541216 Q6ZQT0 140 aa0.58□□□□□ -2.32
RAP1B-224ENST00000541216 Q96NJ1 140 aa0.58□□□□□ -2.32
RAP1B-224ENST00000541216 SLC25A21Q9BQT8 299 aaPredicted RBP0.58□□□□□ -2.32
RAP1B-224ENST00000541216 C9orf170A2RU37 121 aa0.57□□□□□ -2.32
RAP1B-224ENST00000541216 ZNF727A8MUV8 499 aa0.57□□□□□ -2.32
RAP1B-224ENST00000541216 GNGT2O14610 69 aa0.57□□□□□ -2.32
RAP1B-224ENST00000541216 IAPPP10997 89 aa0.57□□□□□ -2.32
RAP1B-224ENST00000541216 FGF7P21781 194 aa0.57□□□□□ -2.32
RAP1B-224ENST00000541216 S100GP29377 79 aa0.57□□□□□ -2.32
RAP1B-224ENST00000541216 FOXA3P55318 350 aaPredicted RBP0.57□□□□□ -2.32
RAP1B-224ENST00000541216 RAB4BP61018 213 aa0.57□□□□□ -2.32
RAP1B-224ENST00000541216 COTL1Q14019 142 aa0.57□□□□□ -2.32
RAP1B-224ENST00000541216 IAH1Q2TAA2 248 aaPredicted RBP0.57□□□□□ -2.32
RAP1B-224ENST00000541216 AKAP14Q86UN6 197 aa0.57□□□□□ -2.32
RAP1B-224ENST00000541216 CLVS1Q8IUQ0 354 aaPredicted RBP0.57□□□□□ -2.32
RAP1B-224ENST00000541216 TP53RKQ96S44 253 aa0.57□□□□□ -2.32
RAP1B-224ENST00000541216 WDR61Q9GZS3 305 aaKnown RBP0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms