RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 LAMTOR3Q9UHA4 124 aa9.59□□□□□ -0.87
INO80E-203ENST00000540562 CSMD3Q7Z407 3707 aa9.59□□□□□ -0.87
INO80E-203ENST00000540562 C9orf66Q5T8R8 295 aa9.59□□□□□ -0.87
INO80E-203ENST00000540562 ANK2Q01484 3957 aa9.59□□□□□ -0.87
INO80E-203ENST00000540562 M0R2N4 97 aa9.58□□□□□ -0.88
INO80E-203ENST00000540562 WFDC10BQ8IUB3 73 aa9.58□□□□□ -0.88
INO80E-203ENST00000540562 Q8N814 137 aa9.58□□□□□ -0.88
INO80E-203ENST00000540562 A0A1B0GX51 115 aa9.57□□□□□ -0.88
INO80E-203ENST00000540562 CYSTM1Q9H1C7 97 aa9.57□□□□□ -0.88
INO80E-203ENST00000540562 MGAM2Q2M2H8 2515 aa9.57□□□□□ -0.88
INO80E-203ENST00000540562 PRB2P02812 416 aaPredicted RBP9.57□□□□□ -0.88
INO80E-203ENST00000540562 hADV29S1A0JD25 119 aa9.57□□□□□ -0.88
INO80E-203ENST00000540562 LINC00612Q8N6U2 182 aa9.57□□□□□ -0.88
INO80E-203ENST00000540562 Q8NAQ8 132 aa9.57□□□□□ -0.88
INO80E-203ENST00000540562 TMEM126AQ9H061 195 aa9.57□□□□□ -0.88
INO80E-203ENST00000540562 TRAV23DV6A0A075B6W5 121 aa9.56□□□□□ -0.88
INO80E-203ENST00000540562 APOC4P55056 127 aa9.56□□□□□ -0.88
INO80E-203ENST00000540562 SPART-AS1P0CW21 52 aa9.56□□□□□ -0.88
INO80E-203ENST00000540562 FAM19A1Q7Z5A9 133 aa9.56□□□□□ -0.88
INO80E-203ENST00000540562 LYRM9A8MSI8 78 aa9.55□□□□□ -0.88
INO80E-203ENST00000540562 ENHOQ6UWT2 76 aa9.54□□□□□ -0.88
INO80E-203ENST00000540562 SCXQ7RTU7 201 aa9.54□□□□□ -0.88
INO80E-203ENST00000540562 Q6ZQY7 126 aa9.54□□□□□ -0.88
INO80E-203ENST00000540562 TRBV10-3A0A0K0K1G6 114 aa9.54□□□□□ -0.88
INO80E-203ENST00000540562 LOC107984640A0A0U1RRK4 108 aa9.53□□□□□ -0.88
INO80E-203ENST00000540562 SMIM9A6NGZ8 99 aa9.53□□□□□ -0.88
INO80E-203ENST00000540562 Q6ZTC4 211 aa9.52□□□□□ -0.88
INO80E-203ENST00000540562 HAMPP81172 84 aa9.52□□□□□ -0.89
INO80E-203ENST00000540562 LINC01561Q8N1V8 128 aa9.51□□□□□ -0.89
INO80E-203ENST00000540562 C6orf48Q9UBA6 75 aa9.51□□□□□ -0.89
INO80E-203ENST00000540562 C3orf22Q8N5N4 141 aa9.5□□□□□ -0.89
INO80E-203ENST00000540562 CAMK2N2Q96S95 79 aa9.5□□□□□ -0.89
INO80E-203ENST00000540562 ZNF561-AS1K7EIQ3 104 aa9.5□□□□□ -0.89
INO80E-203ENST00000540562 LYPD5Q6UWN5 251 aa9.5□□□□□ -0.89
INO80E-203ENST00000540562 KPRPQ5T749 579 aaPredicted RBP9.49□□□□□ -0.89
INO80E-203ENST00000540562 USP17L23D6RBM5 183 aa9.48□□□□□ -0.89
INO80E-203ENST00000540562 LELP1Q5T871 98 aa9.48□□□□□ -0.89
INO80E-203ENST00000540562 CCKP06307 115 aa9.48□□□□□ -0.89
INO80E-203ENST00000540562 IMUPQ9GZP8 106 aa9.48□□□□□ -0.89
INO80E-203ENST00000540562 IGKV2D-24A0A075B6R9 120 aa9.47□□□□□ -0.89
INO80E-203ENST00000540562 TMEM256-PLSCR3K7ERE1 68 aa9.47□□□□□ -0.89
INO80E-203ENST00000540562 MIFP14174 115 aa9.47□□□□□ -0.89
INO80E-203ENST00000540562 LINC00575Q6W349 94 aa9.47□□□□□ -0.89
INO80E-203ENST00000540562 DEFB105AQ8NG35 78 aa9.47□□□□□ -0.89
INO80E-203ENST00000540562 TENM2Q9NT68 2774 aa9.46□□□□□ -0.89
INO80E-203ENST00000540562 PPDPFQ9H3Y8 114 aa9.46□□□□□ -0.9
INO80E-203ENST00000540562 UQCRQO14949 82 aa9.45□□□□□ -0.9
INO80E-203ENST00000540562 RBM3P98179 157 aaKnown RBP9.45□□□□□ -0.9
INO80E-203ENST00000540562 Q6ZRU5 148 aa9.45□□□□□ -0.9
INO80E-203ENST00000540562 COX7CP15954 63 aa9.45□□□□□ -0.9
INO80E-203ENST00000540562 MRAPQ8TCY5 172 aa9.45□□□□□ -0.9
INO80E-203ENST00000540562 OBSCN-AS1Q96MR7 158 aa9.45□□□□□ -0.9
INO80E-203ENST00000540562 KRTAP10-11P60412 298 aa9.44□□□□□ -0.9
INO80E-203ENST00000540562 COX17Q14061 63 aa9.44□□□□□ -0.9
INO80E-203ENST00000540562 GHRHP01286 108 aa9.43□□□□□ -0.9
INO80E-203ENST00000540562 Q6JHZ5 121 aa9.43□□□□□ -0.9
INO80E-203ENST00000540562 A0A0J9YWU9 116 aa9.42□□□□□ -0.9
INO80E-203ENST00000540562 NDUFC2O95298 119 aa9.42□□□□□ -0.9
INO80E-203ENST00000540562 C2orf48Q96LS8 159 aa9.42□□□□□ -0.9
INO80E-203ENST00000540562 UBL5Q9BZL1 73 aa9.42□□□□□ -0.9
INO80E-203ENST00000540562 STAB2Q8WWQ8 2551 aa9.42□□□□□ -0.9
INO80E-203ENST00000540562 JMJD7-PLA2G4BH0Y9G9 81 aa9.42□□□□□ -0.9
INO80E-203ENST00000540562 ATOX1O00244 68 aa9.42□□□□□ -0.9
INO80E-203ENST00000540562 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.42□□□□□ -0.9
INO80E-203ENST00000540562 ESRGQ1W209 222 aa9.42□□□□□ -0.9
INO80E-203ENST00000540562 UPK3BQ9BT76 320 aa9.42□□□□□ -0.9
INO80E-203ENST00000540562 Q8N9L7 120 aa9.41□□□□□ -0.9
INO80E-203ENST00000540562 DSCR8Q96T75 97 aa9.41□□□□□ -0.9
INO80E-203ENST00000540562 DIRC1Q969H9 104 aa9.41□□□□□ -0.9
INO80E-203ENST00000540562 ZNF73O43830 326 aaPredicted RBP9.4□□□□□ -0.9
INO80E-203ENST00000540562 RPL37AP8A6NKH3 93 aa9.4□□□□□ -0.91
INO80E-203ENST00000540562 PRR34Q9NV39 138 aa9.39□□□□□ -0.91
INO80E-203ENST00000540562 C20orf197Q8N268 126 aa9.38□□□□□ -0.91
INO80E-203ENST00000540562 IGLV6-57P01721 117 aa9.37□□□□□ -0.91
INO80E-203ENST00000540562 C1orf43Q9BWL3 253 aa9.37□□□□□ -0.91
INO80E-203ENST00000540562 Q6ZQT0 140 aa9.37□□□□□ -0.91
INO80E-203ENST00000540562 Q6ZRP5 223 aa9.37□□□□□ -0.91
INO80E-203ENST00000540562 SRRM2Q9UQ35 2752 aaKnown RBP9.37□□□□□ -0.91
INO80E-203ENST00000540562 C3orf84H3BNL1 204 aa9.37□□□□□ -0.91
INO80E-203ENST00000540562 COX7BP24311 80 aa9.36□□□□□ -0.91
INO80E-203ENST00000540562 DEFB131BA0A096LNP1 70 aa9.36□□□□□ -0.91
INO80E-203ENST00000540562 CASC10Q5T4H9 136 aa9.36□□□□□ -0.91
INO80E-203ENST00000540562 SERP2Q8N6R1 65 aa9.35□□□□□ -0.91
INO80E-203ENST00000540562 C15orf56Q8N910 161 aa9.35□□□□□ -0.91
INO80E-203ENST00000540562 LINC00167Q96N53 147 aa9.35□□□□□ -0.91
INO80E-203ENST00000540562 FAM168BA1KXE4 195 aa9.35□□□□□ -0.91
INO80E-203ENST00000540562 SNURFQ9Y675 71 aa9.35□□□□□ -0.91
INO80E-203ENST00000540562 Q6ZVQ6 151 aa9.35□□□□□ -0.91
INO80E-203ENST00000540562 TRAV10A0A0B4J240 114 aa9.34□□□□□ -0.91
INO80E-203ENST00000540562 LYSTQ99698 3801 aa9.34□□□□□ -0.91
INO80E-203ENST00000540562 LINC01547P58512 204 aaPredicted RBP9.33□□□□□ -0.92
INO80E-203ENST00000540562 VPREB1P12018 145 aa9.33□□□□□ -0.92
INO80E-203ENST00000540562 SERTAD4-AS1Q5TG53 156 aa9.32□□□□□ -0.92
INO80E-203ENST00000540562 MUC7Q8TAX7 377 aa9.32□□□□□ -0.92
INO80E-203ENST00000540562 C11orf45Q8TAV5 145 aa9.32□□□□□ -0.92
INO80E-203ENST00000540562 A0A0G2JQZ4 141 aa9.3□□□□□ -0.92
INO80E-203ENST00000540562 A0A1W2PNN7 141 aa9.3□□□□□ -0.92
INO80E-203ENST00000540562 NKAPP1Q8N9T2 125 aa9.3□□□□□ -0.92
INO80E-203ENST00000540562 CRYGAP11844 174 aa9.29□□□□□ -0.92
INO80E-203ENST00000540562 NDUFC2-KCTD14E9PQ53 114 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 337 ms