RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 SFTA2Q6UW10 78 aa11.26□□□□□ -0.61
TNFRSF1A-212ENST00000539372 TRAV12-1A0A0B4J245 112 aa11.25□□□□□ -0.61
TNFRSF1A-212ENST00000539372 LINC00158P58513 81 aa11.25□□□□□ -0.61
TNFRSF1A-212ENST00000539372 RNF213Q63HN8 5207 aa11.25□□□□□ -0.61
TNFRSF1A-212ENST00000539372 A0A0U1RRA0 63 aa11.24□□□□□ -0.61
TNFRSF1A-212ENST00000539372 PRLHP81277 87 aa11.24□□□□□ -0.61
TNFRSF1A-212ENST00000539372 FAM19A2Q8N3H0 131 aa11.24□□□□□ -0.61
TNFRSF1A-212ENST00000539372 TYMSOSQ8TAI1 123 aa11.24□□□□□ -0.61
TNFRSF1A-212ENST00000539372 FAM19A1Q7Z5A9 133 aa11.23□□□□□ -0.61
TNFRSF1A-212ENST00000539372 TMEM126AQ9H061 195 aa11.23□□□□□ -0.61
TNFRSF1A-212ENST00000539372 M0R378 163 aa11.21□□□□□ -0.61
TNFRSF1A-212ENST00000539372 HSBP1O75506 76 aa11.21□□□□□ -0.61
TNFRSF1A-212ENST00000539372 H0Y8G0 127 aa11.2□□□□□ -0.62
TNFRSF1A-212ENST00000539372 KRTAP13-2Q52LG2 175 aa11.2□□□□□ -0.62
TNFRSF1A-212ENST00000539372 TRGC2P03986 189 aa11.19□□□□□ -0.62
TNFRSF1A-212ENST00000539372 SMIM13P0DJ93 91 aa11.19□□□□□ -0.62
TNFRSF1A-212ENST00000539372 MEIG1Q5JSS6 88 aa11.17□□□□□ -0.62
TNFRSF1A-212ENST00000539372 ATP6V1G1O75348 118 aa11.16□□□□□ -0.62
TNFRSF1A-212ENST00000539372 FAM229BQ4G0N7 80 aa11.16□□□□□ -0.62
TNFRSF1A-212ENST00000539372 SERF1AO75920 110 aa11.15□□□□□ -0.62
TNFRSF1A-212ENST00000539372 LINC00310P59036 64 aa11.15□□□□□ -0.62
TNFRSF1A-212ENST00000539372 BOD1L2Q8IYS8 172 aa11.14□□□□□ -0.63
TNFRSF1A-212ENST00000539372 MIR7-3HGQ8N6C7 128 aa11.14□□□□□ -0.63
TNFRSF1A-212ENST00000539372 NDUFA12Q9UI09 145 aa11.14□□□□□ -0.63
TNFRSF1A-212ENST00000539372 IGKV2D-26A0A0A0MRZ7 120 aa11.13□□□□□ -0.63
TNFRSF1A-212ENST00000539372 LEPROTL1O95214 131 aa11.13□□□□□ -0.63
TNFRSF1A-212ENST00000539372 HERV-K104P63124 156 aa11.13□□□□□ -0.63
TNFRSF1A-212ENST00000539372 HIGD2AQ9BW72 106 aa11.13□□□□□ -0.63
TNFRSF1A-212ENST00000539372 NCR3O14931 201 aa11.12□□□□□ -0.63
TNFRSF1A-212ENST00000539372 PLEKHB2Q96CS7 222 aa11.12□□□□□ -0.63
TNFRSF1A-212ENST00000539372 LINC00304Q8N9R0 145 aa11.11□□□□□ -0.63
TNFRSF1A-212ENST00000539372 MYMXA0A1B0GTQ4 84 aa11.1□□□□□ -0.63
TNFRSF1A-212ENST00000539372 TSPEAR-AS2P59090 65 aa11.1□□□□□ -0.63
TNFRSF1A-212ENST00000539372 FABP4P15090 132 aa11.09□□□□□ -0.63
TNFRSF1A-212ENST00000539372 COLCA2A8K830 154 aa11.08□□□□□ -0.64
TNFRSF1A-212ENST00000539372 LINC00587B1AMM8 73 aa11.08□□□□□ -0.64
TNFRSF1A-212ENST00000539372 LEPROTO15243 131 aa11.08□□□□□ -0.64
TNFRSF1A-212ENST00000539372 RETNLBQ9BQ08 111 aa11.08□□□□□ -0.64
TNFRSF1A-212ENST00000539372 PMCHL2Q9BQD1 86 aa11.08□□□□□ -0.64
TNFRSF1A-212ENST00000539372 HSPB8Q9UJY1 196 aa11.08□□□□□ -0.64
TNFRSF1A-212ENST00000539372 PRYO14603 147 aa11.07□□□□□ -0.64
TNFRSF1A-212ENST00000539372 PLNP26678 52 aa11.07□□□□□ -0.64
TNFRSF1A-212ENST00000539372 C3orf22Q8N5N4 141 aa11.07□□□□□ -0.64
TNFRSF1A-212ENST00000539372 DAND5Q8N907 189 aa11.07□□□□□ -0.64
TNFRSF1A-212ENST00000539372 MAP1LC3CQ9BXW4 147 aa11.07□□□□□ -0.64
TNFRSF1A-212ENST00000539372 SPRR4Q96PI1 79 aa11.05□□□□□ -0.64
TNFRSF1A-212ENST00000539372 KCNQ1DNQ9H478 68 aa11.05□□□□□ -0.64
TNFRSF1A-212ENST00000539372 TRBV10-3A0A0K0K1G6 114 aa11.04□□□□□ -0.64
TNFRSF1A-212ENST00000539372 DPM2O94777 84 aa11.04□□□□□ -0.64
TNFRSF1A-212ENST00000539372 J3QQQ9 107 aa11.03□□□□□ -0.64
TNFRSF1A-212ENST00000539372 HERVK_113P61574 105 aa11.03□□□□□ -0.64
TNFRSF1A-212ENST00000539372 IGKCP01834 107 aa11.02□□□□□ -0.65
TNFRSF1A-212ENST00000539372 SPRR1AP35321 89 aa11.02□□□□□ -0.65
TNFRSF1A-212ENST00000539372 LINC00337Q8N6G1 96 aa11.02□□□□□ -0.65
TNFRSF1A-212ENST00000539372 ETDCA0A1B0GVM5 59 aa11.01□□□□□ -0.65
TNFRSF1A-212ENST00000539372 LGALS3P17931 250 aaKnown RBP11.01□□□□□ -0.65
TNFRSF1A-212ENST00000539372 S100A1P23297 94 aa11.01□□□□□ -0.65
TNFRSF1A-212ENST00000539372 ZNF706Q9Y5V0 76 aaPredicted RBP11.01□□□□□ -0.65
TNFRSF1A-212ENST00000539372 KRTAP4-16G5E9R7 235 aaPredicted RBP11□□□□□ -0.65
TNFRSF1A-212ENST00000539372 SMCR5Q8TEV8 140 aa11□□□□□ -0.65
TNFRSF1A-212ENST00000539372 PPDPFQ9H3Y8 114 aa10.99□□□□□ -0.65
TNFRSF1A-212ENST00000539372 LOC107984156A0A0G2JMH3 177 aa10.98□□□□□ -0.65
TNFRSF1A-212ENST00000539372 NMUP48645 174 aa10.98□□□□□ -0.65
TNFRSF1A-212ENST00000539372 ARL17AQ8IVW1 177 aa10.98□□□□□ -0.65
TNFRSF1A-212ENST00000539372 DDTP30046 118 aa10.97□□□□□ -0.65
TNFRSF1A-212ENST00000539372 S100A12P80511 92 aa10.97□□□□□ -0.65
TNFRSF1A-212ENST00000539372 MIEN1Q9BRT3 115 aa10.96□□□□□ -0.65
TNFRSF1A-212ENST00000539372 TRBV10-2A0A0K0K1G8 114 aa10.95□□□□□ -0.66
TNFRSF1A-212ENST00000539372 SPANXB1Q9NS25 103 aaPredicted RBP10.95□□□□□ -0.66
TNFRSF1A-212ENST00000539372 IGLV7-46A0A075B6I9 117 aa10.94□□□□□ -0.66
TNFRSF1A-212ENST00000539372 B5MCH6 92 aa10.94□□□□□ -0.66
TNFRSF1A-212ENST00000539372 NPC2P61916 151 aa10.94□□□□□ -0.66
TNFRSF1A-212ENST00000539372 CTAG1AP78358 180 aa10.93□□□□□ -0.66
TNFRSF1A-212ENST00000539372 SPAG11AQ6PDA7 123 aa10.93□□□□□ -0.66
TNFRSF1A-212ENST00000539372 Q8NBF4 154 aa10.93□□□□□ -0.66
TNFRSF1A-212ENST00000539372 A0A0J9YXY3 114 aa10.92□□□□□ -0.66
TNFRSF1A-212ENST00000539372 E9PLD3 99 aa10.92□□□□□ -0.66
TNFRSF1A-212ENST00000539372 ERC2-IT1O76042 136 aa10.92□□□□□ -0.66
TNFRSF1A-212ENST00000539372 ADAMTSL4-AS1Q5T5F5 129 aa10.92□□□□□ -0.66
TNFRSF1A-212ENST00000539372 GAGE2AQ6NT46 116 aa10.92□□□□□ -0.66
TNFRSF1A-212ENST00000539372 SOSTDC1Q6X4U4 206 aa10.92□□□□□ -0.66
TNFRSF1A-212ENST00000539372 MUC2Q02817 5179 aa10.91□□□□□ -0.66
TNFRSF1A-212ENST00000539372 EIF4EBP3O60516 100 aaPredicted RBP10.91□□□□□ -0.66
TNFRSF1A-212ENST00000539372 HIST1H2BKO60814 126 aa10.91□□□□□ -0.66
TNFRSF1A-212ENST00000539372 HIST1H2BJP06899 126 aa10.91□□□□□ -0.66
TNFRSF1A-212ENST00000539372 HIST1H2BOP23527 126 aa10.91□□□□□ -0.66
TNFRSF1A-212ENST00000539372 HIST1H2BBP33778 126 aa10.91□□□□□ -0.66
TNFRSF1A-212ENST00000539372 HIST1H2BDP58876 126 aa10.91□□□□□ -0.66
TNFRSF1A-212ENST00000539372 HIST1H2BCP62807 126 aa10.91□□□□□ -0.66
TNFRSF1A-212ENST00000539372 HIST2H2BEQ16778 126 aa10.91□□□□□ -0.66
TNFRSF1A-212ENST00000539372 C4orf48Q5BLP8 95 aa10.91□□□□□ -0.66
TNFRSF1A-212ENST00000539372 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.91□□□□□ -0.66
TNFRSF1A-212ENST00000539372 S100A7L2Q5SY68 101 aa10.91□□□□□ -0.66
TNFRSF1A-212ENST00000539372 HIST1H2BHQ93079 126 aa10.91□□□□□ -0.66
TNFRSF1A-212ENST00000539372 HIST1H2BNQ99877 126 aa10.91□□□□□ -0.66
TNFRSF1A-212ENST00000539372 HIST1H2BMQ99879 126 aa10.91□□□□□ -0.66
TNFRSF1A-212ENST00000539372 SYS1-DBNDD2H3BUS1 97 aa10.9□□□□□ -0.66
TNFRSF1A-212ENST00000539372 NDUFC2O95298 119 aa10.9□□□□□ -0.66
TNFRSF1A-212ENST00000539372 LINC00483Q53H64 154 aa10.9□□□□□ -0.66
TNFRSF1A-212ENST00000539372 Q9BRP9 147 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms