RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 IGHV4-28A0A0C4DH34 117 aa9.95□□□□□ -0.82
CDCA3-207ENST00000538862 LECT2O14960 151 aa9.95□□□□□ -0.82
CDCA3-207ENST00000538862 CHCHD10Q8WYQ3 142 aaPredicted RBP9.95□□□□□ -0.82
CDCA3-207ENST00000538862 REG3AQ06141 175 aa9.94□□□□□ -0.82
CDCA3-207ENST00000538862 DEFB135Q30KP9 77 aa9.94□□□□□ -0.82
CDCA3-207ENST00000538862 GAGE2AQ6NT46 116 aa9.94□□□□□ -0.82
CDCA3-207ENST00000538862 DAD1P61803 113 aa9.94□□□□□ -0.82
CDCA3-207ENST00000538862 ANGP03950 147 aaKnown RBP9.92□□□□□ -0.82
CDCA3-207ENST00000538862 MIFP14174 115 aa9.92□□□□□ -0.82
CDCA3-207ENST00000538862 LINC00167Q96N53 147 aa9.92□□□□□ -0.82
CDCA3-207ENST00000538862 DEFB4AO15263 64 aa9.91□□□□□ -0.82
CDCA3-207ENST00000538862 B9D2Q9BPU9 175 aa9.91□□□□□ -0.82
CDCA3-207ENST00000538862 ORMDL1Q9P0S3 153 aa9.91□□□□□ -0.82
CDCA3-207ENST00000538862 KLK5Q9Y337 293 aaPredicted RBP9.91□□□□□ -0.82
CDCA3-207ENST00000538862 CRYGAP11844 174 aa9.9□□□□□ -0.82
CDCA3-207ENST00000538862 NANOS2P60321 138 aaKnown RBP9.9□□□□□ -0.82
CDCA3-207ENST00000538862 Q8NAQ8 132 aa9.9□□□□□ -0.82
CDCA3-207ENST00000538862 TMEM258P61165 79 aa9.9□□□□□ -0.83
CDCA3-207ENST00000538862 C9orf129Q5T035 196 aaKnown RBP9.9□□□□□ -0.83
CDCA3-207ENST00000538862 MUC7Q8TAX7 377 aa9.9□□□□□ -0.83
CDCA3-207ENST00000538862 C14orf132Q9NPU4 83 aa9.9□□□□□ -0.83
CDCA3-207ENST00000538862 IGLV10-54A0A075B6I4 117 aa9.89□□□□□ -0.83
CDCA3-207ENST00000538862 FAM236AA0A1B0GUQ0 79 aa9.89□□□□□ -0.83
CDCA3-207ENST00000538862 FAM236BA0A1B0GV22 79 aa9.89□□□□□ -0.83
CDCA3-207ENST00000538862 SPART-AS1P0CW21 52 aa9.88□□□□□ -0.83
CDCA3-207ENST00000538862 LELP1Q5T871 98 aa9.88□□□□□ -0.83
CDCA3-207ENST00000538862 Q8N3U1 123 aa9.88□□□□□ -0.83
CDCA3-207ENST00000538862 CELA1Q9UNI1 258 aa9.88□□□□□ -0.83
CDCA3-207ENST00000538862 HUWE1Q7Z6Z7 4374 aaKnown RBP9.88□□□□□ -0.83
CDCA3-207ENST00000538862 SLPIP03973 132 aa9.87□□□□□ -0.83
CDCA3-207ENST00000538862 PRR3P79522 188 aaKnown RBP9.87□□□□□ -0.83
CDCA3-207ENST00000538862 Q8N814 137 aa9.87□□□□□ -0.83
CDCA3-207ENST00000538862 TENM3Q9P273 2699 aa9.87□□□□□ -0.83
CDCA3-207ENST00000538862 V9GYY9 64 aa9.86□□□□□ -0.83
CDCA3-207ENST00000538862 STAB2Q8WWQ8 2551 aa9.86□□□□□ -0.83
CDCA3-207ENST00000538862 IGHV4-30-4P0DP06 118 aa9.86□□□□□ -0.83
CDCA3-207ENST00000538862 Q5XG85 94 aa9.86□□□□□ -0.83
CDCA3-207ENST00000538862 NCR3O14931 201 aa9.85□□□□□ -0.83
CDCA3-207ENST00000538862 COX7CP15954 63 aa9.85□□□□□ -0.83
CDCA3-207ENST00000538862 C9orf116Q5BN46 136 aaPredicted RBP9.85□□□□□ -0.83
CDCA3-207ENST00000538862 A0A0J9YWU9 116 aa9.84□□□□□ -0.83
CDCA3-207ENST00000538862 JMJD7-PLA2G4BH0Y9G9 81 aa9.84□□□□□ -0.83
CDCA3-207ENST00000538862 TMEM256-PLSCR3K7ERE1 68 aa9.84□□□□□ -0.83
CDCA3-207ENST00000538862 HRCT1Q6UXD1 115 aa9.84□□□□□ -0.83
CDCA3-207ENST00000538862 PRR34Q9NV39 138 aa9.84□□□□□ -0.83
CDCA3-207ENST00000538862 NBEAL2Q6ZNJ1 2754 aa9.84□□□□□ -0.83
CDCA3-207ENST00000538862 SPAG11BQ08648 103 aa9.83□□□□□ -0.84
CDCA3-207ENST00000538862 Q6JHZ5 121 aa9.83□□□□□ -0.84
CDCA3-207ENST00000538862 DPH3Q96FX2 82 aa9.83□□□□□ -0.84
CDCA3-207ENST00000538862 CCKP06307 115 aa9.82□□□□□ -0.84
CDCA3-207ENST00000538862 LINC00846Q9NV44 126 aa9.82□□□□□ -0.84
CDCA3-207ENST00000538862 C4orf26Q17RF5 130 aa9.82□□□□□ -0.84
CDCA3-207ENST00000538862 UNQ6190/PRO20217Q6UXQ8 127 aa9.82□□□□□ -0.84
CDCA3-207ENST00000538862 S100A7L2Q5SY68 101 aa9.81□□□□□ -0.84
CDCA3-207ENST00000538862 HTN3P15516 51 aa9.8□□□□□ -0.84
CDCA3-207ENST00000538862 HIST1H4AP62805 103 aaKnown RBP9.8□□□□□ -0.84
CDCA3-207ENST00000538862 C6orf99Q4VX62 202 aa9.8□□□□□ -0.84
CDCA3-207ENST00000538862 C10orf25Q5T742 122 aa9.8□□□□□ -0.84
CDCA3-207ENST00000538862 Q8NDZ9 215 aa9.8□□□□□ -0.84
CDCA3-207ENST00000538862 GVQW2A0A096LPI5 108 aaPredicted RBP9.8□□□□□ -0.84
CDCA3-207ENST00000538862 C6orf223Q8N319 242 aa9.8□□□□□ -0.84
CDCA3-207ENST00000538862 C1orf43Q9BWL3 253 aa9.8□□□□□ -0.84
CDCA3-207ENST00000538862 KLK12Q9UKR0 248 aa9.8□□□□□ -0.84
CDCA3-207ENST00000538862 ENHOQ6UWT2 76 aa9.79□□□□□ -0.84
CDCA3-207ENST00000538862 LINC00575Q6W349 94 aa9.79□□□□□ -0.84
CDCA3-207ENST00000538862 LYPD5Q6UWN5 251 aa9.78□□□□□ -0.84
CDCA3-207ENST00000538862 IGLV6-57P01721 117 aa9.77□□□□□ -0.85
CDCA3-207ENST00000538862 DNAH7Q8WXX0 4024 aa9.76□□□□□ -0.85
CDCA3-207ENST00000538862 H3BNG1 76 aa9.76□□□□□ -0.85
CDCA3-207ENST00000538862 ATOX1O00244 68 aa9.76□□□□□ -0.85
CDCA3-207ENST00000538862 TM2D3Q9BRN9 247 aa9.76□□□□□ -0.85
CDCA3-207ENST00000538862 RETNQ9HD89 108 aa9.76□□□□□ -0.85
CDCA3-207ENST00000538862 hADV29S1A0JD25 119 aa9.75□□□□□ -0.85
CDCA3-207ENST00000538862 WWC2-AS2Q96NR7 200 aa9.75□□□□□ -0.85
CDCA3-207ENST00000538862 IGKV3D-7A0A0C4DH55 119 aa9.74□□□□□ -0.85
CDCA3-207ENST00000538862 H3BQ85 93 aa9.74□□□□□ -0.85
CDCA3-207ENST00000538862 C2orf48Q96LS8 159 aa9.74□□□□□ -0.85
CDCA3-207ENST00000538862 RPL18AQ02543 176 aaKnown RBP9.73□□□□□ -0.85
CDCA3-207ENST00000538862 C6orf48Q9UBA6 75 aa9.73□□□□□ -0.85
CDCA3-207ENST00000538862 ZNF561-AS1K7EIQ3 104 aa9.72□□□□□ -0.85
CDCA3-207ENST00000538862 ATP5EP2Q5VTU8 51 aa9.72□□□□□ -0.85
CDCA3-207ENST00000538862 NDUFC2-KCTD14E9PQ53 114 aa9.71□□□□□ -0.86
CDCA3-207ENST00000538862 OXTP01178 125 aa9.71□□□□□ -0.86
CDCA3-207ENST00000538862 RBM3P98179 157 aaKnown RBP9.7□□□□□ -0.86
CDCA3-207ENST00000538862 LOC110117498A0A087WWA1 95 aa9.69□□□□□ -0.86
CDCA3-207ENST00000538862 KMT2CQ8NEZ4 4911 aaKnown RBP9.69□□□□□ -0.86
CDCA3-207ENST00000538862 TRBV10-3A0A0K0K1G6 114 aa9.68□□□□□ -0.86
CDCA3-207ENST00000538862 C1orf195Q5TG92 126 aa9.68□□□□□ -0.86
CDCA3-207ENST00000538862 TRAV23DV6A0A075B6W5 121 aa9.68□□□□□ -0.86
CDCA3-207ENST00000538862 Q6ZQT0 140 aa9.68□□□□□ -0.86
CDCA3-207ENST00000538862 WFDC10BQ8IUB3 73 aa9.68□□□□□ -0.86
CDCA3-207ENST00000538862 DIRC1Q969H9 104 aa9.68□□□□□ -0.86
CDCA3-207ENST00000538862 CSMD3Q7Z407 3707 aa9.68□□□□□ -0.86
CDCA3-207ENST00000538862 KRTAP26-1Q6PEX3 210 aa9.67□□□□□ -0.86
CDCA3-207ENST00000538862 LINC00336Q6ZUF6 198 aa9.67□□□□□ -0.86
CDCA3-207ENST00000538862 UBL5Q9BZL1 73 aa9.67□□□□□ -0.86
CDCA3-207ENST00000538862 TRBV7-6A0A0J9YX20 115 aa9.66□□□□□ -0.86
CDCA3-207ENST00000538862 XAGE1AQ9HD64 81 aa9.66□□□□□ -0.86
CDCA3-207ENST00000538862 LAMTOR3Q9UHA4 124 aa9.66□□□□□ -0.86
CDCA3-207ENST00000538862 A0A087WVE0 104 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms