RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 FAT4Q6V0I7 4981 aa9.59□□□□□ -0.87
TRIM65-203ENST00000540812 FABP4P15090 132 aa9.59□□□□□ -0.87
TRIM65-203ENST00000540812 MRPL55Q7Z7F7 128 aaKnown RBP9.59□□□□□ -0.87
TRIM65-203ENST00000540812 TP73-AS1Q9UF72 201 aa9.59□□□□□ -0.87
TRIM65-203ENST00000540812 TMEM223A0PJW6 202 aa9.57□□□□□ -0.88
TRIM65-203ENST00000540812 H0Y8G0 127 aa9.57□□□□□ -0.88
TRIM65-203ENST00000540812 BCE1O60756 84 aa9.57□□□□□ -0.88
TRIM65-203ENST00000540812 COA6Q5JTJ3 125 aaKnown RBP9.57□□□□□ -0.88
TRIM65-203ENST00000540812 SFTA2Q6UW10 78 aa9.57□□□□□ -0.88
TRIM65-203ENST00000540812 RPL28P46779 137 aaKnown RBP9.56□□□□□ -0.88
TRIM65-203ENST00000540812 LINC00167Q96N53 147 aa9.56□□□□□ -0.88
TRIM65-203ENST00000540812 MAP1LC3CQ9BXW4 147 aa9.56□□□□□ -0.88
TRIM65-203ENST00000540812 RPL37AP8A6NKH3 93 aa9.55□□□□□ -0.88
TRIM65-203ENST00000540812 PLNP26678 52 aa9.55□□□□□ -0.88
TRIM65-203ENST00000540812 ANAPC11Q9NYG5 84 aa9.54□□□□□ -0.88
TRIM65-203ENST00000540812 GAGE10A6NGK3 116 aa9.53□□□□□ -0.88
TRIM65-203ENST00000540812 CRYGAP11844 174 aa9.53□□□□□ -0.88
TRIM65-203ENST00000540812 TYMSOSQ8TAI1 123 aa9.53□□□□□ -0.88
TRIM65-203ENST00000540812 DPM2O94777 84 aa9.52□□□□□ -0.89
TRIM65-203ENST00000540812 COX17Q14061 63 aa9.52□□□□□ -0.89
TRIM65-203ENST00000540812 ZNF625Q96I27 306 aaPredicted RBP9.52□□□□□ -0.89
TRIM65-203ENST00000540812 IGKCP01834 107 aa9.51□□□□□ -0.89
TRIM65-203ENST00000540812 KRTAP13-1Q8IUC0 172 aa9.51□□□□□ -0.89
TRIM65-203ENST00000540812 SYS1-DBNDD2H3BUS1 97 aa9.5□□□□□ -0.89
TRIM65-203ENST00000540812 KRTAP13-2Q52LG2 175 aa9.5□□□□□ -0.89
TRIM65-203ENST00000540812 ERG28Q9UKR5 140 aa9.5□□□□□ -0.89
TRIM65-203ENST00000540812 IGLV5-37A0A075B6J1 123 aa9.49□□□□□ -0.89
TRIM65-203ENST00000540812 PMCHL2Q9BQD1 86 aa9.49□□□□□ -0.89
TRIM65-203ENST00000540812 PFN2P35080 140 aa9.48□□□□□ -0.89
TRIM65-203ENST00000540812 A0A0U1RQV1 116 aa9.47□□□□□ -0.89
TRIM65-203ENST00000540812 LEPROTO15243 131 aa9.47□□□□□ -0.89
TRIM65-203ENST00000540812 UBE2AP49459 152 aa9.47□□□□□ -0.89
TRIM65-203ENST00000540812 HERVK_113P61574 105 aa9.47□□□□□ -0.89
TRIM65-203ENST00000540812 PET117Q6UWS5 81 aa9.47□□□□□ -0.89
TRIM65-203ENST00000540812 HERV-K104P63124 156 aa9.46□□□□□ -0.9
TRIM65-203ENST00000540812 LINC01545Q5VT33 79 aa9.46□□□□□ -0.9
TRIM65-203ENST00000540812 NKAPP1Q8N9T2 125 aa9.46□□□□□ -0.9
TRIM65-203ENST00000540812 PLEKHB2Q96CS7 222 aa9.46□□□□□ -0.9
TRIM65-203ENST00000540812 RETNLBQ9BQ08 111 aa9.46□□□□□ -0.9
TRIM65-203ENST00000540812 IGKV2-28A0A075B6P5 120 aa9.45□□□□□ -0.9
TRIM65-203ENST00000540812 IGKV2D-28P01615 120 aa9.45□□□□□ -0.9
TRIM65-203ENST00000540812 C3orf79P0CE67 100 aa9.45□□□□□ -0.9
TRIM65-203ENST00000540812 NDUFA12Q9UI09 145 aa9.45□□□□□ -0.9
TRIM65-203ENST00000540812 MYMXA0A1B0GTQ4 84 aa9.44□□□□□ -0.9
TRIM65-203ENST00000540812 LINC00587B1AMM8 73 aa9.44□□□□□ -0.9
TRIM65-203ENST00000540812 SND1-IT1Q9HBX3 110 aa9.44□□□□□ -0.9
TRIM65-203ENST00000540812 J3QQQ9 107 aa9.43□□□□□ -0.9
TRIM65-203ENST00000540812 LINC00158P58513 81 aa9.43□□□□□ -0.9
TRIM65-203ENST00000540812 TSPEAR-AS2P59090 65 aa9.43□□□□□ -0.9
TRIM65-203ENST00000540812 FAM229BQ4G0N7 80 aa9.43□□□□□ -0.9
TRIM65-203ENST00000540812 NMUP48645 174 aa9.42□□□□□ -0.9
TRIM65-203ENST00000540812 LINC00304Q8N9R0 145 aa9.42□□□□□ -0.9
TRIM65-203ENST00000540812 KRTAP9-2Q9BYQ4 174 aa9.42□□□□□ -0.9
TRIM65-203ENST00000540812 E9PLD3 99 aa9.41□□□□□ -0.9
TRIM65-203ENST00000540812 KRTDAPP60985 99 aa9.41□□□□□ -0.9
TRIM65-203ENST00000540812 PRLHP81277 87 aa9.41□□□□□ -0.9
TRIM65-203ENST00000540812 MEIG1Q5JSS6 88 aa9.41□□□□□ -0.9
TRIM65-203ENST00000540812 TMEM238C9JI98 176 aa9.4□□□□□ -0.9
TRIM65-203ENST00000540812 SMIM13P0DJ93 91 aa9.4□□□□□ -0.9
TRIM65-203ENST00000540812 VPREB1P12018 145 aa9.4□□□□□ -0.9
TRIM65-203ENST00000540812 LGALS3P17931 250 aaKnown RBP9.4□□□□□ -0.9
TRIM65-203ENST00000540812 RPL24P83731 157 aaKnown RBP9.4□□□□□ -0.9
TRIM65-203ENST00000540812 LCE2AQ5TA79 106 aaPredicted RBP9.4□□□□□ -0.9
TRIM65-203ENST00000540812 A0A0U1RRA0 63 aa9.39□□□□□ -0.91
TRIM65-203ENST00000540812 C20orf202A1L168 122 aa9.39□□□□□ -0.91
TRIM65-203ENST00000540812 S100A6P06703 90 aa9.39□□□□□ -0.91
TRIM65-203ENST00000540812 HIST3H2BBQ8N257 126 aa9.39□□□□□ -0.91
TRIM65-203ENST00000540812 IGKV2D-26A0A0A0MRZ7 120 aa9.38□□□□□ -0.91
TRIM65-203ENST00000540812 FAM19A1Q7Z5A9 133 aa9.38□□□□□ -0.91
TRIM65-203ENST00000540812 Q8NDZ9 215 aa9.38□□□□□ -0.91
TRIM65-203ENST00000540812 TMEM126AQ9H061 195 aa9.38□□□□□ -0.91
TRIM65-203ENST00000540812 S100A2P29034 98 aa9.37□□□□□ -0.91
TRIM65-203ENST00000540812 AKR1D1P51857 326 aa9.37□□□□□ -0.91
TRIM65-203ENST00000540812 MIR7-3HGQ8N6C7 128 aa9.37□□□□□ -0.91
TRIM65-203ENST00000540812 M0R378 163 aa9.36□□□□□ -0.91
TRIM65-203ENST00000540812 HIST1H2BLQ99880 126 aa9.36□□□□□ -0.91
TRIM65-203ENST00000540812 IGLV7-46A0A075B6I9 117 aa9.35□□□□□ -0.91
TRIM65-203ENST00000540812 TPRXLQ17RH7 258 aa9.35□□□□□ -0.91
TRIM65-203ENST00000540812 C3orf22Q8N5N4 141 aa9.35□□□□□ -0.91
TRIM65-203ENST00000540812 CDIP1Q9H305 208 aa9.35□□□□□ -0.91
TRIM65-203ENST00000540812 LOC107984156A0A0G2JMH3 177 aa9.32□□□□□ -0.92
TRIM65-203ENST00000540812 A0A0J9YXY3 114 aa9.32□□□□□ -0.92
TRIM65-203ENST00000540812 ARL17AQ8IVW1 177 aa9.32□□□□□ -0.92
TRIM65-203ENST00000540812 BOD1L2Q8IYS8 172 aa9.32□□□□□ -0.92
TRIM65-203ENST00000540812 SNRPEP62304 92 aaKnown RBP9.31□□□□□ -0.92
TRIM65-203ENST00000540812 C5orf52A6NGY3 159 aa9.3□□□□□ -0.92
TRIM65-203ENST00000540812 DAND5Q8N907 189 aa9.3□□□□□ -0.92
TRIM65-203ENST00000540812 HIGD2AQ9BW72 106 aa9.3□□□□□ -0.92
TRIM65-203ENST00000540812 CTAG1AP78358 180 aa9.29□□□□□ -0.92
TRIM65-203ENST00000540812 ATOH7Q8N100 152 aa9.29□□□□□ -0.92
TRIM65-203ENST00000540812 PPDPFQ9H3Y8 114 aa9.29□□□□□ -0.92
TRIM65-203ENST00000540812 ZNF815PA8K554 130 aa9.28□□□□□ -0.92
TRIM65-203ENST00000540812 TIMM17BO60830 172 aa9.28□□□□□ -0.92
TRIM65-203ENST00000540812 ADAMTSL4-AS1Q5T5F5 129 aa9.28□□□□□ -0.92
TRIM65-203ENST00000540812 MIEN1Q9BRT3 115 aa9.28□□□□□ -0.92
TRIM65-203ENST00000540812 ANKRD39Q53RE8 183 aa9.27□□□□□ -0.93
TRIM65-203ENST00000540812 SPRR4Q96PI1 79 aa9.27□□□□□ -0.93
TRIM65-203ENST00000540812 LITAFQ99732 161 aa9.26□□□□□ -0.93
TRIM65-203ENST00000540812 TTTY13Q9BZ97 58 aa9.26□□□□□ -0.93
TRIM65-203ENST00000540812 NDUFC2O95298 119 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 171 ms