RNA–Protein interactions for RNA: ENST00000539662.1

HMGA2-209, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3

Gene HMGA2, Length 485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-209ENST00000539662 IGLV7-43P04211 117 aa6.52□□□□□ -1.37
HMGA2-209ENST00000539662 UBE2BP63146 152 aa6.52□□□□□ -1.37
HMGA2-209ENST00000539662 GAGE10A6NGK3 116 aa6.51□□□□□ -1.37
HMGA2-209ENST00000539662 RPL37AP8A6NKH3 93 aa6.51□□□□□ -1.37
HMGA2-209ENST00000539662 LINC00167Q96N53 147 aa6.51□□□□□ -1.37
HMGA2-209ENST00000539662 SND1-IT1Q9HBX3 110 aa6.51□□□□□ -1.37
HMGA2-209ENST00000539662 HMCN2Q8NDA2 5059 aa6.5□□□□□ -1.37
HMGA2-209ENST00000539662 MRPL55Q7Z7F7 128 aaKnown RBP6.5□□□□□ -1.37
HMGA2-209ENST00000539662 LINC01600Q96MT4 127 aa6.5□□□□□ -1.37
HMGA2-209ENST00000539662 HSPB8Q9UJY1 196 aa6.5□□□□□ -1.37
HMGA2-209ENST00000539662 SMIM13P0DJ93 91 aa6.49□□□□□ -1.37
HMGA2-209ENST00000539662 VPREB1P12018 145 aa6.49□□□□□ -1.37
HMGA2-209ENST00000539662 PLA2G2DQ9UNK4 145 aa6.49□□□□□ -1.37
HMGA2-209ENST00000539662 IGLV5-37A0A075B6J1 123 aa6.48□□□□□ -1.37
HMGA2-209ENST00000539662 ATP6V1G1O75348 118 aa6.48□□□□□ -1.37
HMGA2-209ENST00000539662 DPM2O94777 84 aa6.48□□□□□ -1.37
HMGA2-209ENST00000539662 LINC00158P58513 81 aa6.48□□□□□ -1.37
HMGA2-209ENST00000539662 KRTAP10-8P60410 259 aa6.48□□□□□ -1.37
HMGA2-209ENST00000539662 TP73-AS1Q9UF72 201 aa6.48□□□□□ -1.37
HMGA2-209ENST00000539662 SYS1-DBNDD2H3BUS1 97 aa6.47□□□□□ -1.37
HMGA2-209ENST00000539662 IGKCP01834 107 aa6.47□□□□□ -1.37
HMGA2-209ENST00000539662 COA6Q5JTJ3 125 aaKnown RBP6.47□□□□□ -1.37
HMGA2-209ENST00000539662 MAP1LC3CQ9BXW4 147 aa6.47□□□□□ -1.37
HMGA2-209ENST00000539662 NDUFA12Q9UI09 145 aa6.47□□□□□ -1.37
HMGA2-209ENST00000539662 IGKV2-28A0A075B6P5 120 aa6.46□□□□□ -1.38
HMGA2-209ENST00000539662 LEPROTO15243 131 aa6.46□□□□□ -1.38
HMGA2-209ENST00000539662 IGKV2D-28P01615 120 aa6.46□□□□□ -1.38
HMGA2-209ENST00000539662 PLNP26678 52 aa6.46□□□□□ -1.38
HMGA2-209ENST00000539662 COX17Q14061 63 aa6.46□□□□□ -1.38
HMGA2-209ENST00000539662 LBHQ53QV2 105 aaPredicted RBP6.46□□□□□ -1.38
HMGA2-209ENST00000539662 H0Y9J4 135 aa6.45□□□□□ -1.38
HMGA2-209ENST00000539662 J3QQQ9 107 aa6.45□□□□□ -1.38
HMGA2-209ENST00000539662 KRTAP1-4P0C5Y4 121 aa6.45□□□□□ -1.38
HMGA2-209ENST00000539662 C3orf79P0CE67 100 aa6.45□□□□□ -1.38
HMGA2-209ENST00000539662 REG3GQ6UW15 175 aa6.45□□□□□ -1.38
HMGA2-209ENST00000539662 DAND5Q8N907 189 aa6.45□□□□□ -1.38
HMGA2-209ENST00000539662 NKAPP1Q8N9T2 125 aa6.45□□□□□ -1.38
HMGA2-209ENST00000539662 TMEM238C9JI98 176 aa6.44□□□□□ -1.38
HMGA2-209ENST00000539662 MEIG1Q5JSS6 88 aa6.44□□□□□ -1.38
HMGA2-209ENST00000539662 LINC01545Q5VT33 79 aa6.44□□□□□ -1.38
HMGA2-209ENST00000539662 MIR7-3HGQ8N6C7 128 aa6.44□□□□□ -1.38
HMGA2-209ENST00000539662 PRR26Q8N8Z3 221 aa6.44□□□□□ -1.38
HMGA2-209ENST00000539662 DIRC1Q969H9 104 aa6.44□□□□□ -1.38
HMGA2-209ENST00000539662 IGLV1-50A0A075B6I6 118 aa6.43□□□□□ -1.38
HMGA2-209ENST00000539662 ZNF861PO60384 105 aa6.43□□□□□ -1.38
HMGA2-209ENST00000539662 BCE1O60756 84 aa6.43□□□□□ -1.38
HMGA2-209ENST00000539662 S100A1P23297 94 aa6.43□□□□□ -1.38
HMGA2-209ENST00000539662 SFTA2Q6UW10 78 aa6.43□□□□□ -1.38
HMGA2-209ENST00000539662 PLEKHB2Q96CS7 222 aa6.43□□□□□ -1.38
HMGA2-209ENST00000539662 IGKV2D-26A0A0A0MRZ7 120 aa6.42□□□□□ -1.38
HMGA2-209ENST00000539662 MYMXA0A1B0GTQ4 84 aa6.42□□□□□ -1.38
HMGA2-209ENST00000539662 HERV-K104P63124 156 aa6.42□□□□□ -1.38
HMGA2-209ENST00000539662 KRTAP13-1Q8IUC0 172 aa6.42□□□□□ -1.38
HMGA2-209ENST00000539662 TTTY13Q9BZ97 58 aa6.42□□□□□ -1.38
HMGA2-209ENST00000539662 E9PLD3 99 aa6.41□□□□□ -1.38
HMGA2-209ENST00000539662 NCR3O14931 201 aa6.41□□□□□ -1.38
HMGA2-209ENST00000539662 LGALS3P17931 250 aaKnown RBP6.41□□□□□ -1.38
HMGA2-209ENST00000539662 KRTDAPP60985 99 aa6.41□□□□□ -1.38
HMGA2-209ENST00000539662 BOD1L2Q8IYS8 172 aa6.41□□□□□ -1.38
HMGA2-209ENST00000539662 A0A0J9YXY3 114 aa6.4□□□□□ -1.38
HMGA2-209ENST00000539662 M0R378 163 aa6.4□□□□□ -1.38
HMGA2-209ENST00000539662 HERVK_113P61574 105 aa6.4□□□□□ -1.38
HMGA2-209ENST00000539662 PRLHP81277 87 aa6.4□□□□□ -1.38
HMGA2-209ENST00000539662 RPL24P83731 157 aaKnown RBP6.4□□□□□ -1.38
HMGA2-209ENST00000539662 ADAMTSL4-AS1Q5T5F5 129 aa6.4□□□□□ -1.38
HMGA2-209ENST00000539662 TMEM126AQ9H061 195 aa6.4□□□□□ -1.38
HMGA2-209ENST00000539662 ANAPC11Q9NYG5 84 aa6.4□□□□□ -1.38
HMGA2-209ENST00000539662 SMCPP49901 116 aaPredicted RBP6.39□□□□□ -1.39
HMGA2-209ENST00000539662 NPC2P61916 151 aa6.39□□□□□ -1.39
HMGA2-209ENST00000539662 SOSTDC1Q6X4U4 206 aa6.39□□□□□ -1.39
HMGA2-209ENST00000539662 ATOH7Q8N100 152 aa6.39□□□□□ -1.39
HMGA2-209ENST00000539662 NMUP48645 174 aa6.38□□□□□ -1.39
HMGA2-209ENST00000539662 HIST3H2BBQ8N257 126 aa6.38□□□□□ -1.39
HMGA2-209ENST00000539662 A0A087X002 238 aa6.37□□□□□ -1.39
HMGA2-209ENST00000539662 RPL28P46779 137 aaKnown RBP6.37□□□□□ -1.39
HMGA2-209ENST00000539662 UBE2AP49459 152 aa6.37□□□□□ -1.39
HMGA2-209ENST00000539662 FAM19A1Q7Z5A9 133 aa6.37□□□□□ -1.39
HMGA2-209ENST00000539662 LITAFQ99732 161 aa6.37□□□□□ -1.39
HMGA2-209ENST00000539662 LOC107984156A0A0G2JMH3 177 aa6.36□□□□□ -1.39
HMGA2-209ENST00000539662 TRBV10-3A0A0K0K1G6 114 aa6.36□□□□□ -1.39
HMGA2-209ENST00000539662 ARL17AQ8IVW1 177 aa6.36□□□□□ -1.39
HMGA2-209ENST00000539662 HIST1H2BLQ99880 126 aa6.36□□□□□ -1.39
HMGA2-209ENST00000539662 UBR4Q5T4S7 5183 aa6.36□□□□□ -1.39
HMGA2-209ENST00000539662 LINC00587B1AMM8 73 aa6.35□□□□□ -1.39
HMGA2-209ENST00000539662 ZNF815PA8K554 130 aa6.33□□□□□ -1.4
HMGA2-209ENST00000539662 KRTAP4-16G5E9R7 235 aaPredicted RBP6.33□□□□□ -1.4
HMGA2-209ENST00000539662 KRTAP13-2Q52LG2 175 aa6.33□□□□□ -1.4
HMGA2-209ENST00000539662 KCNQ1DNQ9H478 68 aa6.33□□□□□ -1.4
HMGA2-209ENST00000539662 PRYO14603 147 aa6.32□□□□□ -1.4
HMGA2-209ENST00000539662 SPRR1AP35321 89 aa6.32□□□□□ -1.4
HMGA2-209ENST00000539662 SNRPEP62304 92 aaKnown RBP6.32□□□□□ -1.4
HMGA2-209ENST00000539662 PCP2Q8IVA1 136 aa6.32□□□□□ -1.4
HMGA2-209ENST00000539662 LRP2P98164 4655 aa6.32□□□□□ -1.4
HMGA2-209ENST00000539662 LPAP08519 4548 aa6.31□□□□□ -1.4
HMGA2-209ENST00000539662 LINC00308Q8TCZ7 52 aa6.31□□□□□ -1.4
HMGA2-209ENST00000539662 HIGD2AQ9BW72 106 aa6.31□□□□□ -1.4
HMGA2-209ENST00000539662 C20orf202A1L168 122 aa6.3□□□□□ -1.4
HMGA2-209ENST00000539662 DDTP30046 118 aa6.3□□□□□ -1.4
HMGA2-209ENST00000539662 TRBV10-2A0A0K0K1G8 114 aa6.29□□□□□ -1.4
HMGA2-209ENST00000539662 TIMM17BO60830 172 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms