RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 LINC00269Q8N2A0 174 aa6.12□□□□□ -1.43
SNHG1-209ENST00000538654 DIRC1Q969H9 104 aa6.12□□□□□ -1.43
SNHG1-209ENST00000538654 LINC00474Q9P2X8 69 aa6.12□□□□□ -1.43
SNHG1-209ENST00000538654 C9orf116Q5BN46 136 aaPredicted RBP6.11□□□□□ -1.43
SNHG1-209ENST00000538654 C2CD3Q4AC94 2353 aa6.11□□□□□ -1.43
SNHG1-209ENST00000538654 Q8NDZ9 215 aa6.11□□□□□ -1.43
SNHG1-209ENST00000538654 H0Y9J4 135 aa6.1□□□□□ -1.43
SNHG1-209ENST00000538654 COX7BP24311 80 aa6.1□□□□□ -1.43
SNHG1-209ENST00000538654 LINC00612Q8N6U2 182 aa6.1□□□□□ -1.43
SNHG1-209ENST00000538654 PRO0255Q9UI72 69 aa6.1□□□□□ -1.43
SNHG1-209ENST00000538654 CRYBG3Q68DQ2 2970 aa6.09□□□□□ -1.43
SNHG1-209ENST00000538654 A0A0J9YWU9 116 aa6.09□□□□□ -1.43
SNHG1-209ENST00000538654 IGHV4-30-4P0DP06 118 aa6.09□□□□□ -1.43
SNHG1-209ENST00000538654 DEFB130BP0DP73 79 aa6.09□□□□□ -1.43
SNHG1-209ENST00000538654 DEFB130AP0DP74 79 aa6.09□□□□□ -1.43
SNHG1-209ENST00000538654 SCXQ7RTU7 201 aa6.09□□□□□ -1.43
SNHG1-209ENST00000538654 CDK2AP2O75956 126 aa6.09□□□□□ -1.43
SNHG1-209ENST00000538654 FUSP35637 526 aaKnown RBP eCLIP6.09□□□□□ -1.43
SNHG1-209ENST00000538654 ESRGQ1W209 222 aa6.08□□□□□ -1.44
SNHG1-209ENST00000538654 A8MUN3 132 aa6.08□□□□□ -1.44
SNHG1-209ENST00000538654 INAFM1C9JVW0 142 aa6.08□□□□□ -1.44
SNHG1-209ENST00000538654 ANGP03950 147 aaKnown RBP6.08□□□□□ -1.44
SNHG1-209ENST00000538654 SPAG11BQ08648 103 aa6.08□□□□□ -1.44
SNHG1-209ENST00000538654 MAPK1IP1LQ8NDC0 245 aa6.08□□□□□ -1.44
SNHG1-209ENST00000538654 COL12A1Q99715 3063 aa6.08□□□□□ -1.44
SNHG1-209ENST00000538654 LINC01006Q8NI28 216 aa6.07□□□□□ -1.44
SNHG1-209ENST00000538654 ZNF73O43830 326 aaPredicted RBP6.07□□□□□ -1.44
SNHG1-209ENST00000538654 OCR1Q9BZK8 76 aa6.07□□□□□ -1.44
SNHG1-209ENST00000538654 IGLV10-54A0A075B6I4 117 aa6.06□□□□□ -1.44
SNHG1-209ENST00000538654 GVQW2A0A096LPI5 108 aaPredicted RBP6.06□□□□□ -1.44
SNHG1-209ENST00000538654 ELOF1P60002 83 aaKnown RBP6.06□□□□□ -1.44
SNHG1-209ENST00000538654 DAD1P61803 113 aa6.06□□□□□ -1.44
SNHG1-209ENST00000538654 UNQ6190/PRO20217Q6UXQ8 127 aa6.06□□□□□ -1.44
SNHG1-209ENST00000538654 NOTCH3Q9UM47 2321 aa6.06□□□□□ -1.44
SNHG1-209ENST00000538654 IGF2RP11717 2491 aa6.06□□□□□ -1.44
SNHG1-209ENST00000538654 WFDC10AQ9H1F0 79 aa6.06□□□□□ -1.44
SNHG1-209ENST00000538654 IGLV1-51P01701 117 aa6.06□□□□□ -1.44
SNHG1-209ENST00000538654 IGKV4-1P06312 121 aa6.06□□□□□ -1.44
SNHG1-209ENST00000538654 LINC00313P59037 77 aa6.06□□□□□ -1.44
SNHG1-209ENST00000538654 MPLKIPQ8TAP9 179 aa6.06□□□□□ -1.44
SNHG1-209ENST00000538654 CR1P17927 2039 aa6.05□□□□□ -1.44
SNHG1-209ENST00000538654 CYSRT1A8MQ03 144 aa6.05□□□□□ -1.44
SNHG1-209ENST00000538654 MUC6Q6W4X9 2439 aa6.05□□□□□ -1.44
SNHG1-209ENST00000538654 C10orf25Q5T742 122 aa6.05□□□□□ -1.44
SNHG1-209ENST00000538654 FAM229BQ4G0N7 80 aa6.04□□□□□ -1.44
SNHG1-209ENST00000538654 BBC3Q96PG8 261 aaPredicted RBP6.04□□□□□ -1.44
SNHG1-209ENST00000538654 SPG11Q96JI7 2443 aa6.04□□□□□ -1.44
SNHG1-209ENST00000538654 Q6ZTC4 211 aa6.04□□□□□ -1.44
SNHG1-209ENST00000538654 PRAC1Q96KF2 57 aa6.04□□□□□ -1.44
SNHG1-209ENST00000538654 A0A096LPF7 62 aa6.03□□□□□ -1.44
SNHG1-209ENST00000538654 MP68P56378 58 aa6.03□□□□□ -1.44
SNHG1-209ENST00000538654 HIGD2BQ4VC39 106 aa6.03□□□□□ -1.44
SNHG1-209ENST00000538654 MAP1AP78559 2803 aaPredicted RBP6.03□□□□□ -1.44
SNHG1-209ENST00000538654 CELA1Q9UNI1 258 aa6.02□□□□□ -1.45
SNHG1-209ENST00000538654 A0A1B0GW54 56 aa6.02□□□□□ -1.45
SNHG1-209ENST00000538654 VPS13CQ709C8 3753 aa6.01□□□□□ -1.45
SNHG1-209ENST00000538654 WNK1Q9H4A3 2382 aa6.01□□□□□ -1.45
SNHG1-209ENST00000538654 M0R378 163 aa6.01□□□□□ -1.45
SNHG1-209ENST00000538654 Q8N9L7 120 aa6.01□□□□□ -1.45
SNHG1-209ENST00000538654 HIGD2AQ9BW72 106 aa6.01□□□□□ -1.45
SNHG1-209ENST00000538654 KTN1-AS1Q86SY8 53 aa6□□□□□ -1.45
SNHG1-209ENST00000538654 PRR15Q8IV56 129 aa6□□□□□ -1.45
SNHG1-209ENST00000538654 DNAJC9-AS1A6NH13 148 aa6□□□□□ -1.45
SNHG1-209ENST00000538654 C6orf48Q9UBA6 75 aa6□□□□□ -1.45
SNHG1-209ENST00000538654 hDV103S1A0JD37 113 aa5.99□□□□□ -1.45
SNHG1-209ENST00000538654 Q1T7F1 81 aa5.99□□□□□ -1.45
SNHG1-209ENST00000538654 XAGE1AQ9HD64 81 aa5.99□□□□□ -1.45
SNHG1-209ENST00000538654 CHD6Q8TD26 2715 aa5.99□□□□□ -1.45
SNHG1-209ENST00000538654 LCE6AA0A183 80 aa5.99□□□□□ -1.45
SNHG1-209ENST00000538654 PRR34Q9NV39 138 aa5.99□□□□□ -1.45
SNHG1-209ENST00000538654 CELSR2Q9HCU4 2923 aa5.99□□□□□ -1.45
SNHG1-209ENST00000538654 MYO9AB2RTY4 2548 aa5.98□□□□□ -1.45
SNHG1-209ENST00000538654 LELP1Q5T871 98 aa5.98□□□□□ -1.45
SNHG1-209ENST00000538654 MXRA5Q9NR99 2828 aa5.98□□□□□ -1.45
SNHG1-209ENST00000538654 ANKRD17O75179 2603 aaKnown RBP5.98□□□□□ -1.45
SNHG1-209ENST00000538654 TLN2Q9Y4G6 2542 aa5.97□□□□□ -1.45
SNHG1-209ENST00000538654 EGFEM1PQ0D2K5 195 aa5.96□□□□□ -1.45
SNHG1-209ENST00000538654 DOPEY1Q5JWR5 2465 aa5.96□□□□□ -1.46
SNHG1-209ENST00000538654 C3orf84H3BNL1 204 aa5.95□□□□□ -1.46
SNHG1-209ENST00000538654 KLK12Q9UKR0 248 aa5.95□□□□□ -1.46
SNHG1-209ENST00000538654 USP9YO00507 2555 aaPredicted RBP5.95□□□□□ -1.46
SNHG1-209ENST00000538654 IGLV5-48A0A075B6I7 105 aa5.95□□□□□ -1.46
SNHG1-209ENST00000538654 IGHV6-1A0A0B4J1U7 121 aa5.95□□□□□ -1.46
SNHG1-209ENST00000538654 SMIM29Q86T20 159 aa5.95□□□□□ -1.46
SNHG1-209ENST00000538654 CAMK2N2Q96S95 79 aa5.95□□□□□ -1.46
SNHG1-209ENST00000538654 DEFB113Q30KQ7 82 aa5.95□□□□□ -1.46
SNHG1-209ENST00000538654 SETXQ7Z333 2677 aaKnown RBP5.94□□□□□ -1.46
SNHG1-209ENST00000538654 KPRPQ5T749 579 aaPredicted RBP5.94□□□□□ -1.46
SNHG1-209ENST00000538654 C1orf64Q8NEQ6 169 aa5.94□□□□□ -1.46
SNHG1-209ENST00000538654 ETDCA0A1B0GVM5 59 aa5.93□□□□□ -1.46
SNHG1-209ENST00000538654 JMJD1CQ15652 2540 aa5.93□□□□□ -1.46
SNHG1-209ENST00000538654 ZANQ9Y493 2812 aa5.93□□□□□ -1.46
SNHG1-209ENST00000538654 ZCCHC13Q8WW36 166 aaKnown RBP5.93□□□□□ -1.46
SNHG1-209ENST00000538654 Q6ZRP5 223 aa5.92□□□□□ -1.46
SNHG1-209ENST00000538654 CYP4F30PQ9H0H9 118 aa5.92□□□□□ -1.46
SNHG1-209ENST00000538654 USP9XQ93008 2570 aaPredicted RBP5.92□□□□□ -1.46
SNHG1-209ENST00000538654 NDUFB1O75438 58 aa5.92□□□□□ -1.46
SNHG1-209ENST00000538654 PRB1P04280 392 aa5.92□□□□□ -1.46
SNHG1-209ENST00000538654 LCE2BO14633 110 aa5.91□□□□□ -1.46
SNHG1-209ENST00000538654 Q8N377 158 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms