RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 S100A7L2Q5SY68 101 aa11.99□□□□□ -0.49
GNE-204ENST00000539208 LINC01556Q5JQF7 62 aa11.98□□□□□ -0.49
GNE-204ENST00000539208 CMYA5Q8N3K9 4069 aa11.97□□□□□ -0.49
GNE-204ENST00000539208 ZNF561-AS1K7EIQ3 104 aa11.96□□□□□ -0.49
GNE-204ENST00000539208 IGLV6-57P01721 117 aa11.96□□□□□ -0.49
GNE-204ENST00000539208 SLPIP03973 132 aa11.96□□□□□ -0.49
GNE-204ENST00000539208 TRBV7-7A0A0K0K1E9 115 aa11.96□□□□□ -0.5
GNE-204ENST00000539208 PKD1L1Q8TDX9 2849 aa11.96□□□□□ -0.5
GNE-204ENST00000539208 C6orf99Q4VX62 202 aa11.95□□□□□ -0.5
GNE-204ENST00000539208 C9orf129Q5T035 196 aaKnown RBP11.95□□□□□ -0.5
GNE-204ENST00000539208 DNAH3Q8TD57 4116 aa11.95□□□□□ -0.5
GNE-204ENST00000539208 LINC00643Q86TS7 51 aa11.95□□□□□ -0.5
GNE-204ENST00000539208 C2orf48Q96LS8 159 aa11.95□□□□□ -0.5
GNE-204ENST00000539208 GAGE2AQ6NT46 116 aa11.94□□□□□ -0.5
GNE-204ENST00000539208 STAB1Q9NY15 2570 aa11.94□□□□□ -0.5
GNE-204ENST00000539208 SMCR5Q8TEV8 140 aa11.94□□□□□ -0.5
GNE-204ENST00000539208 CAMK2N2Q96S95 79 aa11.94□□□□□ -0.5
GNE-204ENST00000539208 FLNBO75369 2602 aaKnown RBP11.93□□□□□ -0.5
GNE-204ENST00000539208 F8WDY8 70 aa11.93□□□□□ -0.5
GNE-204ENST00000539208 C15orf56Q8N910 161 aa11.93□□□□□ -0.5
GNE-204ENST00000539208 IMUPQ9GZP8 106 aa11.93□□□□□ -0.5
GNE-204ENST00000539208 TMEM256-PLSCR3K7ERE1 68 aa11.92□□□□□ -0.5
GNE-204ENST00000539208 LINC00575Q6W349 94 aa11.92□□□□□ -0.5
GNE-204ENST00000539208 C1orf43Q9BWL3 253 aa11.92□□□□□ -0.5
GNE-204ENST00000539208 C14orf132Q9NPU4 83 aa11.92□□□□□ -0.5
GNE-204ENST00000539208 ANK2Q01484 3957 aa11.92□□□□□ -0.5
GNE-204ENST00000539208 NDUFV3P56181 108 aaKnown RBP11.92□□□□□ -0.5
GNE-204ENST00000539208 RPL18AQ02543 176 aaKnown RBP11.92□□□□□ -0.5
GNE-204ENST00000539208 HIGD2BQ4VC39 106 aa11.92□□□□□ -0.5
GNE-204ENST00000539208 ANAPC13Q9BS18 74 aa11.92□□□□□ -0.5
GNE-204ENST00000539208 DNAH10OSP0CZ25 163 aa11.9□□□□□ -0.5
GNE-204ENST00000539208 TENM3Q9P273 2699 aa11.9□□□□□ -0.5
GNE-204ENST00000539208 MAST4O15021 2626 aa11.9□□□□□ -0.51
GNE-204ENST00000539208 TRAV10A0A0B4J240 114 aa11.89□□□□□ -0.51
GNE-204ENST00000539208 JMJD7-PLA2G4BH0Y9G9 81 aa11.89□□□□□ -0.51
GNE-204ENST00000539208 TM2D3Q9BRN9 247 aa11.89□□□□□ -0.51
GNE-204ENST00000539208 XAGE1AQ9HD64 81 aa11.89□□□□□ -0.51
GNE-204ENST00000539208 Q6ZRU5 148 aa11.88□□□□□ -0.51
GNE-204ENST00000539208 NHLRC4P0CG21 123 aaPredicted RBP11.87□□□□□ -0.51
GNE-204ENST00000539208 TRBV10-3A0A0K0K1G6 114 aa11.86□□□□□ -0.51
GNE-204ENST00000539208 hADV29S1A0JD25 119 aa11.86□□□□□ -0.51
GNE-204ENST00000539208 NDUFC2-KCTD14E9PQ53 114 aa11.86□□□□□ -0.51
GNE-204ENST00000539208 IGKV2D-24A0A075B6R9 120 aa11.86□□□□□ -0.51
GNE-204ENST00000539208 TRAV23DV6A0A075B6W5 121 aa11.85□□□□□ -0.51
GNE-204ENST00000539208 VPREB1P12018 145 aa11.85□□□□□ -0.51
GNE-204ENST00000539208 CCKP06307 115 aa11.84□□□□□ -0.51
GNE-204ENST00000539208 BAHCC1Q9P281 2608 aa11.83□□□□□ -0.52
GNE-204ENST00000539208 TRBV7-6A0A0J9YX20 115 aa11.83□□□□□ -0.52
GNE-204ENST00000539208 DIRC1Q969H9 104 aa11.83□□□□□ -0.52
GNE-204ENST00000539208 H3BQ85 93 aa11.82□□□□□ -0.52
GNE-204ENST00000539208 K7EIL1 84 aa11.82□□□□□ -0.52
GNE-204ENST00000539208 M0R378 163 aa11.82□□□□□ -0.52
GNE-204ENST00000539208 ZNF73O43830 326 aaPredicted RBP11.81□□□□□ -0.52
GNE-204ENST00000539208 LINC00588Q9Y4M8 146 aa11.81□□□□□ -0.52
GNE-204ENST00000539208 PRB2P02812 416 aaPredicted RBP11.81□□□□□ -0.52
GNE-204ENST00000539208 SYCNQ0VAF6 134 aa11.81□□□□□ -0.52
GNE-204ENST00000539208 LINC00846Q9NV44 126 aa11.81□□□□□ -0.52
GNE-204ENST00000539208 Q6ZRP5 223 aa11.79□□□□□ -0.52
GNE-204ENST00000539208 COX7BP24311 80 aa11.78□□□□□ -0.52
GNE-204ENST00000539208 ELOF1P60002 83 aaKnown RBP11.78□□□□□ -0.52
GNE-204ENST00000539208 Q6JHZ5 121 aa11.77□□□□□ -0.53
GNE-204ENST00000539208 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.75□□□□□ -0.53
GNE-204ENST00000539208 Q6ZQY7 126 aa11.75□□□□□ -0.53
GNE-204ENST00000539208 MRAPQ8TCY5 172 aa11.75□□□□□ -0.53
GNE-204ENST00000539208 TLX1NBP0CAT3 122 aa11.75□□□□□ -0.53
GNE-204ENST00000539208 GHRHP01286 108 aa11.74□□□□□ -0.53
GNE-204ENST00000539208 RBM3P98179 157 aaKnown RBP11.74□□□□□ -0.53
GNE-204ENST00000539208 UPK3BQ9BT76 320 aa11.74□□□□□ -0.53
GNE-204ENST00000539208 NOTCH1P46531 2555 aa11.74□□□□□ -0.53
GNE-204ENST00000539208 LOC110117498A0A087WWA1 95 aa11.74□□□□□ -0.53
GNE-204ENST00000539208 FAM236AA0A1B0GUQ0 79 aa11.74□□□□□ -0.53
GNE-204ENST00000539208 FAM236BA0A1B0GV22 79 aa11.74□□□□□ -0.53
GNE-204ENST00000539208 COL6A5A8TX70 2615 aa11.73□□□□□ -0.53
GNE-204ENST00000539208 RMI2Q96E14 147 aa11.73□□□□□ -0.53
GNE-204ENST00000539208 LAMTOR3Q9UHA4 124 aa11.71□□□□□ -0.53
GNE-204ENST00000539208 Q6ZQT0 140 aa11.71□□□□□ -0.54
GNE-204ENST00000539208 PLA2G2DQ9UNK4 145 aa11.71□□□□□ -0.54
GNE-204ENST00000539208 LINC00528Q8N1L1 170 aa11.7□□□□□ -0.54
GNE-204ENST00000539208 USP17L23D6RBM5 183 aa11.69□□□□□ -0.54
GNE-204ENST00000539208 NBEAL1Q6ZS30 2694 aa11.69□□□□□ -0.54
GNE-204ENST00000539208 PDE6GP18545 87 aa11.69□□□□□ -0.54
GNE-204ENST00000539208 CCDC179H3BU77 68 aa11.68□□□□□ -0.54
GNE-204ENST00000539208 KCNQ1DNQ9H478 68 aa11.68□□□□□ -0.54
GNE-204ENST00000539208 HIST1H4AP62805 103 aaKnown RBP11.67□□□□□ -0.54
GNE-204ENST00000539208 NKAPP1Q8N9T2 125 aa11.67□□□□□ -0.54
GNE-204ENST00000539208 IGKV3D-7A0A0C4DH55 119 aa11.67□□□□□ -0.54
GNE-204ENST00000539208 CASC10Q5T4H9 136 aa11.67□□□□□ -0.54
GNE-204ENST00000539208 ATP5EP2Q5VTU8 51 aa11.67□□□□□ -0.54
GNE-204ENST00000539208 DSCR8Q96T75 97 aa11.66□□□□□ -0.54
GNE-204ENST00000539208 SERTAD4-AS1Q5TG53 156 aa11.65□□□□□ -0.54
GNE-204ENST00000539208 IGLV5-37A0A075B6J1 123 aa11.65□□□□□ -0.54
GNE-204ENST00000539208 C7orf33Q8WU49 177 aa11.64□□□□□ -0.55
GNE-204ENST00000539208 UBL5Q9BZL1 73 aa11.64□□□□□ -0.55
GNE-204ENST00000539208 HUWE1Q7Z6Z7 4374 aaKnown RBP11.63□□□□□ -0.55
GNE-204ENST00000539208 B5MCH6 92 aa11.62□□□□□ -0.55
GNE-204ENST00000539208 TRBV7-4A0A0J9YYF1 115 aa11.61□□□□□ -0.55
GNE-204ENST00000539208 ATOX1O00244 68 aa11.6□□□□□ -0.55
GNE-204ENST00000539208 DNAH1Q9P2D7 4330 aa11.57□□□□□ -0.56
GNE-204ENST00000539208 IGLV1-50A0A075B6I6 118 aa11.57□□□□□ -0.56
GNE-204ENST00000539208 LOC107984640A0A0U1RRK4 108 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 179.3 ms