RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 CFHR3Q02985 330 aa6.14□□□□□ -1.43
DDB1-217ENST00000540166 UBE2DNLQ8IWF7 75 aa6.14□□□□□ -1.43
DDB1-217ENST00000540166 Q9UF83 564 aa6.14□□□□□ -1.43
DDB1-217ENST00000540166 Q6ZSN1 163 aa6.14□□□□□ -1.43
DDB1-217ENST00000540166 FUSP35637 526 aaKnown RBP eCLIP6.13□□□□□ -1.43
DDB1-217ENST00000540166 MUC7Q8TAX7 377 aa6.13□□□□□ -1.43
DDB1-217ENST00000540166 H7BZZ5 65 aa6.13□□□□□ -1.43
DDB1-217ENST00000540166 K7EQD1 137 aa6.13□□□□□ -1.43
DDB1-217ENST00000540166 LINC00474Q9P2X8 69 aa6.12□□□□□ -1.43
DDB1-217ENST00000540166 SS18Q15532 418 aa6.12□□□□□ -1.43
DDB1-217ENST00000540166 Q8N3U1 123 aa6.12□□□□□ -1.43
DDB1-217ENST00000540166 CDC42SE2Q9NRR3 84 aa6.12□□□□□ -1.43
DDB1-217ENST00000540166 C3orf84H3BNL1 204 aa6.11□□□□□ -1.43
DDB1-217ENST00000540166 PDE6GP18545 87 aa6.11□□□□□ -1.43
DDB1-217ENST00000540166 Q8N814 137 aa6.11□□□□□ -1.43
DDB1-217ENST00000540166 TRBV6-4A0A1B0GX49 114 aa6.11□□□□□ -1.43
DDB1-217ENST00000540166 BCE1O60756 84 aa6.11□□□□□ -1.43
DDB1-217ENST00000540166 DEFB135Q30KP9 77 aa6.11□□□□□ -1.43
DDB1-217ENST00000540166 Q6ZTI0 123 aa6.11□□□□□ -1.43
DDB1-217ENST00000540166 IGKV2-28A0A075B6P5 120 aa6.11□□□□□ -1.43
DDB1-217ENST00000540166 TRBV10-1A0A0K0K1A3 114 aa6.11□□□□□ -1.43
DDB1-217ENST00000540166 IGKV2D-28P01615 120 aa6.11□□□□□ -1.43
DDB1-217ENST00000540166 LY6G6CO95867 125 aa6.1□□□□□ -1.43
DDB1-217ENST00000540166 C6orf99Q4VX62 202 aa6.1□□□□□ -1.43
DDB1-217ENST00000540166 LINC01547P58512 204 aaPredicted RBP6.1□□□□□ -1.43
DDB1-217ENST00000540166 KRTAP10-11P60412 298 aa6.1□□□□□ -1.43
DDB1-217ENST00000540166 NREPQ16612 68 aa6.1□□□□□ -1.43
DDB1-217ENST00000540166 DEFB114Q30KQ6 69 aa6.1□□□□□ -1.43
DDB1-217ENST00000540166 IGLV1-51P01701 117 aa6.09□□□□□ -1.43
DDB1-217ENST00000540166 NTM-AS1Q6ZSK4 140 aa6.09□□□□□ -1.43
DDB1-217ENST00000540166 CSMD2Q7Z408 3487 aa6.09□□□□□ -1.43
DDB1-217ENST00000540166 KLKP1Q107X0 134 aa6.09□□□□□ -1.43
DDB1-217ENST00000540166 NOP10Q9NPE3 64 aaKnown RBP6.09□□□□□ -1.43
DDB1-217ENST00000540166 TMEM254Q8TBM7 123 aa6.09□□□□□ -1.43
DDB1-217ENST00000540166 MAP6D1Q9H9H5 199 aa6.09□□□□□ -1.43
DDB1-217ENST00000540166 TRAV10A0A0B4J240 114 aa6.08□□□□□ -1.44
DDB1-217ENST00000540166 ZNF561-AS1K7EIQ3 104 aa6.08□□□□□ -1.44
DDB1-217ENST00000540166 Q6ZVQ6 151 aa6.08□□□□□ -1.44
DDB1-217ENST00000540166 C22orf24Q9Y442 160 aa6.08□□□□□ -1.44
DDB1-217ENST00000540166 PMAIP1Q13794 54 aa6.08□□□□□ -1.44
DDB1-217ENST00000540166 CLPSL2Q6UWE3 100 aa6.08□□□□□ -1.44
DDB1-217ENST00000540166 FBN1P35555 2871 aaKnown RBP6.08□□□□□ -1.44
DDB1-217ENST00000540166 ESRGQ1W209 222 aa6.07□□□□□ -1.44
DDB1-217ENST00000540166 BPY2O14599 106 aa6.07□□□□□ -1.44
DDB1-217ENST00000540166 FAM104AQ969W3 186 aa6.07□□□□□ -1.44
DDB1-217ENST00000540166 PRR3P79522 188 aaKnown RBP6.07□□□□□ -1.44
DDB1-217ENST00000540166 EGFEM1PQ0D2K5 195 aa6.06□□□□□ -1.44
DDB1-217ENST00000540166 LRCOL1A6NCL2 159 aa6.06□□□□□ -1.44
DDB1-217ENST00000540166 MRPL55Q7Z7F7 128 aaKnown RBP6.06□□□□□ -1.44
DDB1-217ENST00000540166 C11orf72Q8NBR9 251 aa6.06□□□□□ -1.44
DDB1-217ENST00000540166 OBSCN-AS1Q96MR7 158 aa6.06□□□□□ -1.44
DDB1-217ENST00000540166 RETNQ9HD89 108 aa6.06□□□□□ -1.44
DDB1-217ENST00000540166 C11orf45Q8TAV5 145 aa6.06□□□□□ -1.44
DDB1-217ENST00000540166 H3BQ85 93 aa6.05□□□□□ -1.44
DDB1-217ENST00000540166 PRYO14603 147 aa6.05□□□□□ -1.44
DDB1-217ENST00000540166 DEFB130BP0DP73 79 aa6.05□□□□□ -1.44
DDB1-217ENST00000540166 DEFB130AP0DP74 79 aa6.05□□□□□ -1.44
DDB1-217ENST00000540166 Q6ZQY7 126 aa6.05□□□□□ -1.44
DDB1-217ENST00000540166 FP248Q71RG6 208 aaPredicted RBP6.05□□□□□ -1.44
DDB1-217ENST00000540166 FAM19A3Q7Z5A8 133 aa6.05□□□□□ -1.44
DDB1-217ENST00000540166 TM2D3Q9BRN9 247 aa6.05□□□□□ -1.44
DDB1-217ENST00000540166 KPRPQ5T749 579 aaPredicted RBP6.05□□□□□ -1.44
DDB1-217ENST00000540166 WFDC10AQ9H1F0 79 aa6.05□□□□□ -1.44
DDB1-217ENST00000540166 NUPR2A6NF83 97 aa6.04□□□□□ -1.44
DDB1-217ENST00000540166 CXCL6P80162 114 aa6.04□□□□□ -1.44
DDB1-217ENST00000540166 A0A087WZ39 114 aa6.03□□□□□ -1.44
DDB1-217ENST00000540166 DEFB4AO15263 64 aa6.03□□□□□ -1.44
DDB1-217ENST00000540166 LYPD5Q6UWN5 251 aa6.03□□□□□ -1.44
DDB1-217ENST00000540166 SVEP1Q4LDE5 3571 aa6.02□□□□□ -1.45
DDB1-217ENST00000540166 Q6ZQT0 140 aa6.02□□□□□ -1.45
DDB1-217ENST00000540166 A0A096LPF7 62 aa6.02□□□□□ -1.45
DDB1-217ENST00000540166 A0A0J9YWU9 116 aa6.01□□□□□ -1.45
DDB1-217ENST00000540166 LOC100131303A0A0U1RQF7 123 aa6.01□□□□□ -1.45
DDB1-217ENST00000540166 PSPHP1O15172 72 aa6.01□□□□□ -1.45
DDB1-217ENST00000540166 HIGD2BQ4VC39 106 aa6.01□□□□□ -1.45
DDB1-217ENST00000540166 IGLV10-54A0A075B6I4 117 aa6.01□□□□□ -1.45
DDB1-217ENST00000540166 PLAC8L1A1L4L8 177 aa6.01□□□□□ -1.45
DDB1-217ENST00000540166 DIRC1Q969H9 104 aa6.01□□□□□ -1.45
DDB1-217ENST00000540166 IGLV4-60A0A075B6I1 120 aa6□□□□□ -1.45
DDB1-217ENST00000540166 TENM1Q9UKZ4 2725 aa6□□□□□ -1.45
DDB1-217ENST00000540166 TRBV6-8A0A0A6YYG3 113 aa6□□□□□ -1.45
DDB1-217ENST00000540166 LINC00575Q6W349 94 aa6□□□□□ -1.45
DDB1-217ENST00000540166 LINC00959A0A1B0GUT2 108 aa6□□□□□ -1.45
DDB1-217ENST00000540166 A8MTW9 85 aa6□□□□□ -1.45
DDB1-217ENST00000540166 SPART-AS1P0CW21 52 aa6□□□□□ -1.45
DDB1-217ENST00000540166 LINC00269Q8N2A0 174 aa6□□□□□ -1.45
DDB1-217ENST00000540166 IGHV3OR16-9A0A0B4J2B5 98 aa5.99□□□□□ -1.45
DDB1-217ENST00000540166 ODF3L2Q3SX64 289 aa5.99□□□□□ -1.45
DDB1-217ENST00000540166 C1orf158Q8N1D5 194 aa5.99□□□□□ -1.45
DDB1-217ENST00000540166 SPTSSBQ8NFR3 76 aa5.99□□□□□ -1.45
DDB1-217ENST00000540166 ANGP03950 147 aaKnown RBP5.99□□□□□ -1.45
DDB1-217ENST00000540166 IGHV4-28A0A0C4DH34 117 aa5.99□□□□□ -1.45
DDB1-217ENST00000540166 TGP01266 2768 aa5.98□□□□□ -1.45
DDB1-217ENST00000540166 Q8IZM0 81 aa5.98□□□□□ -1.45
DDB1-217ENST00000540166 Q8N9L7 120 aa5.98□□□□□ -1.45
DDB1-217ENST00000540166 LOC110117498A0A087WWA1 95 aa5.98□□□□□ -1.45
DDB1-217ENST00000540166 PRR4Q16378 134 aa5.98□□□□□ -1.45
DDB1-217ENST00000540166 C16orf74Q96GX8 76 aa5.98□□□□□ -1.45
DDB1-217ENST00000540166 CELA1Q9UNI1 258 aa5.98□□□□□ -1.45
DDB1-217ENST00000540166 COX7BP24311 80 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms