RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 RAB4AP20338 218 aa1.96□□□□□ -2.1
C2CD3-214ENST00000540057 LINC00483Q53H64 154 aa1.96□□□□□ -2.1
C2CD3-214ENST00000540057 LCE1CQ5T751 118 aa1.96□□□□□ -2.1
C2CD3-214ENST00000540057 LCE1BQ5T7P3 118 aa1.96□□□□□ -2.1
C2CD3-214ENST00000540057 Q6ZN92 141 aa1.96□□□□□ -2.1
C2CD3-214ENST00000540057 C11orf52Q96A22 123 aa1.96□□□□□ -2.1
C2CD3-214ENST00000540057 SMIM12Q96EX1 92 aa1.96□□□□□ -2.1
C2CD3-214ENST00000540057 ALKBH7Q9BT30 221 aaPredicted RBP1.96□□□□□ -2.1
C2CD3-214ENST00000540057 SPANXA1Q9NS26 97 aa1.96□□□□□ -2.1
C2CD3-214ENST00000540057 BORCS7-ASMTA0A0B4J1R7 106 aa1.95□□□□□ -2.1
C2CD3-214ENST00000540057 A0A1B0GV50 99 aa1.95□□□□□ -2.1
C2CD3-214ENST00000540057 C20orf202A1L168 122 aa1.95□□□□□ -2.1
C2CD3-214ENST00000540057 VPREB1P12018 145 aa1.95□□□□□ -2.1
C2CD3-214ENST00000540057 GNG4P50150 75 aa1.95□□□□□ -2.1
C2CD3-214ENST00000540057 CCL20P78556 96 aa1.95□□□□□ -2.1
C2CD3-214ENST00000540057 FAM231DQ6ZW35 169 aa1.95□□□□□ -2.1
C2CD3-214ENST00000540057 AMN1Q8IY45 258 aa1.95□□□□□ -2.1
C2CD3-214ENST00000540057 KCNRGQ8N5I3 272 aa1.95□□□□□ -2.1
C2CD3-214ENST00000540057 SMCR5Q8TEV8 140 aa1.95□□□□□ -2.1
C2CD3-214ENST00000540057 TMEM191AQ9H0A3 160 aa1.95□□□□□ -2.1
C2CD3-214ENST00000540057 GPR98Q8WXG9 6306 aa1.95□□□□□ -2.1
C2CD3-214ENST00000540057 IGLV4-3A0A075B6K6 122 aa1.94□□□□□ -2.1
C2CD3-214ENST00000540057 SSNA1O43805 119 aa1.94□□□□□ -2.1
C2CD3-214ENST00000540057 CXCL5P42830 114 aa1.94□□□□□ -2.1
C2CD3-214ENST00000540057 RAB5BP61020 215 aa1.94□□□□□ -2.1
C2CD3-214ENST00000540057 Q8NDZ9 215 aa1.94□□□□□ -2.1
C2CD3-214ENST00000540057 SFT2D1Q8WV19 159 aa1.94□□□□□ -2.1
C2CD3-214ENST00000540057 MBD3L1Q8WWY6 194 aa1.94□□□□□ -2.1
C2CD3-214ENST00000540057 TIMM17AQ99595 171 aa1.94□□□□□ -2.1
C2CD3-214ENST00000540057 BIN3Q9NQY0 253 aa1.94□□□□□ -2.1
C2CD3-214ENST00000540057 CHTOPQ9Y3Y2 248 aaKnown RBP1.94□□□□□ -2.1
C2CD3-214ENST00000540057 K7EN84 100 aa1.93□□□□□ -2.1
C2CD3-214ENST00000540057 PPP1R2P9O14990 202 aa1.93□□□□□ -2.1
C2CD3-214ENST00000540057 PPP1R17O96001 155 aa1.93□□□□□ -2.1
C2CD3-214ENST00000540057 IFI27P40305 119 aaPredicted RBP1.93□□□□□ -2.1
C2CD3-214ENST00000540057 Q5BKY6 102 aa1.93□□□□□ -2.1
C2CD3-214ENST00000540057 FAM19A3Q7Z5A8 133 aa1.93□□□□□ -2.1
C2CD3-214ENST00000540057 TMEM141Q96I45 108 aa1.93□□□□□ -2.1
C2CD3-214ENST00000540057 MED9Q9NWA0 146 aa1.93□□□□□ -2.1
C2CD3-214ENST00000540057 TCAPO15273 167 aa1.92□□□□□ -2.1
C2CD3-214ENST00000540057 ERC2-IT1O76042 136 aa1.92□□□□□ -2.1
C2CD3-214ENST00000540057 GIPP09681 153 aaPredicted RBP1.92□□□□□ -2.1
C2CD3-214ENST00000540057 C9orf153Q5TBE3 101 aa1.92□□□□□ -2.1
C2CD3-214ENST00000540057 TEX43Q6ZNM6 134 aa1.92□□□□□ -2.1
C2CD3-214ENST00000540057 AKAP14Q86UN6 197 aa1.92□□□□□ -2.1
C2CD3-214ENST00000540057 FAM213BQ8TBF2 198 aa1.92□□□□□ -2.1
C2CD3-214ENST00000540057 ENKURQ8TC29 256 aa1.92□□□□□ -2.1
C2CD3-214ENST00000540057 BORCS7Q96B45 105 aa1.92□□□□□ -2.1
C2CD3-214ENST00000540057 C20orf78Q9BR46 151 aa1.92□□□□□ -2.1
C2CD3-214ENST00000540057 LIMD2Q9BT23 127 aa1.92□□□□□ -2.1
C2CD3-214ENST00000540057 SMIM2Q9BVW6 85 aa1.92□□□□□ -2.1
C2CD3-214ENST00000540057 KRTAP2-1Q9BYU5 128 aa1.92□□□□□ -2.1
C2CD3-214ENST00000540057 EIF5A2Q9GZV4 153 aaKnown RBP1.92□□□□□ -2.1
C2CD3-214ENST00000540057 GNG13Q9P2W3 67 aa1.92□□□□□ -2.1
C2CD3-214ENST00000540057 CDKN2A-AS1Q9UH64 79 aa1.92□□□□□ -2.1
C2CD3-214ENST00000540057 TRBV24-1A0A075B6N3 115 aa1.91□□□□□ -2.1
C2CD3-214ENST00000540057 A0A1B0GUT8 65 aa1.91□□□□□ -2.1
C2CD3-214ENST00000540057 A8MWL6 223 aa1.91□□□□□ -2.1
C2CD3-214ENST00000540057 GATCO43716 136 aaKnown RBP1.91□□□□□ -2.1
C2CD3-214ENST00000540057 SPRR1AP35321 89 aa1.91□□□□□ -2.1
C2CD3-214ENST00000540057 RAB14P61106 215 aa1.91□□□□□ -2.1
C2CD3-214ENST00000540057 MRPL51Q4U2R6 128 aaKnown RBP1.91□□□□□ -2.1
C2CD3-214ENST00000540057 HRCT1Q6UXD1 115 aa1.91□□□□□ -2.1
C2CD3-214ENST00000540057 C2orf66Q6UXQ4 117 aa1.91□□□□□ -2.1
C2CD3-214ENST00000540057 OCC1Q8TAD7 63 aa1.91□□□□□ -2.1
C2CD3-214ENST00000540057 C20orf166-AS1Q96NR2 134 aa1.91□□□□□ -2.1
C2CD3-214ENST00000540057 AMELXQ99217 191 aa1.91□□□□□ -2.1
C2CD3-214ENST00000540057 C2orf88Q9BSF0 95 aa1.91□□□□□ -2.1
C2CD3-214ENST00000540057 SND1-IT1Q9HBX3 110 aa1.91□□□□□ -2.1
C2CD3-214ENST00000540057 MANBALQ9NQG1 85 aa1.91□□□□□ -2.1
C2CD3-214ENST00000540057 LINC00862A6NCI5 91 aa1.9□□□□□ -2.11
C2CD3-214ENST00000540057 HIGD1CA8MV81 97 aa1.9□□□□□ -2.11
C2CD3-214ENST00000540057 PDE6DO43924 150 aa1.9□□□□□ -2.11
C2CD3-214ENST00000540057 PFN2P35080 140 aa1.9□□□□□ -2.11
C2CD3-214ENST00000540057 HERVK_113P63121 156 aa1.9□□□□□ -2.11
C2CD3-214ENST00000540057 COX7B2Q8TF08 81 aa1.9□□□□□ -2.11
C2CD3-214ENST00000540057 FAM218AQ96MZ4 157 aa1.9□□□□□ -2.11
C2CD3-214ENST00000540057 VCX2Q9H322 139 aa1.9□□□□□ -2.11
C2CD3-214ENST00000540057 PRO0461Q9UI25 63 aa1.9□□□□□ -2.11
C2CD3-214ENST00000540057 FXYD6-FXYD2A0A087WZ82 144 aa1.89□□□□□ -2.11
C2CD3-214ENST00000540057 ETDCA0A1B0GVM5 59 aa1.89□□□□□ -2.11
C2CD3-214ENST00000540057 UMAD1C9J7I0 102 aa1.89□□□□□ -2.11
C2CD3-214ENST00000540057 NPYP01303 97 aa1.89□□□□□ -2.11
C2CD3-214ENST00000540057 SEC11AP67812 179 aa1.89□□□□□ -2.11
C2CD3-214ENST00000540057 IFITM3Q01628 133 aa1.89□□□□□ -2.11
C2CD3-214ENST00000540057 PDZD11Q5EBL8 140 aa1.89□□□□□ -2.11
C2CD3-214ENST00000540057 C1orf195Q5TG92 126 aa1.89□□□□□ -2.11
C2CD3-214ENST00000540057 FAM104BQ5XKR9 115 aa1.89□□□□□ -2.11
C2CD3-214ENST00000540057 ATP11AUNQ6ZP68 121 aa1.89□□□□□ -2.11
C2CD3-214ENST00000540057 TRBV20-1A0A075B6N2 111 aa1.88□□□□□ -2.11
C2CD3-214ENST00000540057 ATP5LO75964 103 aa1.88□□□□□ -2.11
C2CD3-214ENST00000540057 RAB5AP20339 215 aa1.88□□□□□ -2.11
C2CD3-214ENST00000540057 CKS2P33552 79 aa1.88□□□□□ -2.11
C2CD3-214ENST00000540057 Q6ZVH6 145 aa1.88□□□□□ -2.11
C2CD3-214ENST00000540057 Q9BRP9 147 aa1.88□□□□□ -2.11
C2CD3-214ENST00000540057 KCNQ1DNQ9H478 68 aa1.88□□□□□ -2.11
C2CD3-214ENST00000540057 ERG28Q9UKR5 140 aa1.88□□□□□ -2.11
C2CD3-214ENST00000540057 TRAV9-1A0A075B6T8 112 aa1.87□□□□□ -2.11
C2CD3-214ENST00000540057 LOC389332A0A1B0GUA5 103 aa1.87□□□□□ -2.11
C2CD3-214ENST00000540057 IGIPA6NJ69 53 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms