RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 A0A087X002 238 aa8.88□□□□□ -0.99
RAB40B-202ENST00000538809 LEPROTL1O95214 131 aa8.88□□□□□ -0.99
RAB40B-202ENST00000538809 UBE2AP49459 152 aa8.88□□□□□ -0.99
RAB40B-202ENST00000538809 ANAPC11Q9NYG5 84 aa8.86□□□□□ -0.99
RAB40B-202ENST00000538809 A0A0U1RRA0 63 aa8.85□□□□□ -0.99
RAB40B-202ENST00000538809 TMEM238C9JI98 176 aa8.85□□□□□ -0.99
RAB40B-202ENST00000538809 RPL24P83731 157 aaKnown RBP8.85□□□□□ -0.99
RAB40B-202ENST00000538809 H0Y8G0 127 aa8.84□□□□□ -0.99
RAB40B-202ENST00000538809 LINC00158P58513 81 aa8.84□□□□□ -0.99
RAB40B-202ENST00000538809 PRLHP81277 87 aa8.84□□□□□ -0.99
RAB40B-202ENST00000538809 TSPAN13O95857 204 aa8.83□□□□□ -1
RAB40B-202ENST00000538809 SMIM13P0DJ93 91 aa8.83□□□□□ -1
RAB40B-202ENST00000538809 TSPEAR-AS2P59090 65 aa8.83□□□□□ -1
RAB40B-202ENST00000538809 PRR4Q16378 134 aa8.83□□□□□ -1
RAB40B-202ENST00000538809 FAM19A1Q7Z5A9 133 aa8.83□□□□□ -1
RAB40B-202ENST00000538809 TMEM126AQ9H061 195 aa8.83□□□□□ -1
RAB40B-202ENST00000538809 HSPB8Q9UJY1 196 aa8.83□□□□□ -1
RAB40B-202ENST00000538809 M0R378 163 aa8.82□□□□□ -1
RAB40B-202ENST00000538809 CRYGAP11844 174 aa8.82□□□□□ -1
RAB40B-202ENST00000538809 HERV-K104P63124 156 aa8.82□□□□□ -1
RAB40B-202ENST00000538809 TYMSOSQ8TAI1 123 aa8.82□□□□□ -1
RAB40B-202ENST00000538809 NDUFA12Q9UI09 145 aa8.82□□□□□ -1
RAB40B-202ENST00000538809 LEPROTO15243 131 aa8.81□□□□□ -1
RAB40B-202ENST00000538809 FABP4P15090 132 aa8.81□□□□□ -1
RAB40B-202ENST00000538809 PLNP26678 52 aa8.81□□□□□ -1
RAB40B-202ENST00000538809 HIST1H2BKO60814 126 aa8.8□□□□□ -1
RAB40B-202ENST00000538809 HIST1H2BJP06899 126 aa8.8□□□□□ -1
RAB40B-202ENST00000538809 HIST1H2BOP23527 126 aa8.8□□□□□ -1
RAB40B-202ENST00000538809 HIST1H2BBP33778 126 aa8.8□□□□□ -1
RAB40B-202ENST00000538809 HIST1H2BDP58876 126 aa8.8□□□□□ -1
RAB40B-202ENST00000538809 HIST1H2BCP62807 126 aa8.8□□□□□ -1
RAB40B-202ENST00000538809 HIST2H2BEQ16778 126 aa8.8□□□□□ -1
RAB40B-202ENST00000538809 KRTAP13-2Q52LG2 175 aa8.8□□□□□ -1
RAB40B-202ENST00000538809 MEIG1Q5JSS6 88 aa8.8□□□□□ -1
RAB40B-202ENST00000538809 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.8□□□□□ -1
RAB40B-202ENST00000538809 MIR7-3HGQ8N6C7 128 aa8.8□□□□□ -1
RAB40B-202ENST00000538809 HIST1H2BHQ93079 126 aa8.8□□□□□ -1
RAB40B-202ENST00000538809 HIST1H2BNQ99877 126 aa8.8□□□□□ -1
RAB40B-202ENST00000538809 HIST1H2BMQ99879 126 aa8.8□□□□□ -1
RAB40B-202ENST00000538809 MYMXA0A1B0GTQ4 84 aa8.79□□□□□ -1
RAB40B-202ENST00000538809 DPM2O94777 84 aa8.79□□□□□ -1
RAB40B-202ENST00000538809 PMCHL2Q9BQD1 86 aa8.79□□□□□ -1
RAB40B-202ENST00000538809 IGKCP01834 107 aa8.78□□□□□ -1
RAB40B-202ENST00000538809 PLEKHB2Q96CS7 222 aa8.78□□□□□ -1
RAB40B-202ENST00000538809 LOC107984156A0A0G2JMH3 177 aa8.77□□□□□ -1.01
RAB40B-202ENST00000538809 LINC00587B1AMM8 73 aa8.77□□□□□ -1.01
RAB40B-202ENST00000538809 J3QQQ9 107 aa8.77□□□□□ -1.01
RAB40B-202ENST00000538809 ATP6V1G1O75348 118 aa8.77□□□□□ -1.01
RAB40B-202ENST00000538809 ARL17AQ8IVW1 177 aa8.77□□□□□ -1.01
RAB40B-202ENST00000538809 NCR3O14931 201 aa8.76□□□□□ -1.01
RAB40B-202ENST00000538809 FAM229BQ4G0N7 80 aa8.76□□□□□ -1.01
RAB40B-202ENST00000538809 BOD1L2Q8IYS8 172 aa8.76□□□□□ -1.01
RAB40B-202ENST00000538809 NMUP48645 174 aa8.75□□□□□ -1.01
RAB40B-202ENST00000538809 HERVK_113P61574 105 aa8.75□□□□□ -1.01
RAB40B-202ENST00000538809 HIGD2AQ9BW72 106 aa8.75□□□□□ -1.01
RAB40B-202ENST00000538809 MAP1LC3CQ9BXW4 147 aa8.75□□□□□ -1.01
RAB40B-202ENST00000538809 IGKV2D-26A0A0A0MRZ7 120 aa8.74□□□□□ -1.01
RAB40B-202ENST00000538809 SPRR1AP35321 89 aa8.74□□□□□ -1.01
RAB40B-202ENST00000538809 SYS1-DBNDD2H3BUS1 97 aa8.73□□□□□ -1.01
RAB40B-202ENST00000538809 PRYO14603 147 aa8.73□□□□□ -1.01
RAB40B-202ENST00000538809 DAND5Q8N907 189 aa8.73□□□□□ -1.01
RAB40B-202ENST00000538809 KCNQ1DNQ9H478 68 aa8.73□□□□□ -1.01
RAB40B-202ENST00000538809 E9PLD3 99 aa8.72□□□□□ -1.01
RAB40B-202ENST00000538809 KRTAP4-16G5E9R7 235 aaPredicted RBP8.72□□□□□ -1.01
RAB40B-202ENST00000538809 LINC00304Q8N9R0 145 aa8.72□□□□□ -1.01
RAB40B-202ENST00000538809 LGALS3P17931 250 aaKnown RBP8.71□□□□□ -1.02
RAB40B-202ENST00000538809 COA6Q5JTJ3 125 aaKnown RBP8.71□□□□□ -1.02
RAB40B-202ENST00000538809 LINC01545Q5VT33 79 aa8.71□□□□□ -1.02
RAB40B-202ENST00000538809 C3orf22Q8N5N4 141 aa8.71□□□□□ -1.02
RAB40B-202ENST00000538809 RETNLBQ9BQ08 111 aa8.71□□□□□ -1.02
RAB40B-202ENST00000538809 TRBV10-3A0A0K0K1G6 114 aa8.7□□□□□ -1.02
RAB40B-202ENST00000538809 LINC00337Q8N6G1 96 aa8.7□□□□□ -1.02
RAB40B-202ENST00000538809 A0A0J9YXY3 114 aa8.68□□□□□ -1.02
RAB40B-202ENST00000538809 TRBV10-2A0A0K0K1G8 114 aa8.68□□□□□ -1.02
RAB40B-202ENST00000538809 PET117Q6UWS5 81 aa8.68□□□□□ -1.02
RAB40B-202ENST00000538809 SOSTDC1Q6X4U4 206 aa8.68□□□□□ -1.02
RAB40B-202ENST00000538809 SPRR4Q96PI1 79 aa8.68□□□□□ -1.02
RAB40B-202ENST00000538809 EIF4EBP3O60516 100 aaPredicted RBP8.67□□□□□ -1.02
RAB40B-202ENST00000538809 NDUFC2O95298 119 aa8.67□□□□□ -1.02
RAB40B-202ENST00000538809 ADAMTSL4-AS1Q5T5F5 129 aa8.67□□□□□ -1.02
RAB40B-202ENST00000538809 ETDCA0A1B0GVM5 59 aa8.66□□□□□ -1.02
RAB40B-202ENST00000538809 C3orf79P0CE67 100 aa8.66□□□□□ -1.02
RAB40B-202ENST00000538809 SPANXB1Q9NS25 103 aaPredicted RBP8.66□□□□□ -1.02
RAB40B-202ENST00000538809 SMCR5Q8TEV8 140 aa8.65□□□□□ -1.02
RAB40B-202ENST00000538809 LITAFQ99732 161 aa8.65□□□□□ -1.02
RAB40B-202ENST00000538809 DDTP30046 118 aa8.64□□□□□ -1.03
RAB40B-202ENST00000538809 PPDPFQ9H3Y8 114 aa8.64□□□□□ -1.03
RAB40B-202ENST00000538809 ZNF706Q9Y5V0 76 aaPredicted RBP8.64□□□□□ -1.03
RAB40B-202ENST00000538809 B5MCH6 92 aa8.63□□□□□ -1.03
RAB40B-202ENST00000538809 IGLV6-57P01721 117 aa8.63□□□□□ -1.03
RAB40B-202ENST00000538809 MIEN1Q9BRT3 115 aa8.63□□□□□ -1.03
RAB40B-202ENST00000538809 NPC2P61916 151 aa8.62□□□□□ -1.03
RAB40B-202ENST00000538809 TIMM17BO60830 172 aa8.61□□□□□ -1.03
RAB40B-202ENST00000538809 CTAG1AP78358 180 aa8.61□□□□□ -1.03
RAB40B-202ENST00000538809 S100A12P80511 92 aa8.6□□□□□ -1.03
RAB40B-202ENST00000538809 LINC00483Q53H64 154 aa8.6□□□□□ -1.03
RAB40B-202ENST00000538809 Q9BRP9 147 aa8.6□□□□□ -1.03
RAB40B-202ENST00000538809 TTTY13Q9BZ97 58 aa8.6□□□□□ -1.03
RAB40B-202ENST00000538809 ERC2-IT1O76042 136 aa8.59□□□□□ -1.03
RAB40B-202ENST00000538809 LINC00308Q8TCZ7 52 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms