RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 MAP1LC3CQ9BXW4 147 aa7.96□□□□□ -1.14
LTBR-208ENST00000541005 TNXBP22105 4242 aa7.95□□□□□ -1.14
LTBR-208ENST00000541005 LEPROTO15243 131 aa7.94□□□□□ -1.14
LTBR-208ENST00000541005 IGKCP01834 107 aa7.94□□□□□ -1.14
LTBR-208ENST00000541005 KRTAP10-8P60410 259 aa7.94□□□□□ -1.14
LTBR-208ENST00000541005 PLEKHB2Q96CS7 222 aa7.94□□□□□ -1.14
LTBR-208ENST00000541005 NDUFA12Q9UI09 145 aa7.94□□□□□ -1.14
LTBR-208ENST00000541005 SYS1-DBNDD2H3BUS1 97 aa7.93□□□□□ -1.14
LTBR-208ENST00000541005 ZNF861PO60384 105 aa7.93□□□□□ -1.14
LTBR-208ENST00000541005 BCE1O60756 84 aa7.93□□□□□ -1.14
LTBR-208ENST00000541005 TSPEAR-AS2P59090 65 aa7.93□□□□□ -1.14
LTBR-208ENST00000541005 HERVK_113P61574 105 aa7.93□□□□□ -1.14
LTBR-208ENST00000541005 RPL24P83731 157 aaKnown RBP7.93□□□□□ -1.14
LTBR-208ENST00000541005 PMCHL2Q9BQD1 86 aa7.93□□□□□ -1.14
LTBR-208ENST00000541005 MYMXA0A1B0GTQ4 84 aa7.92□□□□□ -1.14
LTBR-208ENST00000541005 RPL37AP8A6NKH3 93 aa7.92□□□□□ -1.14
LTBR-208ENST00000541005 LINC00587B1AMM8 73 aa7.92□□□□□ -1.14
LTBR-208ENST00000541005 LINC00158P58513 81 aa7.92□□□□□ -1.14
LTBR-208ENST00000541005 Q8NDZ9 215 aa7.92□□□□□ -1.14
LTBR-208ENST00000541005 GAGE10A6NGK3 116 aa7.91□□□□□ -1.14
LTBR-208ENST00000541005 J3QQQ9 107 aa7.91□□□□□ -1.14
LTBR-208ENST00000541005 KRTAP1-4P0C5Y4 121 aa7.91□□□□□ -1.14
LTBR-208ENST00000541005 SMIM13P0DJ93 91 aa7.91□□□□□ -1.14
LTBR-208ENST00000541005 NMUP48645 174 aa7.91□□□□□ -1.14
LTBR-208ENST00000541005 S100A1P23297 94 aa7.9□□□□□ -1.14
LTBR-208ENST00000541005 MEIG1Q5JSS6 88 aa7.9□□□□□ -1.14
LTBR-208ENST00000541005 LINC01545Q5VT33 79 aa7.9□□□□□ -1.14
LTBR-208ENST00000541005 IGLV1-50A0A075B6I6 118 aa7.89□□□□□ -1.15
LTBR-208ENST00000541005 RPL28P46779 137 aaKnown RBP7.89□□□□□ -1.15
LTBR-208ENST00000541005 PET117Q6UWS5 81 aa7.89□□□□□ -1.15
LTBR-208ENST00000541005 KRTAP13-1Q8IUC0 172 aa7.89□□□□□ -1.15
LTBR-208ENST00000541005 MIR7-3HGQ8N6C7 128 aa7.89□□□□□ -1.15
LTBR-208ENST00000541005 IGKV2-28A0A075B6P5 120 aa7.88□□□□□ -1.15
LTBR-208ENST00000541005 A0A0U1RRA0 63 aa7.88□□□□□ -1.15
LTBR-208ENST00000541005 E9PLD3 99 aa7.88□□□□□ -1.15
LTBR-208ENST00000541005 IGKV2D-28P01615 120 aa7.88□□□□□ -1.15
LTBR-208ENST00000541005 LGALS3P17931 250 aaKnown RBP7.88□□□□□ -1.15
LTBR-208ENST00000541005 LOC107984156A0A0G2JMH3 177 aa7.87□□□□□ -1.15
LTBR-208ENST00000541005 ATP6V1G1O75348 118 aa7.87□□□□□ -1.15
LTBR-208ENST00000541005 ARL17AQ8IVW1 177 aa7.87□□□□□ -1.15
LTBR-208ENST00000541005 C3orf79P0CE67 100 aa7.86□□□□□ -1.15
LTBR-208ENST00000541005 BOD1L2Q8IYS8 172 aa7.86□□□□□ -1.15
LTBR-208ENST00000541005 IGKV2D-26A0A0A0MRZ7 120 aa7.85□□□□□ -1.15
LTBR-208ENST00000541005 M0R378 163 aa7.85□□□□□ -1.15
LTBR-208ENST00000541005 PRR26Q8N8Z3 221 aa7.85□□□□□ -1.15
LTBR-208ENST00000541005 TMEM126AQ9H061 195 aa7.85□□□□□ -1.15
LTBR-208ENST00000541005 TMEM238C9JI98 176 aa7.84□□□□□ -1.15
LTBR-208ENST00000541005 RPL13AP40429 203 aaKnown RBP7.83□□□□□ -1.16
LTBR-208ENST00000541005 UBE2AP49459 152 aa7.83□□□□□ -1.16
LTBR-208ENST00000541005 A0A0J9YXY3 114 aa7.82□□□□□ -1.16
LTBR-208ENST00000541005 KRTDAPP60985 99 aa7.82□□□□□ -1.16
LTBR-208ENST00000541005 DAND5Q8N907 189 aa7.82□□□□□ -1.16
LTBR-208ENST00000541005 PRYO14603 147 aa7.81□□□□□ -1.16
LTBR-208ENST00000541005 TRBV10-2A0A0K0K1G8 114 aa7.8□□□□□ -1.16
LTBR-208ENST00000541005 C20orf202A1L168 122 aa7.8□□□□□ -1.16
LTBR-208ENST00000541005 NCR3O14931 201 aa7.8□□□□□ -1.16
LTBR-208ENST00000541005 SPRR1AP35321 89 aa7.8□□□□□ -1.16
LTBR-208ENST00000541005 PRLHP81277 87 aa7.8□□□□□ -1.16
LTBR-208ENST00000541005 FAM19A1Q7Z5A9 133 aa7.8□□□□□ -1.16
LTBR-208ENST00000541005 KCNQ1DNQ9H478 68 aa7.8□□□□□ -1.16
LTBR-208ENST00000541005 TIMM17BO60830 172 aa7.79□□□□□ -1.16
LTBR-208ENST00000541005 NDUFC2O95298 119 aa7.79□□□□□ -1.16
LTBR-208ENST00000541005 LITAFQ99732 161 aa7.79□□□□□ -1.16
LTBR-208ENST00000541005 MIEN1Q9BRT3 115 aa7.79□□□□□ -1.16
LTBR-208ENST00000541005 TRBV10-3A0A0K0K1G6 114 aa7.78□□□□□ -1.16
LTBR-208ENST00000541005 AKR1D1P51857 326 aa7.78□□□□□ -1.16
LTBR-208ENST00000541005 ADAMTSL4-AS1Q5T5F5 129 aa7.78□□□□□ -1.16
LTBR-208ENST00000541005 SOSTDC1Q6X4U4 206 aa7.78□□□□□ -1.16
LTBR-208ENST00000541005 LINC00337Q8N6G1 96 aa7.78□□□□□ -1.16
LTBR-208ENST00000541005 SPANXB1Q9NS25 103 aaPredicted RBP7.78□□□□□ -1.16
LTBR-208ENST00000541005 HMCN2Q8NDA2 5059 aa7.78□□□□□ -1.16
LTBR-208ENST00000541005 A0A087X002 238 aa7.77□□□□□ -1.17
LTBR-208ENST00000541005 KRTAP4-16G5E9R7 235 aaPredicted RBP7.77□□□□□ -1.17
LTBR-208ENST00000541005 FAM229BQ4G0N7 80 aa7.77□□□□□ -1.17
LTBR-208ENST00000541005 HIST3H2BBQ8N257 126 aa7.77□□□□□ -1.17
LTBR-208ENST00000541005 ZNF815PA8K554 130 aa7.76□□□□□ -1.17
LTBR-208ENST00000541005 EIF4EBP3O60516 100 aaPredicted RBP7.76□□□□□ -1.17
LTBR-208ENST00000541005 CRYGAP11844 174 aa7.76□□□□□ -1.17
LTBR-208ENST00000541005 HIST1H2BLQ99880 126 aa7.76□□□□□ -1.17
LTBR-208ENST00000541005 IGLV6-57P01721 117 aa7.75□□□□□ -1.17
LTBR-208ENST00000541005 DDTP30046 118 aa7.74□□□□□ -1.17
LTBR-208ENST00000541005 S100A12P80511 92 aa7.74□□□□□ -1.17
LTBR-208ENST00000541005 ANKRD39Q53RE8 183 aa7.74□□□□□ -1.17
LTBR-208ENST00000541005 TTTY13Q9BZ97 58 aa7.74□□□□□ -1.17
LTBR-208ENST00000541005 S100A2P29034 98 aa7.73□□□□□ -1.17
LTBR-208ENST00000541005 LINC00308Q8TCZ7 52 aa7.73□□□□□ -1.17
LTBR-208ENST00000541005 HIGD2AQ9BW72 106 aa7.73□□□□□ -1.17
LTBR-208ENST00000541005 SNRPEP62304 92 aaKnown RBP7.72□□□□□ -1.17
LTBR-208ENST00000541005 KRTAP13-2Q52LG2 175 aa7.72□□□□□ -1.17
LTBR-208ENST00000541005 ATOH7Q8N100 152 aa7.72□□□□□ -1.17
LTBR-208ENST00000541005 SPANXCQ9NY87 97 aa7.72□□□□□ -1.17
LTBR-208ENST00000541005 ETDCA0A1B0GVM5 59 aa7.71□□□□□ -1.18
LTBR-208ENST00000541005 S100A6P06703 90 aa7.71□□□□□ -1.18
LTBR-208ENST00000541005 NPC2P61916 151 aa7.71□□□□□ -1.18
LTBR-208ENST00000541005 PPDPFQ9H3Y8 114 aa7.71□□□□□ -1.18
LTBR-208ENST00000541005 ANAPC11Q9NYG5 84 aa7.71□□□□□ -1.18
LTBR-208ENST00000541005 B5MCH6 92 aa7.7□□□□□ -1.18
LTBR-208ENST00000541005 S100A7L2Q5SY68 101 aa7.7□□□□□ -1.18
LTBR-208ENST00000541005 TYMSOSQ8TAI1 123 aa7.7□□□□□ -1.18
LTBR-208ENST00000541005 SPRR4Q96PI1 79 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms