RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 TMEM170BQ5T4T1 132 aa7.67□□□□□ -1.18
SEMA4D-223ENST00000540475 TMEM126AQ9H061 195 aa7.67□□□□□ -1.18
SEMA4D-223ENST00000540475 CHTOPQ9Y3Y2 248 aaKnown RBP7.67□□□□□ -1.18
SEMA4D-223ENST00000540475 M0R378 163 aa7.66□□□□□ -1.18
SEMA4D-223ENST00000540475 CTAG1AP78358 180 aa7.66□□□□□ -1.18
SEMA4D-223ENST00000540475 ANAPC11Q9NYG5 84 aa7.66□□□□□ -1.18
SEMA4D-223ENST00000540475 IFI27L1Q96BM0 104 aa7.65□□□□□ -1.18
SEMA4D-223ENST00000540475 TMEM238C9JI98 176 aa7.64□□□□□ -1.19
SEMA4D-223ENST00000540475 TSPAN13O95857 204 aa7.64□□□□□ -1.19
SEMA4D-223ENST00000540475 PRLHP81277 87 aa7.63□□□□□ -1.19
SEMA4D-223ENST00000540475 PLEKHB2Q96CS7 222 aa7.63□□□□□ -1.19
SEMA4D-223ENST00000540475 FAM19A1Q7Z5A9 133 aa7.62□□□□□ -1.19
SEMA4D-223ENST00000540475 LINC00158P58513 81 aa7.61□□□□□ -1.19
SEMA4D-223ENST00000540475 LINC00304Q8N9R0 145 aa7.6□□□□□ -1.19
SEMA4D-223ENST00000540475 IGKV2D-26A0A0A0MRZ7 120 aa7.59□□□□□ -1.19
SEMA4D-223ENST00000540475 SMIM13P0DJ93 91 aa7.59□□□□□ -1.19
SEMA4D-223ENST00000540475 SPRR1AP35321 89 aa7.59□□□□□ -1.19
SEMA4D-223ENST00000540475 HERV-K104P63124 156 aa7.59□□□□□ -1.19
SEMA4D-223ENST00000540475 CBLN2Q8IUK8 224 aa7.59□□□□□ -1.19
SEMA4D-223ENST00000540475 LOC107984156A0A0G2JMH3 177 aa7.58□□□□□ -1.2
SEMA4D-223ENST00000540475 LINC00587B1AMM8 73 aa7.58□□□□□ -1.2
SEMA4D-223ENST00000540475 KRTAP4-16G5E9R7 235 aaPredicted RBP7.58□□□□□ -1.2
SEMA4D-223ENST00000540475 HSBP1O75506 76 aa7.58□□□□□ -1.2
SEMA4D-223ENST00000540475 ARL17AQ8IVW1 177 aa7.58□□□□□ -1.2
SEMA4D-223ENST00000540475 FAM19A2Q8N3H0 131 aa7.58□□□□□ -1.2
SEMA4D-223ENST00000540475 KCNQ1DNQ9H478 68 aa7.58□□□□□ -1.2
SEMA4D-223ENST00000540475 LINC00310P59036 64 aa7.57□□□□□ -1.2
SEMA4D-223ENST00000540475 LINC00337Q8N6G1 96 aa7.57□□□□□ -1.2
SEMA4D-223ENST00000540475 A0A0U1RRA0 63 aa7.56□□□□□ -1.2
SEMA4D-223ENST00000540475 PRYO14603 147 aa7.56□□□□□ -1.2
SEMA4D-223ENST00000540475 MIR7-3HGQ8N6C7 128 aa7.56□□□□□ -1.2
SEMA4D-223ENST00000540475 SPRR4Q96PI1 79 aa7.56□□□□□ -1.2
SEMA4D-223ENST00000540475 MYMXA0A1B0GTQ4 84 aa7.55□□□□□ -1.2
SEMA4D-223ENST00000540475 TRGC2P03986 189 aa7.55□□□□□ -1.2
SEMA4D-223ENST00000540475 BOD1L2Q8IYS8 172 aa7.55□□□□□ -1.2
SEMA4D-223ENST00000540475 NDUFA12Q9UI09 145 aa7.55□□□□□ -1.2
SEMA4D-223ENST00000540475 LEPROTL1O95214 131 aa7.54□□□□□ -1.2
SEMA4D-223ENST00000540475 TPRXLQ17RH7 258 aa7.54□□□□□ -1.2
SEMA4D-223ENST00000540475 MEIG1Q5JSS6 88 aa7.54□□□□□ -1.2
SEMA4D-223ENST00000540475 SPAG11AQ6PDA7 123 aa7.54□□□□□ -1.2
SEMA4D-223ENST00000540475 C3orf22Q8N5N4 141 aa7.54□□□□□ -1.2
SEMA4D-223ENST00000540475 HIGD2AQ9BW72 106 aa7.54□□□□□ -1.2
SEMA4D-223ENST00000540475 FAT4Q6V0I7 4981 aa7.54□□□□□ -1.2
SEMA4D-223ENST00000540475 LEPROTO15243 131 aa7.53□□□□□ -1.2
SEMA4D-223ENST00000540475 ATP6V1G1O75348 118 aa7.53□□□□□ -1.2
SEMA4D-223ENST00000540475 TSPEAR-AS2P59090 65 aa7.53□□□□□ -1.2
SEMA4D-223ENST00000540475 MAP1LC3CQ9BXW4 147 aa7.53□□□□□ -1.2
SEMA4D-223ENST00000540475 SERF1AO75920 110 aa7.52□□□□□ -1.21
SEMA4D-223ENST00000540475 PLNP26678 52 aa7.52□□□□□ -1.21
SEMA4D-223ENST00000540475 RETNLBQ9BQ08 111 aa7.52□□□□□ -1.21
SEMA4D-223ENST00000540475 ZNF706Q9Y5V0 76 aaPredicted RBP7.52□□□□□ -1.21
SEMA4D-223ENST00000540475 TRBV10-2A0A0K0K1G8 114 aa7.51□□□□□ -1.21
SEMA4D-223ENST00000540475 LINC00483Q53H64 154 aa7.51□□□□□ -1.21
SEMA4D-223ENST00000540475 TRBV10-3A0A0K0K1G6 114 aa7.5□□□□□ -1.21
SEMA4D-223ENST00000540475 COLCA2A8K830 154 aa7.5□□□□□ -1.21
SEMA4D-223ENST00000540475 NCR3O14931 201 aa7.5□□□□□ -1.21
SEMA4D-223ENST00000540475 SMCR5Q8TEV8 140 aa7.5□□□□□ -1.21
SEMA4D-223ENST00000540475 HSPB8Q9UJY1 196 aa7.5□□□□□ -1.21
SEMA4D-223ENST00000540475 IGLV7-46A0A075B6I9 117 aa7.49□□□□□ -1.21
SEMA4D-223ENST00000540475 B5MCH6 92 aa7.49□□□□□ -1.21
SEMA4D-223ENST00000540475 J3QQQ9 107 aa7.49□□□□□ -1.21
SEMA4D-223ENST00000540475 NMUP48645 174 aa7.49□□□□□ -1.21
SEMA4D-223ENST00000540475 ETDCA0A1B0GVM5 59 aa7.48□□□□□ -1.21
SEMA4D-223ENST00000540475 H0Y8G0 127 aa7.48□□□□□ -1.21
SEMA4D-223ENST00000540475 DPM2O94777 84 aa7.48□□□□□ -1.21
SEMA4D-223ENST00000540475 NDUFC2O95298 119 aa7.48□□□□□ -1.21
SEMA4D-223ENST00000540475 A0A0U1RQV1 116 aa7.47□□□□□ -1.21
SEMA4D-223ENST00000540475 IGKCP01834 107 aa7.47□□□□□ -1.21
SEMA4D-223ENST00000540475 IGLV6-57P01721 117 aa7.46□□□□□ -1.22
SEMA4D-223ENST00000540475 HERVK_113P61574 105 aa7.46□□□□□ -1.22
SEMA4D-223ENST00000540475 S100A12P80511 92 aa7.46□□□□□ -1.22
SEMA4D-223ENST00000540475 FP248Q71RG6 208 aaPredicted RBP7.46□□□□□ -1.22
SEMA4D-223ENST00000540475 DAND5Q8N907 189 aa7.46□□□□□ -1.22
SEMA4D-223ENST00000540475 FABP4P15090 132 aa7.45□□□□□ -1.22
SEMA4D-223ENST00000540475 DDTP30046 118 aa7.45□□□□□ -1.22
SEMA4D-223ENST00000540475 CDIP1Q9H305 208 aa7.45□□□□□ -1.22
SEMA4D-223ENST00000540475 PPDPFQ9H3Y8 114 aa7.45□□□□□ -1.22
SEMA4D-223ENST00000540475 SPANXB1Q9NS25 103 aaPredicted RBP7.45□□□□□ -1.22
SEMA4D-223ENST00000540475 ERC2-IT1O76042 136 aa7.44□□□□□ -1.22
SEMA4D-223ENST00000540475 SPINK1P00995 79 aa7.44□□□□□ -1.22
SEMA4D-223ENST00000540475 LCE2AQ5TA79 106 aaPredicted RBP7.44□□□□□ -1.22
SEMA4D-223ENST00000540475 Q6ZRX8 168 aa7.44□□□□□ -1.22
SEMA4D-223ENST00000540475 SLC7A5P1Q8MH63 180 aa7.44□□□□□ -1.22
SEMA4D-223ENST00000540475 Q8NBF4 154 aa7.44□□□□□ -1.22
SEMA4D-223ENST00000540475 PMCHL2Q9BQD1 86 aa7.44□□□□□ -1.22
SEMA4D-223ENST00000540475 Q9BRP9 147 aa7.44□□□□□ -1.22
SEMA4D-223ENST00000540475 E9PLD3 99 aa7.43□□□□□ -1.22
SEMA4D-223ENST00000540475 LGALS3P17931 250 aaKnown RBP7.43□□□□□ -1.22
SEMA4D-223ENST00000540475 RPS29P62273 56 aaKnown RBP7.43□□□□□ -1.22
SEMA4D-223ENST00000540475 C4orf48Q5BLP8 95 aa7.43□□□□□ -1.22
SEMA4D-223ENST00000540475 A0A0J9YXY3 114 aa7.42□□□□□ -1.22
SEMA4D-223ENST00000540475 EIF4EBP3O60516 100 aaPredicted RBP7.42□□□□□ -1.22
SEMA4D-223ENST00000540475 ADAMTSL4-AS1Q5T5F5 129 aa7.42□□□□□ -1.22
SEMA4D-223ENST00000540475 SOSTDC1Q6X4U4 206 aa7.42□□□□□ -1.22
SEMA4D-223ENST00000540475 SSBP3-AS1Q7Z2R9 100 aa7.42□□□□□ -1.22
SEMA4D-223ENST00000540475 MIEN1Q9BRT3 115 aa7.41□□□□□ -1.22
SEMA4D-223ENST00000540475 C5orf52A6NGY3 159 aa7.4□□□□□ -1.22
SEMA4D-223ENST00000540475 KRTAP13-3Q3SY46 172 aa7.4□□□□□ -1.22
SEMA4D-223ENST00000540475 GAGE2AQ6NT46 116 aa7.4□□□□□ -1.22
SEMA4D-223ENST00000540475 SYS1-DBNDD2H3BUS1 97 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms