RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 IGLC3P0DOY3 106 aa11.21□□□□□ -0.61
LPCAT3-210ENST00000540090 DAND5Q8N907 189 aa11.21□□□□□ -0.61
LPCAT3-210ENST00000540090 ZNF706Q9Y5V0 76 aaPredicted RBP11.21□□□□□ -0.61
LPCAT3-210ENST00000540090 SPINK1P00995 79 aa11.2□□□□□ -0.62
LPCAT3-210ENST00000540090 ZNF625Q96I27 306 aaPredicted RBP11.19□□□□□ -0.62
LPCAT3-210ENST00000540090 ZNF22P17026 224 aaPredicted RBP11.18□□□□□ -0.62
LPCAT3-210ENST00000540090 SFTA2Q6UW10 78 aa11.15□□□□□ -0.62
LPCAT3-210ENST00000540090 TRAV9-1A0A075B6T8 112 aa11.14□□□□□ -0.63
LPCAT3-210ENST00000540090 A0A1B0GVG6 124 aa11.14□□□□□ -0.63
LPCAT3-210ENST00000540090 FA2HQ7L5A8 372 aa11.14□□□□□ -0.63
LPCAT3-210ENST00000540090 NDUFA6P56556 154 aa11.13□□□□□ -0.63
LPCAT3-210ENST00000540090 SMCR5Q8TEV8 140 aa11.13□□□□□ -0.63
LPCAT3-210ENST00000540090 SMCO4Q9NRQ5 59 aa11.13□□□□□ -0.63
LPCAT3-210ENST00000540090 SPRR1AP35321 89 aa11.11□□□□□ -0.63
LPCAT3-210ENST00000540090 LINC00158P58513 81 aa11.11□□□□□ -0.63
LPCAT3-210ENST00000540090 LINC00483Q53H64 154 aa11.11□□□□□ -0.63
LPCAT3-210ENST00000540090 LCE2CQ5TA81 110 aa11.11□□□□□ -0.63
LPCAT3-210ENST00000540090 NDUFA12Q9UI09 145 aa11.11□□□□□ -0.63
LPCAT3-210ENST00000540090 PRYO14603 147 aa11.1□□□□□ -0.63
LPCAT3-210ENST00000540090 RPS29P62273 56 aaKnown RBP11.1□□□□□ -0.63
LPCAT3-210ENST00000540090 A0A096LNJ9 63 aa11.09□□□□□ -0.63
LPCAT3-210ENST00000540090 XP32Q5T750 250 aa11.09□□□□□ -0.63
LPCAT3-210ENST00000540090 Q8N377 158 aa11.09□□□□□ -0.63
LPCAT3-210ENST00000540090 KCNQ1DNQ9H478 68 aa11.09□□□□□ -0.63
LPCAT3-210ENST00000540090 C11orf86A6NJI1 115 aa11.08□□□□□ -0.64
LPCAT3-210ENST00000540090 KRTAP4-16G5E9R7 235 aaPredicted RBP11.08□□□□□ -0.64
LPCAT3-210ENST00000540090 FAM19A2Q8N3H0 131 aa11.07□□□□□ -0.64
LPCAT3-210ENST00000540090 A0A0U1RRA0 63 aa11.06□□□□□ -0.64
LPCAT3-210ENST00000540090 TMEM170BQ5T4T1 132 aa11.06□□□□□ -0.64
LPCAT3-210ENST00000540090 SSBP3-AS1Q7Z2R9 100 aa11.06□□□□□ -0.64
LPCAT3-210ENST00000540090 GAGE2AQ6NT46 116 aa11.05□□□□□ -0.64
LPCAT3-210ENST00000540090 ETDCA0A1B0GVM5 59 aa11.04□□□□□ -0.64
LPCAT3-210ENST00000540090 SLC25A20O43772 301 aa11.04□□□□□ -0.64
LPCAT3-210ENST00000540090 FABP9Q0Z7S8 132 aa11.04□□□□□ -0.64
LPCAT3-210ENST00000540090 BAGE3Q86Y29 109 aa11.04□□□□□ -0.64
LPCAT3-210ENST00000540090 BOD1L2Q8IYS8 172 aa11.04□□□□□ -0.64
LPCAT3-210ENST00000540090 MOBPQ13875 183 aa11.03□□□□□ -0.64
LPCAT3-210ENST00000540090 KRTAP19-2Q3LHN2 52 aa11.03□□□□□ -0.64
LPCAT3-210ENST00000540090 COX19Q49B96 90 aa11.03□□□□□ -0.64
LPCAT3-210ENST00000540090 S100PP25815 95 aa11.02□□□□□ -0.65
LPCAT3-210ENST00000540090 URB1-AS1Q96HZ7 61 aa11.02□□□□□ -0.65
LPCAT3-210ENST00000540090 IGLV9-49A0A0B4J1Y8 123 aa11.01□□□□□ -0.65
LPCAT3-210ENST00000540090 NCR3O14931 201 aa11.01□□□□□ -0.65
LPCAT3-210ENST00000540090 HBDP02042 147 aa11.01□□□□□ -0.65
LPCAT3-210ENST00000540090 LINC00614P0C842 121 aa11.01□□□□□ -0.65
LPCAT3-210ENST00000540090 SMIM13P0DJ93 91 aa11.01□□□□□ -0.65
LPCAT3-210ENST00000540090 TRBV10-3A0A0K0K1G6 114 aa10.99□□□□□ -0.65
LPCAT3-210ENST00000540090 ATP6V1G1O75348 118 aa10.99□□□□□ -0.65
LPCAT3-210ENST00000540090 ERC2-IT1O76042 136 aa10.99□□□□□ -0.65
LPCAT3-210ENST00000540090 B5MCH6 92 aa10.98□□□□□ -0.65
LPCAT3-210ENST00000540090 MT1HP80294 61 aa10.98□□□□□ -0.65
LPCAT3-210ENST00000540090 PMCHL1Q16048 86 aa10.98□□□□□ -0.65
LPCAT3-210ENST00000540090 MIR7-3HGQ8N6C7 128 aa10.98□□□□□ -0.65
LPCAT3-210ENST00000540090 TMEM223A0PJW6 202 aa10.97□□□□□ -0.65
LPCAT3-210ENST00000540090 TMEM218A2RU14 115 aa10.97□□□□□ -0.65
LPCAT3-210ENST00000540090 C18orf32Q8TCD1 76 aa10.96□□□□□ -0.65
LPCAT3-210ENST00000540090 SEC11CQ9BY50 192 aa10.96□□□□□ -0.65
LPCAT3-210ENST00000540090 CHTOPQ9Y3Y2 248 aaKnown RBP10.96□□□□□ -0.65
LPCAT3-210ENST00000540090 MEIG1Q5JSS6 88 aa10.95□□□□□ -0.66
LPCAT3-210ENST00000540090 CFC1BP0CG36 223 aa10.94□□□□□ -0.66
LPCAT3-210ENST00000540090 S100A12P80511 92 aa10.94□□□□□ -0.66
LPCAT3-210ENST00000540090 Q9BRP9 147 aa10.94□□□□□ -0.66
LPCAT3-210ENST00000540090 CLLU1Q5K131 121 aa10.93□□□□□ -0.66
LPCAT3-210ENST00000540090 UQCC3Q6UW78 93 aa10.93□□□□□ -0.66
LPCAT3-210ENST00000540090 LINC00587B1AMM8 73 aa10.92□□□□□ -0.66
LPCAT3-210ENST00000540090 HERV-K104P63124 156 aa10.92□□□□□ -0.66
LPCAT3-210ENST00000540090 PCOTHQ58A44 107 aa10.89□□□□□ -0.67
LPCAT3-210ENST00000540090 Q6ZRX8 168 aa10.89□□□□□ -0.67
LPCAT3-210ENST00000540090 TRAV12-1A0A0B4J245 112 aa10.88□□□□□ -0.67
LPCAT3-210ENST00000540090 LOC107984156A0A0G2JMH3 177 aa10.88□□□□□ -0.67
LPCAT3-210ENST00000540090 LORP23490 312 aaPredicted RBP10.88□□□□□ -0.67
LPCAT3-210ENST00000540090 DDTP30046 118 aa10.88□□□□□ -0.67
LPCAT3-210ENST00000540090 ARL17AQ8IVW1 177 aa10.88□□□□□ -0.67
LPCAT3-210ENST00000540090 TRAPPC1Q9Y5R8 145 aa10.88□□□□□ -0.67
LPCAT3-210ENST00000540090 IGLV8-61A0A075B6I0 122 aa10.87□□□□□ -0.67
LPCAT3-210ENST00000540090 TRBV10-2A0A0K0K1G8 114 aa10.87□□□□□ -0.67
LPCAT3-210ENST00000540090 MAP1LC3CQ9BXW4 147 aa10.87□□□□□ -0.67
LPCAT3-210ENST00000540090 C9orf153Q5TBE3 101 aa10.86□□□□□ -0.67
LPCAT3-210ENST00000540090 KRTAP10-6P60371 365 aaPredicted RBP10.85□□□□□ -0.67
LPCAT3-210ENST00000540090 MYMXA0A1B0GTQ4 84 aa10.84□□□□□ -0.67
LPCAT3-210ENST00000540090 IFI27L1Q96BM0 104 aa10.83□□□□□ -0.68
LPCAT3-210ENST00000540090 RPS10P5Q9NQ39 176 aa10.82□□□□□ -0.68
LPCAT3-210ENST00000540090 JOSD1Q15040 202 aaPredicted RBP10.81□□□□□ -0.68
LPCAT3-210ENST00000540090 RHEBQ15382 184 aa10.81□□□□□ -0.68
LPCAT3-210ENST00000540090 IGLV6-57P01721 117 aa10.8□□□□□ -0.68
LPCAT3-210ENST00000540090 SPANXB1Q9NS25 103 aaPredicted RBP10.8□□□□□ -0.68
LPCAT3-210ENST00000540090 ST20-AS1Q8NBB2 130 aa10.79□□□□□ -0.68
LPCAT3-210ENST00000540090 C9orf92A6NGG3 77 aa10.78□□□□□ -0.68
LPCAT3-210ENST00000540090 C5orf52A6NGY3 159 aa10.78□□□□□ -0.68
LPCAT3-210ENST00000540090 C10orf91Q5T1B1 145 aa10.78□□□□□ -0.68
LPCAT3-210ENST00000540090 S100A7L2Q5SY68 101 aa10.77□□□□□ -0.69
LPCAT3-210ENST00000540090 CHCHD1Q96BP2 118 aaKnown RBP10.77□□□□□ -0.69
LPCAT3-210ENST00000540090 LIMD2Q9BT23 127 aa10.77□□□□□ -0.69
LPCAT3-210ENST00000540090 TRAV23DV6A0A075B6W5 121 aa10.76□□□□□ -0.69
LPCAT3-210ENST00000540090 NDUFC2O95298 119 aa10.76□□□□□ -0.69
LPCAT3-210ENST00000540090 TSPEAR-AS2P59090 65 aa10.76□□□□□ -0.69
LPCAT3-210ENST00000540090 ZNF73O43830 326 aaPredicted RBP10.74□□□□□ -0.69
LPCAT3-210ENST00000540090 MIEN1Q9BRT3 115 aa10.74□□□□□ -0.69
LPCAT3-210ENST00000540090 FLGP20930 4061 aaPredicted RBP10.73□□□□□ -0.69
LPCAT3-210ENST00000540090 LEPROTO15243 131 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms