RNA–Protein interactions for RNA: ENST00000539019.1

SSPN-206, Transcript of sarcospan, humanhuman

TSL 1 (best)

Gene SSPN, Length 1,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-206ENST00000539019 CIRBPQ14011 172 aaKnown RBP3.19□□□□□ -1.9
SSPN-206ENST00000539019 SDIM1Q6ZPB5 146 aa3.19□□□□□ -1.9
SSPN-206ENST00000539019 BAGE3Q86Y29 109 aa3.19□□□□□ -1.9
SSPN-206ENST00000539019 FAM19A2Q8N3H0 131 aa3.19□□□□□ -1.9
SSPN-206ENST00000539019 TMEM141Q96I45 108 aa3.19□□□□□ -1.9
SSPN-206ENST00000539019 IGHV3-64A0A075B6Q5 118 aa3.18□□□□□ -1.9
SSPN-206ENST00000539019 TRAV13-1A0A0B4J241 112 aa3.18□□□□□ -1.9
SSPN-206ENST00000539019 A0A0J9YXV3 536 aa3.18□□□□□ -1.9
SSPN-206ENST00000539019 HBDP02042 147 aa3.18□□□□□ -1.9
SSPN-206ENST00000539019 IGLC3P0DOY3 106 aa3.18□□□□□ -1.9
SSPN-206ENST00000539019 XCL1P47992 114 aa3.18□□□□□ -1.9
SSPN-206ENST00000539019 CTAG1AP78358 180 aa3.18□□□□□ -1.9
SSPN-206ENST00000539019 AMMECR1LQ6DCA0 310 aa3.18□□□□□ -1.9
SSPN-206ENST00000539019 PET117Q6UWS5 81 aa3.18□□□□□ -1.9
SSPN-206ENST00000539019 Q6ZVQ6 151 aa3.18□□□□□ -1.9
SSPN-206ENST00000539019 FA2HQ7L5A8 372 aa3.18□□□□□ -1.9
SSPN-206ENST00000539019 LINC01561Q8N1V8 128 aa3.18□□□□□ -1.9
SSPN-206ENST00000539019 C9orf163Q8N9P6 203 aa3.18□□□□□ -1.9
SSPN-206ENST00000539019 TRAV12-1A0A0B4J245 112 aa3.17□□□□□ -1.9
SSPN-206ENST00000539019 C11orf86A6NJI1 115 aa3.17□□□□□ -1.9
SSPN-206ENST00000539019 LINC00587B1AMM8 73 aa3.17□□□□□ -1.9
SSPN-206ENST00000539019 KRTAP10-4P60372 401 aaPredicted RBP3.17□□□□□ -1.9
SSPN-206ENST00000539019 LINC01620Q4KN68 170 aa3.17□□□□□ -1.9
SSPN-206ENST00000539019 C5orf38Q86SI9 138 aa3.17□□□□□ -1.9
SSPN-206ENST00000539019 LINC00526Q96FQ7 95 aa3.17□□□□□ -1.9
SSPN-206ENST00000539019 TMEM101Q96IK0 257 aa3.17□□□□□ -1.9
SSPN-206ENST00000539019 SCGB3A1Q96QR1 104 aa3.17□□□□□ -1.9
SSPN-206ENST00000539019 CDKN2A-AS1Q9UH64 79 aa3.17□□□□□ -1.9
SSPN-206ENST00000539019 IGKV3OR2-268A0A0C4DH90 116 aa3.16□□□□□ -1.9
SSPN-206ENST00000539019 TINCRA0A1B0GVN0 87 aa3.16□□□□□ -1.9
SSPN-206ENST00000539019 LINC01549A6NIU2 74 aa3.16□□□□□ -1.9
SSPN-206ENST00000539019 CRPP02741 224 aa3.16□□□□□ -1.9
SSPN-206ENST00000539019 ZNF22P17026 224 aaPredicted RBP3.16□□□□□ -1.9
SSPN-206ENST00000539019 DDTP30046 118 aa3.16□□□□□ -1.9
SSPN-206ENST00000539019 PMVKQ15126 192 aa3.16□□□□□ -1.9
SSPN-206ENST00000539019 RMI2Q96E14 147 aa3.16□□□□□ -1.9
SSPN-206ENST00000539019 VCX2Q9H322 139 aa3.16□□□□□ -1.9
SSPN-206ENST00000539019 IGHV1-58A0A0C4DH39 117 aa3.15□□□□□ -1.9
SSPN-206ENST00000539019 COX7A2LO14548 114 aa3.15□□□□□ -1.9
SSPN-206ENST00000539019 HSBP1O75506 76 aa3.15□□□□□ -1.9
SSPN-206ENST00000539019 G0S2P27469 103 aa3.15□□□□□ -1.9
SSPN-206ENST00000539019 SS18Q15532 418 aa3.15□□□□□ -1.9
SSPN-206ENST00000539019 LBHQ53QV2 105 aaPredicted RBP3.15□□□□□ -1.9
SSPN-206ENST00000539019 TEX43Q6ZNM6 134 aa3.15□□□□□ -1.9
SSPN-206ENST00000539019 Q6ZRU5 148 aa3.15□□□□□ -1.9
SSPN-206ENST00000539019 IFI27L1Q96BM0 104 aa3.15□□□□□ -1.9
SSPN-206ENST00000539019 MRPL35Q9NZE8 188 aaKnown RBP3.15□□□□□ -1.9
SSPN-206ENST00000539019 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.14□□□□□ -1.91
SSPN-206ENST00000539019 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.14□□□□□ -1.91
SSPN-206ENST00000539019 ATP5LO75964 103 aa3.14□□□□□ -1.91
SSPN-206ENST00000539019 SMAGPQ0VAQ4 97 aa3.14□□□□□ -1.91
SSPN-206ENST00000539019 LINC01545Q5VT33 79 aa3.14□□□□□ -1.91
SSPN-206ENST00000539019 PRO1933Q9H354 126 aa3.14□□□□□ -1.91
SSPN-206ENST00000539019 C6orf48Q9UBA6 75 aa3.14□□□□□ -1.91
SSPN-206ENST00000539019 TMEM223A0PJW6 202 aa3.13□□□□□ -1.91
SSPN-206ENST00000539019 C20orf202A1L168 122 aa3.13□□□□□ -1.91
SSPN-206ENST00000539019 C16orf90A8MZG2 172 aa3.13□□□□□ -1.91
SSPN-206ENST00000539019 F8VRH5 84 aa3.13□□□□□ -1.91
SSPN-206ENST00000539019 SYS1-DBNDD2H3BUS1 97 aa3.13□□□□□ -1.91
SSPN-206ENST00000539019 PSCAO43653 123 aa3.13□□□□□ -1.91
SSPN-206ENST00000539019 LEPROTL1O95214 131 aa3.13□□□□□ -1.91
SSPN-206ENST00000539019 TLX1NBP0CAT3 122 aa3.13□□□□□ -1.91
SSPN-206ENST00000539019 C3orf79P0CE67 100 aa3.13□□□□□ -1.91
SSPN-206ENST00000539019 TSPEAR-AS2P59090 65 aa3.13□□□□□ -1.91
SSPN-206ENST00000539019 KRTDAPP60985 99 aa3.13□□□□□ -1.91
SSPN-206ENST00000539019 HERVK_113P63121 156 aa3.13□□□□□ -1.91
SSPN-206ENST00000539019 C2orf82Q6UX34 121 aa3.13□□□□□ -1.91
SSPN-206ENST00000539019 UNQ6190/PRO20217Q6UXQ8 127 aa3.13□□□□□ -1.91
SSPN-206ENST00000539019 ZNF625Q96I27 306 aaPredicted RBP3.13□□□□□ -1.91
SSPN-206ENST00000539019 C14orf144Q96I85 54 aa3.13□□□□□ -1.91
SSPN-206ENST00000539019 VAMP8Q9BV40 100 aa3.13□□□□□ -1.91
SSPN-206ENST00000539019 DHRS4-AS1Q9P1J3 65 aa3.13□□□□□ -1.91
SSPN-206ENST00000539019 A0A096LNI7 61 aa3.12□□□□□ -1.91
SSPN-206ENST00000539019 SPINK8P0C7L1 97 aa3.12□□□□□ -1.91
SSPN-206ENST00000539019 CHTF8P0CG12 524 aa3.12□□□□□ -1.91
SSPN-206ENST00000539019 SPAG11BQ08648 103 aa3.12□□□□□ -1.91
SSPN-206ENST00000539019 Q6ZN92 141 aa3.12□□□□□ -1.91
SSPN-206ENST00000539019 SCXQ7RTU7 201 aa3.12□□□□□ -1.91
SSPN-206ENST00000539019 Q8IZM0 81 aa3.12□□□□□ -1.91
SSPN-206ENST00000539019 Q8NDZ9 215 aa3.12□□□□□ -1.91
SSPN-206ENST00000539019 CIRBP-AS1Q8TBR5 109 aa3.12□□□□□ -1.91
SSPN-206ENST00000539019 SPACA4Q8TDM5 124 aa3.12□□□□□ -1.91
SSPN-206ENST00000539019 C2orf88Q9BSF0 95 aa3.12□□□□□ -1.91
SSPN-206ENST00000539019 CHAC1Q9BUX1 264 aa3.12□□□□□ -1.91
SSPN-206ENST00000539019 PLAC8Q9NZF1 115 aa3.12□□□□□ -1.91
SSPN-206ENST00000539019 HSPB8Q9UJY1 196 aa3.12□□□□□ -1.91
SSPN-206ENST00000539019 FLG2Q5D862 2391 aaPredicted RBP3.12□□□□□ -1.91
SSPN-206ENST00000539019 A0A1W2PNN7 141 aa3.12□□□□□ -1.91
SSPN-206ENST00000539019 F8WDY8 70 aa3.12□□□□□ -1.91
SSPN-206ENST00000539019 M0R143 59 aa3.12□□□□□ -1.91
SSPN-206ENST00000539019 SEC11AP67812 179 aa3.12□□□□□ -1.91
SSPN-206ENST00000539019 HAMPP81172 84 aa3.12□□□□□ -1.91
SSPN-206ENST00000539019 SYCNQ0VAF6 134 aa3.12□□□□□ -1.91
SSPN-206ENST00000539019 C9orf116Q5BN46 136 aaPredicted RBP3.12□□□□□ -1.91
SSPN-206ENST00000539019 C9orf129Q5T035 196 aaKnown RBP3.12□□□□□ -1.91
SSPN-206ENST00000539019 LINC00469Q8N7U9 141 aa3.12□□□□□ -1.91
SSPN-206ENST00000539019 ORAOV1Q8WV07 137 aa3.12□□□□□ -1.91
SSPN-206ENST00000539019 PMCHL2Q9BQD1 86 aa3.12□□□□□ -1.91
SSPN-206ENST00000539019 MIEN1Q9BRT3 115 aa3.12□□□□□ -1.91
SSPN-206ENST00000539019 MAP1LC3CQ9BXW4 147 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms