RNA–Protein interactions for RNA: ENST00000539953.1

SCNN1A-214, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 2

Gene SCNN1A, Length 401 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-214ENST00000539953 NDUFA6P56556 154 aa7.05□□□□□ -1.28
SCNN1A-214ENST00000539953 UQCC3Q6UW78 93 aa7.05□□□□□ -1.28
SCNN1A-214ENST00000539953 HIGD2AQ9BW72 106 aa7.05□□□□□ -1.28
SCNN1A-214ENST00000539953 COX19Q49B96 90 aa7.04□□□□□ -1.28
SCNN1A-214ENST00000539953 PMCHL1Q16048 86 aa7.03□□□□□ -1.28
SCNN1A-214ENST00000539953 SPAG11AQ6PDA7 123 aa7.03□□□□□ -1.28
SCNN1A-214ENST00000539953 C18orf32Q8TCD1 76 aa7.03□□□□□ -1.28
SCNN1A-214ENST00000539953 SEC11CQ9BY50 192 aa7.03□□□□□ -1.28
SCNN1A-214ENST00000539953 LINC00614P0C842 121 aa7.02□□□□□ -1.29
SCNN1A-214ENST00000539953 KRTAP13-3Q3SY46 172 aa7.02□□□□□ -1.29
SCNN1A-214ENST00000539953 FP248Q71RG6 208 aaPredicted RBP7.02□□□□□ -1.29
SCNN1A-214ENST00000539953 HBDP02042 147 aa7.01□□□□□ -1.29
SCNN1A-214ENST00000539953 IFITM2Q01629 132 aa7.01□□□□□ -1.29
SCNN1A-214ENST00000539953 TMEM170BQ5T4T1 132 aa7.01□□□□□ -1.29
SCNN1A-214ENST00000539953 SFTA2Q6UW10 78 aa7.01□□□□□ -1.29
SCNN1A-214ENST00000539953 BAGE3Q86Y29 109 aa7.01□□□□□ -1.29
SCNN1A-214ENST00000539953 KRTAP4-1Q9BYQ7 146 aa7.01□□□□□ -1.29
SCNN1A-214ENST00000539953 KRTAP4-16G5E9R7 235 aaPredicted RBP7□□□□□ -1.29
SCNN1A-214ENST00000539953 SPRR1AP35321 89 aa7□□□□□ -1.29
SCNN1A-214ENST00000539953 LINC00158P58513 81 aa7□□□□□ -1.29
SCNN1A-214ENST00000539953 C10orf91Q5T1B1 145 aa7□□□□□ -1.29
SCNN1A-214ENST00000539953 DAND5Q8N907 189 aa7□□□□□ -1.29
SCNN1A-214ENST00000539953 A0A0U1RRA0 63 aa6.99□□□□□ -1.29
SCNN1A-214ENST00000539953 ASB16-AS1Q495Z4 193 aa6.99□□□□□ -1.29
SCNN1A-214ENST00000539953 Q8NBF4 154 aa6.99□□□□□ -1.29
SCNN1A-214ENST00000539953 TMEM223A0PJW6 202 aa6.98□□□□□ -1.29
SCNN1A-214ENST00000539953 PRYO14603 147 aa6.98□□□□□ -1.29
SCNN1A-214ENST00000539953 KCNQ1DNQ9H478 68 aa6.98□□□□□ -1.29
SCNN1A-214ENST00000539953 ZNF706Q9Y5V0 76 aaPredicted RBP6.98□□□□□ -1.29
SCNN1A-214ENST00000539953 SMIM13P0DJ93 91 aa6.97□□□□□ -1.29
SCNN1A-214ENST00000539953 C4orf48Q5BLP8 95 aa6.97□□□□□ -1.29
SCNN1A-214ENST00000539953 LINC00337Q8N6G1 96 aa6.97□□□□□ -1.29
SCNN1A-214ENST00000539953 SMCR5Q8TEV8 140 aa6.97□□□□□ -1.29
SCNN1A-214ENST00000539953 RPS10P5Q9NQ39 176 aa6.97□□□□□ -1.29
SCNN1A-214ENST00000539953 CHTOPQ9Y3Y2 248 aaKnown RBP6.97□□□□□ -1.29
SCNN1A-214ENST00000539953 TRAPPC1Q9Y5R8 145 aa6.97□□□□□ -1.29
SCNN1A-214ENST00000539953 NCR3O14931 201 aa6.96□□□□□ -1.3
SCNN1A-214ENST00000539953 RHEBQ15382 184 aa6.96□□□□□ -1.3
SCNN1A-214ENST00000539953 LINC00483Q53H64 154 aa6.96□□□□□ -1.3
SCNN1A-214ENST00000539953 BOD1L2Q8IYS8 172 aa6.96□□□□□ -1.3
SCNN1A-214ENST00000539953 SPINK1P00995 79 aa6.95□□□□□ -1.3
SCNN1A-214ENST00000539953 COMMD7Q86VX2 200 aa6.95□□□□□ -1.3
SCNN1A-214ENST00000539953 TRAV12-1A0A0B4J245 112 aa6.94□□□□□ -1.3
SCNN1A-214ENST00000539953 MIR7-3HGQ8N6C7 128 aa6.94□□□□□ -1.3
SCNN1A-214ENST00000539953 TRBV10-3A0A0K0K1G6 114 aa6.93□□□□□ -1.3
SCNN1A-214ENST00000539953 ETDCA0A1B0GVM5 59 aa6.92□□□□□ -1.3
SCNN1A-214ENST00000539953 ERC2-IT1O76042 136 aa6.92□□□□□ -1.3
SCNN1A-214ENST00000539953 Q8N377 158 aa6.92□□□□□ -1.3
SCNN1A-214ENST00000539953 B5MCH6 92 aa6.91□□□□□ -1.3
SCNN1A-214ENST00000539953 MEIG1Q5JSS6 88 aa6.91□□□□□ -1.3
SCNN1A-214ENST00000539953 GAGE2AQ6NT46 116 aa6.91□□□□□ -1.3
SCNN1A-214ENST00000539953 IFI27L1Q96BM0 104 aa6.91□□□□□ -1.3
SCNN1A-214ENST00000539953 ATP6V1G1O75348 118 aa6.9□□□□□ -1.3
SCNN1A-214ENST00000539953 SEC61BP60468 96 aaKnown RBP6.9□□□□□ -1.3
SCNN1A-214ENST00000539953 RPS29P62273 56 aaKnown RBP6.9□□□□□ -1.3
SCNN1A-214ENST00000539953 HERV-K104P63124 156 aa6.9□□□□□ -1.3
SCNN1A-214ENST00000539953 MOBPQ13875 183 aa6.9□□□□□ -1.3
SCNN1A-214ENST00000539953 LCE2DQ5TA82 110 aaPredicted RBP6.9□□□□□ -1.3
SCNN1A-214ENST00000539953 Q9BRP9 147 aa6.9□□□□□ -1.3
SCNN1A-214ENST00000539953 LOC107984156A0A0G2JMH3 177 aa6.89□□□□□ -1.31
SCNN1A-214ENST00000539953 LINC01547P58512 204 aaPredicted RBP6.89□□□□□ -1.31
SCNN1A-214ENST00000539953 TSPEAR-AS2P59090 65 aa6.89□□□□□ -1.31
SCNN1A-214ENST00000539953 ARL17AQ8IVW1 177 aa6.89□□□□□ -1.31
SCNN1A-214ENST00000539953 CHCHD1Q96BP2 118 aaKnown RBP6.89□□□□□ -1.31
SCNN1A-214ENST00000539953 NDUFA12Q9UI09 145 aa6.89□□□□□ -1.31
SCNN1A-214ENST00000539953 IGLV9-49A0A0B4J1Y8 123 aa6.88□□□□□ -1.31
SCNN1A-214ENST00000539953 SSBP3-AS1Q7Z2R9 100 aa6.88□□□□□ -1.31
SCNN1A-214ENST00000539953 YPEL4Q96NS1 127 aa6.88□□□□□ -1.31
SCNN1A-214ENST00000539953 XP32Q5T750 250 aa6.87□□□□□ -1.31
SCNN1A-214ENST00000539953 LCE2CQ5TA81 110 aa6.87□□□□□ -1.31
SCNN1A-214ENST00000539953 MYMXA0A1B0GTQ4 84 aa6.86□□□□□ -1.31
SCNN1A-214ENST00000539953 LINC00587B1AMM8 73 aa6.86□□□□□ -1.31
SCNN1A-214ENST00000539953 Q6ZRX8 168 aa6.86□□□□□ -1.31
SCNN1A-214ENST00000539953 TRBV10-2A0A0K0K1G8 114 aa6.85□□□□□ -1.31
SCNN1A-214ENST00000539953 SLC25A20O43772 301 aa6.85□□□□□ -1.31
SCNN1A-214ENST00000539953 DDTP30046 118 aa6.85□□□□□ -1.31
SCNN1A-214ENST00000539953 FAM19A2Q8N3H0 131 aa6.85□□□□□ -1.31
SCNN1A-214ENST00000539953 MAP1LC3CQ9BXW4 147 aa6.85□□□□□ -1.31
SCNN1A-214ENST00000539953 APOC3P02656 99 aa6.84□□□□□ -1.31
SCNN1A-214ENST00000539953 KRTAP19-2Q3LHN2 52 aa6.84□□□□□ -1.31
SCNN1A-214ENST00000539953 FSIP2Q5CZC0 6907 aa6.83□□□□□ -1.32
SCNN1A-214ENST00000539953 LEPROTO15243 131 aa6.83□□□□□ -1.32
SCNN1A-214ENST00000539953 IGLV6-57P01721 117 aa6.83□□□□□ -1.32
SCNN1A-214ENST00000539953 EIF4EBP3O60516 100 aaPredicted RBP6.82□□□□□ -1.32
SCNN1A-214ENST00000539953 S100A12P80511 92 aa6.82□□□□□ -1.32
SCNN1A-214ENST00000539953 SPANXB1Q9NS25 103 aaPredicted RBP6.82□□□□□ -1.32
SCNN1A-214ENST00000539953 H0Y8G0 127 aa6.81□□□□□ -1.32
SCNN1A-214ENST00000539953 HSBP1O75506 76 aa6.81□□□□□ -1.32
SCNN1A-214ENST00000539953 SNAPINO95295 136 aa6.81□□□□□ -1.32
SCNN1A-214ENST00000539953 LINC00310P59036 64 aa6.81□□□□□ -1.32
SCNN1A-214ENST00000539953 SVBPQ8N300 66 aa6.81□□□□□ -1.32
SCNN1A-214ENST00000539953 J3QQQ9 107 aa6.8□□□□□ -1.32
SCNN1A-214ENST00000539953 NDUFC2O95298 119 aa6.8□□□□□ -1.32
SCNN1A-214ENST00000539953 SOSTDC1Q6X4U4 206 aa6.8□□□□□ -1.32
SCNN1A-214ENST00000539953 ST20-AS1Q8NBB2 130 aa6.8□□□□□ -1.32
SCNN1A-214ENST00000539953 CRCT1Q9UGL9 99 aa6.8□□□□□ -1.32
SCNN1A-214ENST00000539953 TRAV23DV6A0A075B6W5 121 aa6.79□□□□□ -1.32
SCNN1A-214ENST00000539953 C9orf153Q5TBE3 101 aa6.79□□□□□ -1.32
SCNN1A-214ENST00000539953 S100A7L2Q5SY68 101 aa6.78□□□□□ -1.32
SCNN1A-214ENST00000539953 ZNF73O43830 326 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms