RNA–Protein interactions for RNA: ENST00000540590.1

LMO3-223, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 565 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-223ENST00000540590 LOC107984156A0A0G2JMH3 177 aa8.06□□□□□ -1.12
LMO3-223ENST00000540590 DDTP30046 118 aa8.06□□□□□ -1.12
LMO3-223ENST00000540590 FUSP35637 526 aaKnown RBP eCLIP8.06□□□□□ -1.12
LMO3-223ENST00000540590 ARL17AQ8IVW1 177 aa8.06□□□□□ -1.12
LMO3-223ENST00000540590 MIR7-3HGQ8N6C7 128 aa8.06□□□□□ -1.12
LMO3-223ENST00000540590 HECTD4Q9Y4D8 3996 aa8.05□□□□□ -1.12
LMO3-223ENST00000540590 IGLV5-52A0A0A0MRZ9 124 aa8.04□□□□□ -1.12
LMO3-223ENST00000540590 KRTAP10-2P60368 255 aa8.04□□□□□ -1.12
LMO3-223ENST00000540590 NPC2P61916 151 aa8.04□□□□□ -1.12
LMO3-223ENST00000540590 SRSF9Q13242 221 aaKnown RBP eCLIP8.04□□□□□ -1.12
LMO3-223ENST00000540590 LINC01620Q4KN68 170 aa8.04□□□□□ -1.12
LMO3-223ENST00000540590 Q6ZRP5 223 aa8.04□□□□□ -1.12
LMO3-223ENST00000540590 HIST1H4GQ99525 98 aa8.04□□□□□ -1.12
LMO3-223ENST00000540590 FAT2Q9NYQ8 4349 aa8.03□□□□□ -1.12
LMO3-223ENST00000540590 PCP4L1A6NKN8 68 aa8.03□□□□□ -1.12
LMO3-223ENST00000540590 C16orf90A8MZG2 172 aa8.03□□□□□ -1.12
LMO3-223ENST00000540590 EIF4EBP3O60516 100 aaPredicted RBP8.03□□□□□ -1.12
LMO3-223ENST00000540590 CTAG1AP78358 180 aa8.03□□□□□ -1.12
LMO3-223ENST00000540590 RPL18AQ02543 176 aaKnown RBP8.03□□□□□ -1.12
LMO3-223ENST00000540590 HSD52Q0P140 79 aa8.03□□□□□ -1.12
LMO3-223ENST00000540590 SOSTDC1Q6X4U4 206 aa8.03□□□□□ -1.12
LMO3-223ENST00000540590 LINC00308Q8TCZ7 52 aa8.03□□□□□ -1.12
LMO3-223ENST00000540590 SND1-IT1Q9HBX3 110 aa8.03□□□□□ -1.12
LMO3-223ENST00000540590 RYR2Q92736 4967 aa8.02□□□□□ -1.12
LMO3-223ENST00000540590 GAGE2EQ4V326 116 aa8.02□□□□□ -1.13
LMO3-223ENST00000540590 MUSTN1Q8IVN3 82 aa8.02□□□□□ -1.13
LMO3-223ENST00000540590 XAGE1AQ9HD64 81 aa8.02□□□□□ -1.13
LMO3-223ENST00000540590 GAGE2DQ9UEU5 116 aa8.02□□□□□ -1.13
LMO3-223ENST00000540590 A0A096LNI7 61 aa8.01□□□□□ -1.13
LMO3-223ENST00000540590 TMEM238LA0A1B0GVL6 79 aa8.01□□□□□ -1.13
LMO3-223ENST00000540590 NDUFC2O95298 119 aa8.01□□□□□ -1.13
LMO3-223ENST00000540590 RPL24P83731 157 aaKnown RBP8.01□□□□□ -1.13
LMO3-223ENST00000540590 GAGE2BQ13066 116 aa8.01□□□□□ -1.13
LMO3-223ENST00000540590 SDIM1Q6ZPB5 146 aa8.01□□□□□ -1.13
LMO3-223ENST00000540590 PLA2G2DQ9UNK4 145 aa8.01□□□□□ -1.13
LMO3-223ENST00000540590 A0A1B0GVY2 172 aa8□□□□□ -1.13
LMO3-223ENST00000540590 M0R143 59 aa8□□□□□ -1.13
LMO3-223ENST00000540590 CEND1Q8N111 149 aa8□□□□□ -1.13
LMO3-223ENST00000540590 C9orf129Q5T035 196 aaKnown RBP7.99□□□□□ -1.13
LMO3-223ENST00000540590 IGKV2-24A0A0C4DH68 120 aa7.98□□□□□ -1.13
LMO3-223ENST00000540590 CHTF8P0CG12 524 aa7.98□□□□□ -1.13
LMO3-223ENST00000540590 FXYD2P54710 66 aa7.98□□□□□ -1.13
LMO3-223ENST00000540590 HINT1P49773 126 aaPredicted RBP7.97□□□□□ -1.13
LMO3-223ENST00000540590 Q8NDZ9 215 aa7.97□□□□□ -1.13
LMO3-223ENST00000540590 CBY1Q9Y3M2 126 aa7.97□□□□□ -1.13
LMO3-223ENST00000540590 PKD1P98161 4303 aa7.97□□□□□ -1.13
LMO3-223ENST00000540590 IGLV5-37A0A075B6J1 123 aa7.96□□□□□ -1.14
LMO3-223ENST00000540590 TRBV10-2A0A0K0K1G8 114 aa7.96□□□□□ -1.14
LMO3-223ENST00000540590 A4D1N5 150 aa7.96□□□□□ -1.14
LMO3-223ENST00000540590 GHRHP01286 108 aa7.96□□□□□ -1.14
LMO3-223ENST00000540590 BVES-AS1Q5T3Y7 98 aa7.96□□□□□ -1.14
LMO3-223ENST00000540590 DNAH11Q96DT5 4516 aa7.96□□□□□ -1.14
LMO3-223ENST00000540590 PANO1I0J062 215 aa7.95□□□□□ -1.14
LMO3-223ENST00000540590 FAM168BA1KXE4 195 aa7.94□□□□□ -1.14
LMO3-223ENST00000540590 EPM2AB3EWF7 344 aa7.94□□□□□ -1.14
LMO3-223ENST00000540590 VPREB1P12018 145 aa7.94□□□□□ -1.14
LMO3-223ENST00000540590 SERTAD4-AS1Q5TG53 156 aa7.94□□□□□ -1.14
LMO3-223ENST00000540590 SPACA4Q8TDM5 124 aa7.94□□□□□ -1.14
LMO3-223ENST00000540590 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.94□□□□□ -1.14
LMO3-223ENST00000540590 KRTAP10-1P60331 282 aa7.93□□□□□ -1.14
LMO3-223ENST00000540590 PRR3P79522 188 aaKnown RBP7.93□□□□□ -1.14
LMO3-223ENST00000540590 Q6ZSA8 131 aa7.93□□□□□ -1.14
LMO3-223ENST00000540590 KRTAP7-1Q8IUC3 87 aa7.93□□□□□ -1.14
LMO3-223ENST00000540590 KRTAP4-9Q9BYQ8 210 aa7.93□□□□□ -1.14
LMO3-223ENST00000540590 IGKV2-28A0A075B6P5 120 aa7.92□□□□□ -1.14
LMO3-223ENST00000540590 TRAV13-2A0A0B4J235 113 aa7.92□□□□□ -1.14
LMO3-223ENST00000540590 A0A0B4J2C4 111 aa7.92□□□□□ -1.14
LMO3-223ENST00000540590 A0A1W2PNN7 141 aa7.92□□□□□ -1.14
LMO3-223ENST00000540590 A6NDN8 102 aa7.92□□□□□ -1.14
LMO3-223ENST00000540590 IGKV2D-28P01615 120 aa7.92□□□□□ -1.14
LMO3-223ENST00000540590 BATFQ16520 125 aa7.92□□□□□ -1.14
LMO3-223ENST00000540590 FAM19A5Q7Z5A7 132 aaPredicted RBP7.92□□□□□ -1.14
LMO3-223ENST00000540590 NCR3O14931 201 aa7.91□□□□□ -1.14
LMO3-223ENST00000540590 CFC1BP0CG36 223 aa7.91□□□□□ -1.14
LMO3-223ENST00000540590 CFC1P0CG37 223 aa7.91□□□□□ -1.14
LMO3-223ENST00000540590 LBHQ53QV2 105 aaPredicted RBP7.91□□□□□ -1.14
LMO3-223ENST00000540590 NKAPP1Q8N9T2 125 aa7.91□□□□□ -1.14
LMO3-223ENST00000540590 SNHG12Q9BXW3 62 aa7.91□□□□□ -1.14
LMO3-223ENST00000540590 NHP2Q9NX24 153 aaKnown RBP7.91□□□□□ -1.14
LMO3-223ENST00000540590 A0A1B0GWB2 263 aa7.9□□□□□ -1.14
LMO3-223ENST00000540590 M0R378 163 aa7.9□□□□□ -1.14
LMO3-223ENST00000540590 LINC00337Q8N6G1 96 aa7.9□□□□□ -1.14
LMO3-223ENST00000540590 TMEM126AQ9H061 195 aa7.9□□□□□ -1.14
LMO3-223ENST00000540590 PLAC8Q9NZF1 115 aa7.9□□□□□ -1.14
LMO3-223ENST00000540590 FAM30AQ9NZY2 134 aa7.9□□□□□ -1.14
LMO3-223ENST00000540590 DNAH5Q8TE73 4624 aa7.9□□□□□ -1.15
LMO3-223ENST00000540590 A0A087WYN8 130 aa7.89□□□□□ -1.15
LMO3-223ENST00000540590 K7ERJ3 54 aa7.89□□□□□ -1.15
LMO3-223ENST00000540590 DPH3Q96FX2 82 aa7.89□□□□□ -1.15
LMO3-223ENST00000540590 C22orf24Q9Y442 160 aa7.88□□□□□ -1.15
LMO3-223ENST00000540590 PKHD1P08F94 4074 aa7.88□□□□□ -1.15
LMO3-223ENST00000540590 RYR3Q15413 4870 aa7.87□□□□□ -1.15
LMO3-223ENST00000540590 M0QXV9 152 aa7.87□□□□□ -1.15
LMO3-223ENST00000540590 MRPL55Q7Z7F7 128 aaKnown RBP7.87□□□□□ -1.15
LMO3-223ENST00000540590 C7orf33Q8WU49 177 aa7.87□□□□□ -1.15
LMO3-223ENST00000540590 RAB37Q96AX2 223 aa7.87□□□□□ -1.15
LMO3-223ENST00000540590 GAGE10A6NGK3 116 aa7.86□□□□□ -1.15
LMO3-223ENST00000540590 IGLV6-57P01721 117 aa7.86□□□□□ -1.15
LMO3-223ENST00000540590 RPL13AP40429 203 aaKnown RBP7.86□□□□□ -1.15
LMO3-223ENST00000540590 S100A7L2Q5SY68 101 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms