RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 ZNF561-AS1K7EIQ3 104 aa4.48□□□□□ -1.69
USP28-206ENST00000538224 S100A7L2Q5SY68 101 aa4.48□□□□□ -1.69
USP28-206ENST00000538224 WFDC10BQ8IUB3 73 aa4.48□□□□□ -1.69
USP28-206ENST00000538224 C2orf48Q96LS8 159 aa4.48□□□□□ -1.69
USP28-206ENST00000538224 FAM218AQ96MZ4 157 aa4.48□□□□□ -1.69
USP28-206ENST00000538224 C1orf43Q9BWL3 253 aa4.48□□□□□ -1.69
USP28-206ENST00000538224 ORMDL1Q9P0S3 153 aa4.48□□□□□ -1.69
USP28-206ENST00000538224 GHRHP01286 108 aa4.47□□□□□ -1.69
USP28-206ENST00000538224 A0A087WYN8 130 aa4.46□□□□□ -1.7
USP28-206ENST00000538224 LECT2O14960 151 aa4.46□□□□□ -1.7
USP28-206ENST00000538224 DNAH10OSP0CZ25 163 aa4.46□□□□□ -1.7
USP28-206ENST00000538224 NANOS2P60321 138 aaKnown RBP4.46□□□□□ -1.7
USP28-206ENST00000538224 ESRGQ1W209 222 aa4.46□□□□□ -1.7
USP28-206ENST00000538224 UNQ6190/PRO20217Q6UXQ8 127 aa4.46□□□□□ -1.7
USP28-206ENST00000538224 RMI2Q96E14 147 aa4.46□□□□□ -1.7
USP28-206ENST00000538224 LINC00167Q96N53 147 aa4.46□□□□□ -1.7
USP28-206ENST00000538224 CAMK2N2Q96S95 79 aa4.46□□□□□ -1.7
USP28-206ENST00000538224 TM2D3Q9BRN9 247 aa4.46□□□□□ -1.7
USP28-206ENST00000538224 JMJD7-PLA2G4BH0Y9G9 81 aa4.45□□□□□ -1.7
USP28-206ENST00000538224 TMEM256-PLSCR3K7ERE1 68 aa4.45□□□□□ -1.7
USP28-206ENST00000538224 NCR3O14931 201 aa4.45□□□□□ -1.7
USP28-206ENST00000538224 C9orf116Q5BN46 136 aaPredicted RBP4.45□□□□□ -1.7
USP28-206ENST00000538224 C6orf223Q8N319 242 aa4.45□□□□□ -1.7
USP28-206ENST00000538224 Q9HAA7 133 aa4.45□□□□□ -1.7
USP28-206ENST00000538224 TRBV7-6A0A0J9YX20 115 aa4.44□□□□□ -1.7
USP28-206ENST00000538224 IGLV6-57P01721 117 aa4.44□□□□□ -1.7
USP28-206ENST00000538224 C10orf25Q5T742 122 aa4.44□□□□□ -1.7
USP28-206ENST00000538224 KRTAP26-1Q6PEX3 210 aa4.44□□□□□ -1.7
USP28-206ENST00000538224 Q8N814 137 aa4.44□□□□□ -1.7
USP28-206ENST00000538224 OBSCN-AS1Q96MR7 158 aa4.44□□□□□ -1.7
USP28-206ENST00000538224 IMUPQ9GZP8 106 aa4.44□□□□□ -1.7
USP28-206ENST00000538224 C6orf48Q9UBA6 75 aa4.44□□□□□ -1.7
USP28-206ENST00000538224 STAB1Q9NY15 2570 aa4.43□□□□□ -1.7
USP28-206ENST00000538224 IGKV2D-24A0A075B6R9 120 aa4.43□□□□□ -1.7
USP28-206ENST00000538224 TRAV23DV6A0A075B6W5 121 aa4.43□□□□□ -1.7
USP28-206ENST00000538224 TRBV7-7A0A0K0K1E9 115 aa4.43□□□□□ -1.7
USP28-206ENST00000538224 NDUFC2-KCTD14E9PQ53 114 aa4.43□□□□□ -1.7
USP28-206ENST00000538224 C6orf99Q4VX62 202 aa4.43□□□□□ -1.7
USP28-206ENST00000538224 FAM19A5Q7Z5A7 132 aaPredicted RBP4.43□□□□□ -1.7
USP28-206ENST00000538224 LINC00643Q86TS7 51 aa4.43□□□□□ -1.7
USP28-206ENST00000538224 C15orf56Q8N910 161 aa4.43□□□□□ -1.7
USP28-206ENST00000538224 DIRC1Q969H9 104 aa4.43□□□□□ -1.7
USP28-206ENST00000538224 DNAH3Q8TD57 4116 aa4.43□□□□□ -1.7
USP28-206ENST00000538224 hADV29S1A0JD25 119 aa4.42□□□□□ -1.7
USP28-206ENST00000538224 M0R378 163 aa4.42□□□□□ -1.7
USP28-206ENST00000538224 RPL18AQ02543 176 aaKnown RBP4.42□□□□□ -1.7
USP28-206ENST00000538224 HIGD2BQ4VC39 106 aa4.42□□□□□ -1.7
USP28-206ENST00000538224 GAGE2AQ6NT46 116 aa4.42□□□□□ -1.7
USP28-206ENST00000538224 LINC00575Q6W349 94 aa4.42□□□□□ -1.7
USP28-206ENST00000538224 UPK3BQ9BT76 320 aa4.42□□□□□ -1.7
USP28-206ENST00000538224 C22orf24Q9Y442 160 aa4.42□□□□□ -1.7
USP28-206ENST00000538224 PKD1L1Q8TDX9 2849 aa4.42□□□□□ -1.7
USP28-206ENST00000538224 TRRAPQ9Y4A5 3859 aa4.41□□□□□ -1.7
USP28-206ENST00000538224 K7EIL1 84 aa4.41□□□□□ -1.7
USP28-206ENST00000538224 TLX1NBP0CAT3 122 aa4.41□□□□□ -1.7
USP28-206ENST00000538224 VPREB1P12018 145 aa4.41□□□□□ -1.7
USP28-206ENST00000538224 PRR3P79522 188 aaKnown RBP4.41□□□□□ -1.7
USP28-206ENST00000538224 SYCNQ0VAF6 134 aa4.41□□□□□ -1.7
USP28-206ENST00000538224 SDIM1Q6ZPB5 146 aa4.41□□□□□ -1.7
USP28-206ENST00000538224 Q6ZRU5 148 aa4.41□□□□□ -1.7
USP28-206ENST00000538224 LINC00526Q96FQ7 95 aa4.41□□□□□ -1.7
USP28-206ENST00000538224 CMYA5Q8N3K9 4069 aa4.41□□□□□ -1.7
USP28-206ENST00000538224 FBN1P35555 2871 aaKnown RBP4.41□□□□□ -1.7
USP28-206ENST00000538224 UQCRQO14949 82 aa4.4□□□□□ -1.71
USP28-206ENST00000538224 C14orf132Q9NPU4 83 aa4.4□□□□□ -1.71
USP28-206ENST00000538224 PLA2G2DQ9UNK4 145 aa4.4□□□□□ -1.71
USP28-206ENST00000538224 TRBV10-3A0A0K0K1G6 114 aa4.39□□□□□ -1.71
USP28-206ENST00000538224 ZNF73O43830 326 aaPredicted RBP4.39□□□□□ -1.71
USP28-206ENST00000538224 CCKP06307 115 aa4.39□□□□□ -1.71
USP28-206ENST00000538224 PDE6GP18545 87 aa4.39□□□□□ -1.71
USP28-206ENST00000538224 COX7BP24311 80 aa4.39□□□□□ -1.71
USP28-206ENST00000538224 ELOF1P60002 83 aaKnown RBP4.39□□□□□ -1.71
USP28-206ENST00000538224 ATP5EP2Q5VTU8 51 aa4.39□□□□□ -1.71
USP28-206ENST00000538224 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.39□□□□□ -1.71
USP28-206ENST00000538224 C3orf22Q8N5N4 141 aa4.39□□□□□ -1.71
USP28-206ENST00000538224 NKAPP1Q8N9T2 125 aa4.39□□□□□ -1.71
USP28-206ENST00000538224 Q8NDZ9 215 aa4.39□□□□□ -1.71
USP28-206ENST00000538224 XAGE1AQ9HD64 81 aa4.39□□□□□ -1.71
USP28-206ENST00000538224 LINC00588Q9Y4M8 146 aa4.39□□□□□ -1.71
USP28-206ENST00000538224 TENM3Q9P273 2699 aa4.39□□□□□ -1.71
USP28-206ENST00000538224 SLPIP03973 132 aa4.38□□□□□ -1.71
USP28-206ENST00000538224 Q6JHZ5 121 aa4.38□□□□□ -1.71
USP28-206ENST00000538224 PRO0628Q9UI54 55 aa4.38□□□□□ -1.71
USP28-206ENST00000538224 LOC110117498A0A087WWA1 95 aa4.37□□□□□ -1.71
USP28-206ENST00000538224 SEC61GP60059 68 aa4.37□□□□□ -1.71
USP28-206ENST00000538224 C9orf153Q5TBE3 101 aa4.37□□□□□ -1.71
USP28-206ENST00000538224 PKIGQ9Y2B9 76 aa4.37□□□□□ -1.71
USP28-206ENST00000538224 ANK2Q01484 3957 aa4.37□□□□□ -1.71
USP28-206ENST00000538224 IGLV5-37A0A075B6J1 123 aa4.36□□□□□ -1.71
USP28-206ENST00000538224 USP17L23D6RBM5 183 aa4.36□□□□□ -1.71
USP28-206ENST00000538224 CRYGAP11844 174 aa4.36□□□□□ -1.71
USP28-206ENST00000538224 TMEM258P61165 79 aa4.36□□□□□ -1.71
USP28-206ENST00000538224 RBM3P98179 157 aaKnown RBP4.36□□□□□ -1.71
USP28-206ENST00000538224 Q6ZQY7 126 aa4.36□□□□□ -1.71
USP28-206ENST00000538224 Q6ZRP5 223 aa4.36□□□□□ -1.71
USP28-206ENST00000538224 SMCR5Q8TEV8 140 aa4.36□□□□□ -1.71
USP28-206ENST00000538224 LAMTOR3Q9UHA4 124 aa4.36□□□□□ -1.71
USP28-206ENST00000538224 COL6A5A8TX70 2615 aa4.35□□□□□ -1.71
USP28-206ENST00000538224 LOC107984640A0A0U1RRK4 108 aa4.35□□□□□ -1.71
USP28-206ENST00000538224 PRYO14603 147 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms