RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 VPREB1P12018 145 aa5.05□□□□□ -1.6
SPARC-208ENST00000538026 FABP4P15090 132 aa5.05□□□□□ -1.6
SPARC-208ENST00000538026 UBE2BP63146 152 aa5.05□□□□□ -1.6
SPARC-208ENST00000538026 MRPL55Q7Z7F7 128 aaKnown RBP5.05□□□□□ -1.6
SPARC-208ENST00000538026 PMCHL2Q9BQD1 86 aa5.05□□□□□ -1.6
SPARC-208ENST00000538026 GAGE10A6NGK3 116 aa5.04□□□□□ -1.6
SPARC-208ENST00000538026 H0Y9J4 135 aa5.04□□□□□ -1.6
SPARC-208ENST00000538026 KRTAP13-1Q8IUC0 172 aa5.04□□□□□ -1.6
SPARC-208ENST00000538026 MUC17Q685J3 4493 aa5.03□□□□□ -1.6
SPARC-208ENST00000538026 TMEM238LA0A1B0GVL6 79 aa5.03□□□□□ -1.6
SPARC-208ENST00000538026 H0Y8G0 127 aa5.03□□□□□ -1.6
SPARC-208ENST00000538026 ZNF861PO60384 105 aa5.03□□□□□ -1.6
SPARC-208ENST00000538026 COX17Q14061 63 aa5.03□□□□□ -1.6
SPARC-208ENST00000538026 LBHQ53QV2 105 aaPredicted RBP5.03□□□□□ -1.6
SPARC-208ENST00000538026 REG3GQ6UW15 175 aa5.03□□□□□ -1.6
SPARC-208ENST00000538026 PRR26Q8N8Z3 221 aa5.03□□□□□ -1.6
SPARC-208ENST00000538026 MUC2Q02817 5179 aa5.03□□□□□ -1.6
SPARC-208ENST00000538026 A0A0U1RRA0 63 aa5.02□□□□□ -1.61
SPARC-208ENST00000538026 BCE1O60756 84 aa5.02□□□□□ -1.61
SPARC-208ENST00000538026 SMIM13P0DJ93 91 aa5.02□□□□□ -1.61
SPARC-208ENST00000538026 DIRC1Q969H9 104 aa5.02□□□□□ -1.61
SPARC-208ENST00000538026 IGLV1-50A0A075B6I6 118 aa5.01□□□□□ -1.61
SPARC-208ENST00000538026 COA6Q5JTJ3 125 aaKnown RBP5.01□□□□□ -1.61
SPARC-208ENST00000538026 HSPB8Q9UJY1 196 aa5.01□□□□□ -1.61
SPARC-208ENST00000538026 IGKV2-28A0A075B6P5 120 aa5□□□□□ -1.61
SPARC-208ENST00000538026 TMEM238C9JI98 176 aa5□□□□□ -1.61
SPARC-208ENST00000538026 EIF4EBP3O60516 100 aaPredicted RBP5□□□□□ -1.61
SPARC-208ENST00000538026 DPM2O94777 84 aa5□□□□□ -1.61
SPARC-208ENST00000538026 IGKV2D-28P01615 120 aa5□□□□□ -1.61
SPARC-208ENST00000538026 LINC00158P58513 81 aa5□□□□□ -1.61
SPARC-208ENST00000538026 NDUFA12Q9UI09 145 aa5□□□□□ -1.61
SPARC-208ENST00000538026 SYS1-DBNDD2H3BUS1 97 aa4.99□□□□□ -1.61
SPARC-208ENST00000538026 M0R378 163 aa4.99□□□□□ -1.61
SPARC-208ENST00000538026 LEPROTO15243 131 aa4.99□□□□□ -1.61
SPARC-208ENST00000538026 IGKCP01834 107 aa4.99□□□□□ -1.61
SPARC-208ENST00000538026 SFTA2Q6UW10 78 aa4.99□□□□□ -1.61
SPARC-208ENST00000538026 MIR7-3HGQ8N6C7 128 aa4.99□□□□□ -1.61
SPARC-208ENST00000538026 ANAPC11Q9NYG5 84 aa4.99□□□□□ -1.61
SPARC-208ENST00000538026 A0A087X002 238 aa4.98□□□□□ -1.61
SPARC-208ENST00000538026 J3QQQ9 107 aa4.98□□□□□ -1.61
SPARC-208ENST00000538026 PLNP26678 52 aa4.98□□□□□ -1.61
SPARC-208ENST00000538026 DAND5Q8N907 189 aa4.98□□□□□ -1.61
SPARC-208ENST00000538026 NKAPP1Q8N9T2 125 aa4.98□□□□□ -1.61
SPARC-208ENST00000538026 MAP1LC3CQ9BXW4 147 aa4.98□□□□□ -1.61
SPARC-208ENST00000538026 LOC107984156A0A0G2JMH3 177 aa4.97□□□□□ -1.61
SPARC-208ENST00000538026 C3orf79P0CE67 100 aa4.97□□□□□ -1.61
SPARC-208ENST00000538026 HERV-K104P63124 156 aa4.97□□□□□ -1.61
SPARC-208ENST00000538026 ADAMTSL4-AS1Q5T5F5 129 aa4.97□□□□□ -1.61
SPARC-208ENST00000538026 LINC01545Q5VT33 79 aa4.97□□□□□ -1.61
SPARC-208ENST00000538026 SOSTDC1Q6X4U4 206 aa4.97□□□□□ -1.61
SPARC-208ENST00000538026 ARL17AQ8IVW1 177 aa4.97□□□□□ -1.61
SPARC-208ENST00000538026 TMEM126AQ9H061 195 aa4.97□□□□□ -1.61
SPARC-208ENST00000538026 IGKV2D-26A0A0A0MRZ7 120 aa4.96□□□□□ -1.62
SPARC-208ENST00000538026 MYMXA0A1B0GTQ4 84 aa4.96□□□□□ -1.62
SPARC-208ENST00000538026 E9PLD3 99 aa4.96□□□□□ -1.62
SPARC-208ENST00000538026 KRTAP4-16G5E9R7 235 aaPredicted RBP4.96□□□□□ -1.62
SPARC-208ENST00000538026 PRLHP81277 87 aa4.96□□□□□ -1.62
SPARC-208ENST00000538026 RPL24P83731 157 aaKnown RBP4.96□□□□□ -1.62
SPARC-208ENST00000538026 KRTAP13-2Q52LG2 175 aa4.96□□□□□ -1.62
SPARC-208ENST00000538026 BOD1L2Q8IYS8 172 aa4.96□□□□□ -1.62
SPARC-208ENST00000538026 PLEKHB2Q96CS7 222 aa4.96□□□□□ -1.62
SPARC-208ENST00000538026 A0A0J9YXY3 114 aa4.95□□□□□ -1.62
SPARC-208ENST00000538026 SPRR1AP35321 89 aa4.95□□□□□ -1.62
SPARC-208ENST00000538026 RPL28P46779 137 aaKnown RBP4.95□□□□□ -1.62
SPARC-208ENST00000538026 MEIG1Q5JSS6 88 aa4.95□□□□□ -1.62
SPARC-208ENST00000538026 LITAFQ99732 161 aa4.95□□□□□ -1.62
SPARC-208ENST00000538026 TTTY13Q9BZ97 58 aa4.95□□□□□ -1.62
SPARC-208ENST00000538026 NCR3O14931 201 aa4.94□□□□□ -1.62
SPARC-208ENST00000538026 ATP6V1G1O75348 118 aa4.94□□□□□ -1.62
SPARC-208ENST00000538026 PET117Q6UWS5 81 aa4.94□□□□□ -1.62
SPARC-208ENST00000538026 TRBV10-3A0A0K0K1G6 114 aa4.93□□□□□ -1.62
SPARC-208ENST00000538026 NMUP48645 174 aa4.93□□□□□ -1.62
SPARC-208ENST00000538026 UBE2AP49459 152 aa4.93□□□□□ -1.62
SPARC-208ENST00000538026 FAM19A1Q7Z5A9 133 aa4.93□□□□□ -1.62
SPARC-208ENST00000538026 KCNQ1DNQ9H478 68 aa4.93□□□□□ -1.62
SPARC-208ENST00000538026 LGALS3P17931 250 aaKnown RBP4.92□□□□□ -1.62
SPARC-208ENST00000538026 HERVK_113P61574 105 aa4.92□□□□□ -1.62
SPARC-208ENST00000538026 ANKRD39Q53RE8 183 aa4.92□□□□□ -1.62
SPARC-208ENST00000538026 LINC00587B1AMM8 73 aa4.91□□□□□ -1.62
SPARC-208ENST00000538026 GHRHP01286 108 aa4.91□□□□□ -1.62
SPARC-208ENST00000538026 KRTDAPP60985 99 aa4.91□□□□□ -1.62
SPARC-208ENST00000538026 NPC2P61916 151 aa4.91□□□□□ -1.62
SPARC-208ENST00000538026 TRBV10-2A0A0K0K1G8 114 aa4.9□□□□□ -1.63
SPARC-208ENST00000538026 PRYO14603 147 aa4.9□□□□□ -1.63
SPARC-208ENST00000538026 ERC2-IT1O76042 136 aa4.9□□□□□ -1.63
SPARC-208ENST00000538026 IGLV6-57P01721 117 aa4.9□□□□□ -1.63
SPARC-208ENST00000538026 S100A1P23297 94 aa4.9□□□□□ -1.63
SPARC-208ENST00000538026 ATOH7Q8N100 152 aa4.9□□□□□ -1.63
SPARC-208ENST00000538026 HIST3H2BBQ8N257 126 aa4.9□□□□□ -1.63
SPARC-208ENST00000538026 LINC00337Q8N6G1 96 aa4.9□□□□□ -1.63
SPARC-208ENST00000538026 SMCR5Q8TEV8 140 aa4.9□□□□□ -1.63
SPARC-208ENST00000538026 B5MCH6 92 aa4.89□□□□□ -1.63
SPARC-208ENST00000538026 NDUFC2O95298 119 aa4.89□□□□□ -1.63
SPARC-208ENST00000538026 CRYGAP11844 174 aa4.89□□□□□ -1.63
SPARC-208ENST00000538026 RPL13AP40429 203 aaKnown RBP4.89□□□□□ -1.63
SPARC-208ENST00000538026 FAM229BQ4G0N7 80 aa4.89□□□□□ -1.63
SPARC-208ENST00000538026 C3orf22Q8N5N4 141 aa4.89□□□□□ -1.63
SPARC-208ENST00000538026 LINC00308Q8TCZ7 52 aa4.89□□□□□ -1.63
SPARC-208ENST00000538026 SPRR4Q96PI1 79 aa4.89□□□□□ -1.63
SPARC-208ENST00000538026 HIST1H2BLQ99880 126 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms