RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 S100A7L2Q5SY68 101 aa7.05□□□□□ -1.28
CDC42SE1-207ENST00000540998 NSD1Q96L73 2696 aaPredicted RBP7.05□□□□□ -1.28
CDC42SE1-207ENST00000540998 SERP2Q8N6R1 65 aa7.05□□□□□ -1.28
CDC42SE1-207ENST00000540998 GHRHP01286 108 aa7.04□□□□□ -1.28
CDC42SE1-207ENST00000540998 SCXQ7RTU7 201 aa7.04□□□□□ -1.28
CDC42SE1-207ENST00000540998 PRO0255Q9UI72 69 aa7.04□□□□□ -1.28
CDC42SE1-207ENST00000540998 LAMTOR3Q9UHA4 124 aa7.03□□□□□ -1.28
CDC42SE1-207ENST00000540998 A0A1B0GUV1 79 aa7.02□□□□□ -1.29
CDC42SE1-207ENST00000540998 CD164L2Q6UWJ8 174 aa7.02□□□□□ -1.29
CDC42SE1-207ENST00000540998 FBN1P35555 2871 aaKnown RBP7.02□□□□□ -1.29
CDC42SE1-207ENST00000540998 J3KT08 172 aa7.02□□□□□ -1.29
CDC42SE1-207ENST00000540998 C20orf197Q8N268 126 aa7.02□□□□□ -1.29
CDC42SE1-207ENST00000540998 KLK12Q9UKR0 248 aa7.02□□□□□ -1.29
CDC42SE1-207ENST00000540998 Q6ZQY7 126 aa7.02□□□□□ -1.29
CDC42SE1-207ENST00000540998 CYSRT1A8MQ03 144 aa7.01□□□□□ -1.29
CDC42SE1-207ENST00000540998 HAMPP81172 84 aa7.01□□□□□ -1.29
CDC42SE1-207ENST00000540998 SPAG11BQ08648 103 aa7.01□□□□□ -1.29
CDC42SE1-207ENST00000540998 NOTCH1P46531 2555 aa7.01□□□□□ -1.29
CDC42SE1-207ENST00000540998 TMEM256-PLSCR3K7ERE1 68 aa7.01□□□□□ -1.29
CDC42SE1-207ENST00000540998 DPH3Q96FX2 82 aa7.01□□□□□ -1.29
CDC42SE1-207ENST00000540998 LINC00167Q96N53 147 aa7.01□□□□□ -1.29
CDC42SE1-207ENST00000540998 IGHV4-28A0A0C4DH34 117 aa7□□□□□ -1.29
CDC42SE1-207ENST00000540998 LINC00575Q6W349 94 aa7□□□□□ -1.29
CDC42SE1-207ENST00000540998 LINC00612Q8N6U2 182 aa7□□□□□ -1.29
CDC42SE1-207ENST00000540998 FLNBO75369 2602 aaKnown RBP7□□□□□ -1.29
CDC42SE1-207ENST00000540998 MAST4O15021 2626 aa7□□□□□ -1.29
CDC42SE1-207ENST00000540998 HIGD2BQ4VC39 106 aa7□□□□□ -1.29
CDC42SE1-207ENST00000540998 TRAV10A0A0B4J240 114 aa6.99□□□□□ -1.29
CDC42SE1-207ENST00000540998 TRBV10-3A0A0K0K1G6 114 aa6.99□□□□□ -1.29
CDC42SE1-207ENST00000540998 JMJD7-PLA2G4BH0Y9G9 81 aa6.99□□□□□ -1.29
CDC42SE1-207ENST00000540998 CMC4P56277 68 aaPredicted RBP6.98□□□□□ -1.29
CDC42SE1-207ENST00000540998 DAD1P61803 113 aa6.98□□□□□ -1.29
CDC42SE1-207ENST00000540998 C4orf26Q17RF5 130 aa6.98□□□□□ -1.29
CDC42SE1-207ENST00000540998 Q6ZQT0 140 aa6.98□□□□□ -1.29
CDC42SE1-207ENST00000540998 ANK2Q01484 3957 aa6.98□□□□□ -1.29
CDC42SE1-207ENST00000540998 RBM3P98179 157 aaKnown RBP6.98□□□□□ -1.29
CDC42SE1-207ENST00000540998 UBL5Q9BZL1 73 aa6.98□□□□□ -1.29
CDC42SE1-207ENST00000540998 SNURFQ9Y675 71 aa6.98□□□□□ -1.29
CDC42SE1-207ENST00000540998 STAB1Q9NY15 2570 aa6.97□□□□□ -1.29
CDC42SE1-207ENST00000540998 C16orf95Q9H693 158 aa6.97□□□□□ -1.29
CDC42SE1-207ENST00000540998 SMIM9A6NGZ8 99 aa6.96□□□□□ -1.29
CDC42SE1-207ENST00000540998 NDUFC2O95298 119 aa6.96□□□□□ -1.29
CDC42SE1-207ENST00000540998 Q8N9L7 120 aa6.96□□□□□ -1.29
CDC42SE1-207ENST00000540998 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.96□□□□□ -1.3
CDC42SE1-207ENST00000540998 LINC01547P58512 204 aaPredicted RBP6.96□□□□□ -1.3
CDC42SE1-207ENST00000540998 Q6ZVQ6 151 aa6.96□□□□□ -1.3
CDC42SE1-207ENST00000540998 C6orf48Q9UBA6 75 aa6.96□□□□□ -1.3
CDC42SE1-207ENST00000540998 TMEM258P61165 79 aa6.94□□□□□ -1.3
CDC42SE1-207ENST00000540998 COX17Q14061 63 aa6.94□□□□□ -1.3
CDC42SE1-207ENST00000540998 HRCT1Q6UXD1 115 aa6.94□□□□□ -1.3
CDC42SE1-207ENST00000540998 ZNF561-AS1K7EIQ3 104 aa6.93□□□□□ -1.3
CDC42SE1-207ENST00000540998 RMI2Q96E14 147 aa6.93□□□□□ -1.3
CDC42SE1-207ENST00000540998 IGLV6-57P01721 117 aa6.93□□□□□ -1.3
CDC42SE1-207ENST00000540998 RETNQ9HD89 108 aa6.93□□□□□ -1.3
CDC42SE1-207ENST00000540998 WFDC10BQ8IUB3 73 aa6.92□□□□□ -1.3
CDC42SE1-207ENST00000540998 COL6A5A8TX70 2615 aa6.92□□□□□ -1.3
CDC42SE1-207ENST00000540998 LYPD5Q6UWN5 251 aa6.92□□□□□ -1.3
CDC42SE1-207ENST00000540998 Q8NAQ8 132 aa6.92□□□□□ -1.3
CDC42SE1-207ENST00000540998 MUC7Q8TAX7 377 aa6.91□□□□□ -1.3
CDC42SE1-207ENST00000540998 CSMD3Q7Z407 3707 aa6.91□□□□□ -1.3
CDC42SE1-207ENST00000540998 LYRM9A8MSI8 78 aa6.91□□□□□ -1.3
CDC42SE1-207ENST00000540998 TM2D3Q9BRN9 247 aa6.91□□□□□ -1.3
CDC42SE1-207ENST00000540998 Q5XG85 94 aa6.9□□□□□ -1.3
CDC42SE1-207ENST00000540998 NBEAL1Q6ZS30 2694 aa6.9□□□□□ -1.3
CDC42SE1-207ENST00000540998 ZNF73O43830 326 aaPredicted RBP6.9□□□□□ -1.31
CDC42SE1-207ENST00000540998 DIRC1Q969H9 104 aa6.9□□□□□ -1.31
CDC42SE1-207ENST00000540998 SRRM2Q9UQ35 2752 aaKnown RBP6.89□□□□□ -1.31
CDC42SE1-207ENST00000540998 ATP5EP2Q5VTU8 51 aa6.89□□□□□ -1.31
CDC42SE1-207ENST00000540998 A0A0J9YWU9 116 aa6.88□□□□□ -1.31
CDC42SE1-207ENST00000540998 H7BZZ5 65 aa6.88□□□□□ -1.31
CDC42SE1-207ENST00000540998 IGHV4-30-4P0DP06 118 aa6.88□□□□□ -1.31
CDC42SE1-207ENST00000540998 RPS28P62857 69 aaKnown RBP6.88□□□□□ -1.31
CDC42SE1-207ENST00000540998 Q6ZRU5 148 aa6.88□□□□□ -1.31
CDC42SE1-207ENST00000540998 DEFB105AQ8NG35 78 aa6.88□□□□□ -1.31
CDC42SE1-207ENST00000540998 LOC110117498A0A087WWA1 95 aa6.88□□□□□ -1.31
CDC42SE1-207ENST00000540998 LELP1Q5T871 98 aa6.88□□□□□ -1.31
CDC42SE1-207ENST00000540998 CAMK2N2Q96S95 79 aa6.88□□□□□ -1.31
CDC42SE1-207ENST00000540998 KMT2BQ9UMN6 2715 aaPredicted RBP6.87□□□□□ -1.31
CDC42SE1-207ENST00000540998 INAFM1C9JVW0 142 aa6.87□□□□□ -1.31
CDC42SE1-207ENST00000540998 C3orf84H3BNL1 204 aa6.87□□□□□ -1.31
CDC42SE1-207ENST00000540998 COX7BP24311 80 aa6.87□□□□□ -1.31
CDC42SE1-207ENST00000540998 FAM236DA0A1B0GTK5 79 aa6.87□□□□□ -1.31
CDC42SE1-207ENST00000540998 BPY2O14599 106 aa6.87□□□□□ -1.31
CDC42SE1-207ENST00000540998 FAM236CP0DP71 79 aa6.87□□□□□ -1.31
CDC42SE1-207ENST00000540998 PRR34Q9NV39 138 aa6.87□□□□□ -1.31
CDC42SE1-207ENST00000540998 C5orf47Q569G3 176 aa6.86□□□□□ -1.31
CDC42SE1-207ENST00000540998 F8WEM9 126 aa6.86□□□□□ -1.31
CDC42SE1-207ENST00000540998 SPART-AS1P0CW21 52 aa6.85□□□□□ -1.31
CDC42SE1-207ENST00000540998 VPREB1P12018 145 aa6.85□□□□□ -1.31
CDC42SE1-207ENST00000540998 TRAV7A0A075B6U4 112 aa6.84□□□□□ -1.31
CDC42SE1-207ENST00000540998 TRBV7-4A0A0J9YYF1 115 aa6.84□□□□□ -1.31
CDC42SE1-207ENST00000540998 APOC4P55056 127 aa6.84□□□□□ -1.31
CDC42SE1-207ENST00000540998 C9orf66Q5T8R8 295 aa6.84□□□□□ -1.31
CDC42SE1-207ENST00000540998 ELOF1P60002 83 aaKnown RBP6.83□□□□□ -1.32
CDC42SE1-207ENST00000540998 Q6ZRP5 223 aa6.83□□□□□ -1.32
CDC42SE1-207ENST00000540998 C15orf56Q8N910 161 aa6.83□□□□□ -1.32
CDC42SE1-207ENST00000540998 Q6ZTC4 211 aa6.83□□□□□ -1.32
CDC42SE1-207ENST00000540998 KPRPQ5T749 579 aaPredicted RBP6.82□□□□□ -1.32
CDC42SE1-207ENST00000540998 LINC00474Q9P2X8 69 aa6.82□□□□□ -1.32
CDC42SE1-207ENST00000540998 OXLD1Q5BKU9 147 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms