RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 WFDC10BQ8IUB3 73 aa9.49□□□□□ -0.89
UBE3B-210ENST00000539599 ORMDL1Q9P0S3 153 aa9.49□□□□□ -0.89
UBE3B-210ENST00000539599 KLK5Q9Y337 293 aaPredicted RBP9.49□□□□□ -0.89
UBE3B-210ENST00000539599 Q8N814 137 aa9.48□□□□□ -0.89
UBE3B-210ENST00000539599 WFDC9Q8NEX5 89 aa9.48□□□□□ -0.89
UBE3B-210ENST00000539599 MIFP14174 115 aa9.47□□□□□ -0.89
UBE3B-210ENST00000539599 S100A7L2Q5SY68 101 aa9.47□□□□□ -0.89
UBE3B-210ENST00000539599 LELP1Q5T871 98 aa9.46□□□□□ -0.89
UBE3B-210ENST00000539599 LYPD5Q6UWN5 251 aa9.46□□□□□ -0.9
UBE3B-210ENST00000539599 OBSCN-AS1Q96MR7 158 aa9.46□□□□□ -0.9
UBE3B-210ENST00000539599 TMEM126AQ9H061 195 aa9.46□□□□□ -0.9
UBE3B-210ENST00000539599 KRTAP10-11P60412 298 aa9.45□□□□□ -0.9
UBE3B-210ENST00000539599 Q6ZTC4 211 aa9.45□□□□□ -0.9
UBE3B-210ENST00000539599 C6orf48Q9UBA6 75 aa9.45□□□□□ -0.9
UBE3B-210ENST00000539599 M0R2N4 97 aa9.44□□□□□ -0.9
UBE3B-210ENST00000539599 LINC01561Q8N1V8 128 aa9.44□□□□□ -0.9
UBE3B-210ENST00000539599 LYSTQ99698 3801 aa9.44□□□□□ -0.9
UBE3B-210ENST00000539599 COX17Q14061 63 aa9.43□□□□□ -0.9
UBE3B-210ENST00000539599 NBEAL1Q6ZS30 2694 aa9.43□□□□□ -0.9
UBE3B-210ENST00000539599 PRR34Q9NV39 138 aa9.42□□□□□ -0.9
UBE3B-210ENST00000539599 NDUFC2O95298 119 aa9.42□□□□□ -0.9
UBE3B-210ENST00000539599 TRBV10-3A0A0K0K1G6 114 aa9.41□□□□□ -0.9
UBE3B-210ENST00000539599 KPRPQ5T749 579 aaPredicted RBP9.41□□□□□ -0.9
UBE3B-210ENST00000539599 BAHCC1Q9P281 2608 aa9.41□□□□□ -0.9
UBE3B-210ENST00000539599 IMUPQ9GZP8 106 aa9.4□□□□□ -0.9
UBE3B-210ENST00000539599 COL6A5A8TX70 2615 aa9.4□□□□□ -0.91
UBE3B-210ENST00000539599 LINC00167Q96N53 147 aa9.4□□□□□ -0.91
UBE3B-210ENST00000539599 CSMD3Q7Z407 3707 aa9.39□□□□□ -0.91
UBE3B-210ENST00000539599 LINC00575Q6W349 94 aa9.39□□□□□ -0.91
UBE3B-210ENST00000539599 CYSTM1Q9H1C7 97 aa9.39□□□□□ -0.91
UBE3B-210ENST00000539599 PRB2P02812 416 aaPredicted RBP9.39□□□□□ -0.91
UBE3B-210ENST00000539599 HIST1H4AP62805 103 aaKnown RBP9.39□□□□□ -0.91
UBE3B-210ENST00000539599 CCKP06307 115 aa9.38□□□□□ -0.91
UBE3B-210ENST00000539599 Q6ZQY7 126 aa9.38□□□□□ -0.91
UBE3B-210ENST00000539599 A0A0J9YWU9 116 aa9.37□□□□□ -0.91
UBE3B-210ENST00000539599 DNAH10Q8IVF4 4471 aa9.37□□□□□ -0.91
UBE3B-210ENST00000539599 ESRGQ1W209 222 aa9.37□□□□□ -0.91
UBE3B-210ENST00000539599 SMIM20Q8N5G0 67 aa9.37□□□□□ -0.91
UBE3B-210ENST00000539599 hADV29S1A0JD25 119 aa9.36□□□□□ -0.91
UBE3B-210ENST00000539599 C9orf153Q5TBE3 101 aa9.36□□□□□ -0.91
UBE3B-210ENST00000539599 Q6ZRU5 148 aa9.36□□□□□ -0.91
UBE3B-210ENST00000539599 LAMTOR3Q9UHA4 124 aa9.36□□□□□ -0.91
UBE3B-210ENST00000539599 TMEM256-PLSCR3K7ERE1 68 aa9.36□□□□□ -0.91
UBE3B-210ENST00000539599 FAM19A1Q7Z5A9 133 aa9.36□□□□□ -0.91
UBE3B-210ENST00000539599 CAMK2N2Q96S95 79 aa9.36□□□□□ -0.91
UBE3B-210ENST00000539599 IGLV6-57P01721 117 aa9.35□□□□□ -0.91
UBE3B-210ENST00000539599 ZNF561-AS1K7EIQ3 104 aa9.35□□□□□ -0.91
UBE3B-210ENST00000539599 A0A1B0GX51 115 aa9.34□□□□□ -0.91
UBE3B-210ENST00000539599 Q6JHZ5 121 aa9.34□□□□□ -0.91
UBE3B-210ENST00000539599 KRTAP26-1Q6PEX3 210 aa9.34□□□□□ -0.91
UBE3B-210ENST00000539599 C3orf22Q8N5N4 141 aa9.34□□□□□ -0.91
UBE3B-210ENST00000539599 C15orf56Q8N910 161 aa9.34□□□□□ -0.91
UBE3B-210ENST00000539599 C2orf48Q96LS8 159 aa9.34□□□□□ -0.91
UBE3B-210ENST00000539599 TRAV23DV6A0A075B6W5 121 aa9.33□□□□□ -0.92
UBE3B-210ENST00000539599 DNAH3Q8TD57 4116 aa9.32□□□□□ -0.92
UBE3B-210ENST00000539599 IGKV2D-24A0A075B6R9 120 aa9.32□□□□□ -0.92
UBE3B-210ENST00000539599 JMJD7-PLA2G4BH0Y9G9 81 aa9.31□□□□□ -0.92
UBE3B-210ENST00000539599 HUWE1Q7Z6Z7 4374 aaKnown RBP9.31□□□□□ -0.92
UBE3B-210ENST00000539599 KRTAP24-1Q3LI83 254 aa9.31□□□□□ -0.92
UBE3B-210ENST00000539599 DNAH1Q9P2D7 4330 aa9.3□□□□□ -0.92
UBE3B-210ENST00000539599 RBM3P98179 157 aaKnown RBP9.3□□□□□ -0.92
UBE3B-210ENST00000539599 USP17L23D6RBM5 183 aa9.29□□□□□ -0.92
UBE3B-210ENST00000539599 ZNF73O43830 326 aaPredicted RBP9.29□□□□□ -0.92
UBE3B-210ENST00000539599 Q6ZRP5 223 aa9.29□□□□□ -0.92
UBE3B-210ENST00000539599 VPREB1P12018 145 aa9.29□□□□□ -0.92
UBE3B-210ENST00000539599 Q6ZQT0 140 aa9.29□□□□□ -0.92
UBE3B-210ENST00000539599 UQCRQO14949 82 aa9.29□□□□□ -0.92
UBE3B-210ENST00000539599 WIPF1O43516 503 aa9.29□□□□□ -0.92
UBE3B-210ENST00000539599 COX7CP15954 63 aa9.29□□□□□ -0.92
UBE3B-210ENST00000539599 DIRC1Q969H9 104 aa9.29□□□□□ -0.92
UBE3B-210ENST00000539599 DEFB131BA0A096LNP1 70 aa9.28□□□□□ -0.92
UBE3B-210ENST00000539599 CASC10Q5T4H9 136 aa9.28□□□□□ -0.92
UBE3B-210ENST00000539599 SCXQ7RTU7 201 aa9.28□□□□□ -0.92
UBE3B-210ENST00000539599 MGAM2Q2M2H8 2515 aa9.28□□□□□ -0.92
UBE3B-210ENST00000539599 GVQW2A0A096LPI5 108 aaPredicted RBP9.27□□□□□ -0.93
UBE3B-210ENST00000539599 ATOX1O00244 68 aa9.26□□□□□ -0.93
UBE3B-210ENST00000539599 C1orf43Q9BWL3 253 aa9.26□□□□□ -0.93
UBE3B-210ENST00000539599 COX7BP24311 80 aa9.25□□□□□ -0.93
UBE3B-210ENST00000539599 HAMPP81172 84 aa9.25□□□□□ -0.93
UBE3B-210ENST00000539599 MRAPQ8TCY5 172 aa9.25□□□□□ -0.93
UBE3B-210ENST00000539599 DNAH9Q9NYC9 4486 aa9.24□□□□□ -0.93
UBE3B-210ENST00000539599 C11orf45Q8TAV5 145 aa9.24□□□□□ -0.93
UBE3B-210ENST00000539599 TENM2Q9NT68 2774 aa9.24□□□□□ -0.93
UBE3B-210ENST00000539599 SERTAD4-AS1Q5TG53 156 aa9.24□□□□□ -0.93
UBE3B-210ENST00000539599 LOC107984640A0A0U1RRK4 108 aa9.24□□□□□ -0.93
UBE3B-210ENST00000539599 UBL5Q9BZL1 73 aa9.24□□□□□ -0.93
UBE3B-210ENST00000539599 FAM168BA1KXE4 195 aa9.23□□□□□ -0.93
UBE3B-210ENST00000539599 NDUFC2-KCTD14E9PQ53 114 aa9.23□□□□□ -0.93
UBE3B-210ENST00000539599 DSCR8Q96T75 97 aa9.23□□□□□ -0.93
UBE3B-210ENST00000539599 UPK3BQ9BT76 320 aa9.23□□□□□ -0.93
UBE3B-210ENST00000539599 COL7A1Q02388 2944 aa9.23□□□□□ -0.93
UBE3B-210ENST00000539599 ELOF1P60002 83 aaKnown RBP9.23□□□□□ -0.93
UBE3B-210ENST00000539599 STAB2Q8WWQ8 2551 aa9.23□□□□□ -0.93
UBE3B-210ENST00000539599 GHRHP01286 108 aa9.22□□□□□ -0.93
UBE3B-210ENST00000539599 EGFEM1PQ0D2K5 195 aa9.22□□□□□ -0.93
UBE3B-210ENST00000539599 DEFB105AQ8NG35 78 aa9.22□□□□□ -0.93
UBE3B-210ENST00000539599 Q6ZVQ6 151 aa9.21□□□□□ -0.93
UBE3B-210ENST00000539599 RPL37AP8A6NKH3 93 aa9.21□□□□□ -0.94
UBE3B-210ENST00000539599 MUC7Q8TAX7 377 aa9.21□□□□□ -0.94
UBE3B-210ENST00000539599 LINC01547P58512 204 aaPredicted RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms