RNA–Protein interactions for RNA: ENST00000538439.1

NPIPB3-209, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 4

Gene NPIPB3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-209ENST00000538439 UBE2V1Q13404 147 aa6.59□□□□□ -1.35
NPIPB3-209ENST00000538439 WFDC2Q14508 124 aa6.59□□□□□ -1.35
NPIPB3-209ENST00000538439 KRTAP9-4Q9BYQ2 154 aa6.59□□□□□ -1.35
NPIPB3-209ENST00000538439 TP73-AS1Q9UF72 201 aa6.59□□□□□ -1.35
NPIPB3-209ENST00000538439 DYNC1H1Q14204 4646 aaKnown RBP6.59□□□□□ -1.35
NPIPB3-209ENST00000538439 PKHD1P08F94 4074 aa6.58□□□□□ -1.36
NPIPB3-209ENST00000538439 A0A087WTM6 91 aa6.58□□□□□ -1.36
NPIPB3-209ENST00000538439 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.58□□□□□ -1.36
NPIPB3-209ENST00000538439 LINC00158P58513 81 aa6.58□□□□□ -1.36
NPIPB3-209ENST00000538439 SRSF9Q13242 221 aaKnown RBP eCLIP6.58□□□□□ -1.36
NPIPB3-209ENST00000538439 Q6ZRU5 148 aa6.58□□□□□ -1.36
NPIPB3-209ENST00000538439 CARD19Q96LW7 228 aa6.58□□□□□ -1.36
NPIPB3-209ENST00000538439 ERG28Q9UKR5 140 aa6.58□□□□□ -1.36
NPIPB3-209ENST00000538439 PCP4L1A6NKN8 68 aa6.57□□□□□ -1.36
NPIPB3-209ENST00000538439 SMIM13P0DJ93 91 aa6.57□□□□□ -1.36
NPIPB3-209ENST00000538439 DDTP30046 118 aa6.57□□□□□ -1.36
NPIPB3-209ENST00000538439 PFN2P35080 140 aa6.57□□□□□ -1.36
NPIPB3-209ENST00000538439 COX17Q14061 63 aa6.57□□□□□ -1.36
NPIPB3-209ENST00000538439 C2orf91Q6ZV80 131 aa6.57□□□□□ -1.36
NPIPB3-209ENST00000538439 HIST1H4GQ99525 98 aa6.57□□□□□ -1.36
NPIPB3-209ENST00000538439 SPANXB1Q9NS25 103 aaPredicted RBP6.57□□□□□ -1.36
NPIPB3-209ENST00000538439 C6orf48Q9UBA6 75 aa6.57□□□□□ -1.36
NPIPB3-209ENST00000538439 HERC1Q15751 4861 aa6.56□□□□□ -1.36
NPIPB3-209ENST00000538439 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.56□□□□□ -1.36
NPIPB3-209ENST00000538439 A0A0U1RRA0 63 aa6.56□□□□□ -1.36
NPIPB3-209ENST00000538439 TAL2Q16559 108 aa6.56□□□□□ -1.36
NPIPB3-209ENST00000538439 Q6ZVH6 145 aa6.56□□□□□ -1.36
NPIPB3-209ENST00000538439 Q8N814 137 aa6.56□□□□□ -1.36
NPIPB3-209ENST00000538439 KRTAP9-3Q9BYQ3 159 aa6.56□□□□□ -1.36
NPIPB3-209ENST00000538439 FAT2Q9NYQ8 4349 aa6.56□□□□□ -1.36
NPIPB3-209ENST00000538439 RTL8CO15255 209 aa6.55□□□□□ -1.36
NPIPB3-209ENST00000538439 CNBPP62633 177 aaKnown RBP6.55□□□□□ -1.36
NPIPB3-209ENST00000538439 CTAG1AP78358 180 aa6.55□□□□□ -1.36
NPIPB3-209ENST00000538439 HSD52Q0P140 79 aa6.55□□□□□ -1.36
NPIPB3-209ENST00000538439 C9orf116Q5BN46 136 aaPredicted RBP6.55□□□□□ -1.36
NPIPB3-209ENST00000538439 PRR26Q8N8Z3 221 aa6.55□□□□□ -1.36
NPIPB3-209ENST00000538439 COPS9Q8WXC6 57 aa6.55□□□□□ -1.36
NPIPB3-209ENST00000538439 SPANXDQ9BXN6 97 aa6.55□□□□□ -1.36
NPIPB3-209ENST00000538439 SPANXCQ9NY87 97 aa6.55□□□□□ -1.36
NPIPB3-209ENST00000538439 IFITM1P13164 125 aa6.54□□□□□ -1.36
NPIPB3-209ENST00000538439 ADAMTSL4-AS1Q5T5F5 129 aa6.54□□□□□ -1.36
NPIPB3-209ENST00000538439 MIR7-3HGQ8N6C7 128 aa6.54□□□□□ -1.36
NPIPB3-209ENST00000538439 LITAFQ99732 161 aa6.54□□□□□ -1.36
NPIPB3-209ENST00000538439 KRTAP9-9Q9BYP9 154 aa6.54□□□□□ -1.36
NPIPB3-209ENST00000538439 PKIGQ9Y2B9 76 aa6.54□□□□□ -1.36
NPIPB3-209ENST00000538439 DNAH2Q9P225 4427 aa6.53□□□□□ -1.36
NPIPB3-209ENST00000538439 NDUFC2-KCTD14E9PQ53 114 aa6.53□□□□□ -1.36
NPIPB3-209ENST00000538439 LINC00336Q6ZUF6 198 aa6.53□□□□□ -1.36
NPIPB3-209ENST00000538439 DAND5Q8N907 189 aa6.53□□□□□ -1.36
NPIPB3-209ENST00000538439 DNAH17Q9UFH2 4485 aa6.52□□□□□ -1.36
NPIPB3-209ENST00000538439 DNAH6Q9C0G6 4158 aa6.52□□□□□ -1.37
NPIPB3-209ENST00000538439 LOC107984640A0A0U1RRK4 108 aa6.52□□□□□ -1.37
NPIPB3-209ENST00000538439 M0R143 59 aa6.52□□□□□ -1.37
NPIPB3-209ENST00000538439 TLX1NBP0CAT3 122 aa6.52□□□□□ -1.37
NPIPB3-209ENST00000538439 Q75L30 129 aa6.52□□□□□ -1.37
NPIPB3-209ENST00000538439 MUSTN1Q8IVN3 82 aa6.52□□□□□ -1.37
NPIPB3-209ENST00000538439 CEND1Q8N111 149 aa6.52□□□□□ -1.37
NPIPB3-209ENST00000538439 DNAH11Q96DT5 4516 aa6.51□□□□□ -1.37
NPIPB3-209ENST00000538439 NPC2P61916 151 aa6.51□□□□□ -1.37
NPIPB3-209ENST00000538439 RPL24P83731 157 aaKnown RBP6.51□□□□□ -1.37
NPIPB3-209ENST00000538439 RPL18AQ02543 176 aaKnown RBP6.51□□□□□ -1.37
NPIPB3-209ENST00000538439 C9orf163Q8N9P6 203 aa6.51□□□□□ -1.37
NPIPB3-209ENST00000538439 LINC00308Q8TCZ7 52 aa6.51□□□□□ -1.37
NPIPB3-209ENST00000538439 IGLV5-52A0A0A0MRZ9 124 aa6.5□□□□□ -1.37
NPIPB3-209ENST00000538439 HINT1P49773 126 aaPredicted RBP6.5□□□□□ -1.37
NPIPB3-209ENST00000538439 PPDPFQ9H3Y8 114 aa6.5□□□□□ -1.37
NPIPB3-209ENST00000538439 SND1-IT1Q9HBX3 110 aa6.5□□□□□ -1.37
NPIPB3-209ENST00000538439 Q6ZRP5 223 aa6.49□□□□□ -1.37
NPIPB3-209ENST00000538439 LOC107984156A0A0G2JMH3 177 aa6.48□□□□□ -1.37
NPIPB3-209ENST00000538439 BVES-AS1Q5T3Y7 98 aa6.48□□□□□ -1.37
NPIPB3-209ENST00000538439 ARL17AQ8IVW1 177 aa6.48□□□□□ -1.37
NPIPB3-209ENST00000538439 HSPG2P98160 4391 aa6.48□□□□□ -1.37
NPIPB3-209ENST00000538439 A4D1N5 150 aa6.47□□□□□ -1.37
NPIPB3-209ENST00000538439 C16orf90A8MZG2 172 aa6.47□□□□□ -1.37
NPIPB3-209ENST00000538439 BATFQ16520 125 aa6.47□□□□□ -1.37
NPIPB3-209ENST00000538439 SOSTDC1Q6X4U4 206 aa6.47□□□□□ -1.37
NPIPB3-209ENST00000538439 KRTAP4-5Q9BYR2 181 aa6.47□□□□□ -1.37
NPIPB3-209ENST00000538439 XAGE1AQ9HD64 81 aa6.47□□□□□ -1.37
NPIPB3-209ENST00000538439 PKD1P98161 4303 aa6.46□□□□□ -1.37
NPIPB3-209ENST00000538439 IGLV5-37A0A075B6J1 123 aa6.46□□□□□ -1.38
NPIPB3-209ENST00000538439 A6NDN8 102 aa6.46□□□□□ -1.38
NPIPB3-209ENST00000538439 FXYD2P54710 66 aa6.46□□□□□ -1.38
NPIPB3-209ENST00000538439 SDIM1Q6ZPB5 146 aa6.46□□□□□ -1.38
NPIPB3-209ENST00000538439 LINC00474Q9P2X8 69 aa6.46□□□□□ -1.38
NPIPB3-209ENST00000538439 NDUFC2O95298 119 aa6.45□□□□□ -1.38
NPIPB3-209ENST00000538439 A0A096LNI7 61 aa6.44□□□□□ -1.38
NPIPB3-209ENST00000538439 IGKV2-24A0A0C4DH68 120 aa6.44□□□□□ -1.38
NPIPB3-209ENST00000538439 FUSP35637 526 aaKnown RBP eCLIP6.44□□□□□ -1.38
NPIPB3-209ENST00000538439 LINC01620Q4KN68 170 aa6.44□□□□□ -1.38
NPIPB3-209ENST00000538439 C9orf129Q5T035 196 aaKnown RBP6.44□□□□□ -1.38
NPIPB3-209ENST00000538439 RAB37Q96AX2 223 aa6.44□□□□□ -1.38
NPIPB3-209ENST00000538439 DPH3Q96FX2 82 aa6.44□□□□□ -1.38
NPIPB3-209ENST00000538439 SNHG12Q9BXW3 62 aa6.44□□□□□ -1.38
NPIPB3-209ENST00000538439 NHP2Q9NX24 153 aaKnown RBP6.44□□□□□ -1.38
NPIPB3-209ENST00000538439 TRAV13-2A0A0B4J235 113 aa6.42□□□□□ -1.38
NPIPB3-209ENST00000538439 A0A0B4J2C4 111 aa6.42□□□□□ -1.38
NPIPB3-209ENST00000538439 CFC1BP0CG36 223 aa6.42□□□□□ -1.38
NPIPB3-209ENST00000538439 CFC1P0CG37 223 aa6.42□□□□□ -1.38
NPIPB3-209ENST00000538439 NKAPP1Q8N9T2 125 aa6.42□□□□□ -1.38
NPIPB3-209ENST00000538439 TRBV10-2A0A0K0K1G8 114 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms