RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 ACYP1P07311 99 aa10.45□□□□□ -0.74
MKS1-204ENST00000537529 DNAH10OSP0CZ25 163 aa10.45□□□□□ -0.74
MKS1-204ENST00000537529 C15orf56Q8N910 161 aa10.45□□□□□ -0.74
MKS1-204ENST00000537529 C2orf48Q96LS8 159 aa10.45□□□□□ -0.74
MKS1-204ENST00000537529 MRAPQ8TCY5 172 aa10.44□□□□□ -0.74
MKS1-204ENST00000537529 IGKV2D-24A0A075B6R9 120 aa10.43□□□□□ -0.74
MKS1-204ENST00000537529 ORMDL1Q9P0S3 153 aa10.43□□□□□ -0.74
MKS1-204ENST00000537529 F8WDY8 70 aa10.43□□□□□ -0.74
MKS1-204ENST00000537529 LINC00167Q96N53 147 aa10.42□□□□□ -0.74
MKS1-204ENST00000537529 MAST4O15021 2626 aa10.42□□□□□ -0.74
MKS1-204ENST00000537529 C6orf99Q4VX62 202 aa10.42□□□□□ -0.74
MKS1-204ENST00000537529 IGLV6-57P01721 117 aa10.41□□□□□ -0.74
MKS1-204ENST00000537529 RPL18AQ02543 176 aaKnown RBP10.41□□□□□ -0.74
MKS1-204ENST00000537529 Q6ZRU5 148 aa10.41□□□□□ -0.74
MKS1-204ENST00000537529 Q8N814 137 aa10.41□□□□□ -0.74
MKS1-204ENST00000537529 BAHCC1Q9P281 2608 aa10.41□□□□□ -0.74
MKS1-204ENST00000537529 SLPIP03973 132 aa10.4□□□□□ -0.74
MKS1-204ENST00000537529 XAGE1AQ9HD64 81 aa10.4□□□□□ -0.74
MKS1-204ENST00000537529 CMYA5Q8N3K9 4069 aa10.4□□□□□ -0.74
MKS1-204ENST00000537529 DNAH3Q8TD57 4116 aa10.39□□□□□ -0.75
MKS1-204ENST00000537529 PKD1L1Q8TDX9 2849 aa10.39□□□□□ -0.75
MKS1-204ENST00000537529 LINC00588Q9Y4M8 146 aa10.39□□□□□ -0.75
MKS1-204ENST00000537529 OBSCN-AS1Q96MR7 158 aa10.38□□□□□ -0.75
MKS1-204ENST00000537529 TENM3Q9P273 2699 aa10.38□□□□□ -0.75
MKS1-204ENST00000537529 NDUFC2-KCTD14E9PQ53 114 aa10.37□□□□□ -0.75
MKS1-204ENST00000537529 TTC32Q5I0X7 151 aa10.37□□□□□ -0.75
MKS1-204ENST00000537529 GAGE2BQ13066 116 aa10.37□□□□□ -0.75
MKS1-204ENST00000537529 GAGE2EQ4V326 116 aa10.37□□□□□ -0.75
MKS1-204ENST00000537529 LINC00575Q6W349 94 aa10.37□□□□□ -0.75
MKS1-204ENST00000537529 GAGE2DQ9UEU5 116 aa10.37□□□□□ -0.75
MKS1-204ENST00000537529 GAGE2AQ6NT46 116 aa10.36□□□□□ -0.75
MKS1-204ENST00000537529 TRBV10-3A0A0K0K1G6 114 aa10.35□□□□□ -0.75
MKS1-204ENST00000537529 SYCNQ0VAF6 134 aa10.35□□□□□ -0.75
MKS1-204ENST00000537529 TRAV23DV6A0A075B6W5 121 aa10.35□□□□□ -0.75
MKS1-204ENST00000537529 VPREB1P12018 145 aa10.35□□□□□ -0.75
MKS1-204ENST00000537529 Q6Q795 121 aa10.35□□□□□ -0.75
MKS1-204ENST00000537529 C14orf132Q9NPU4 83 aa10.35□□□□□ -0.75
MKS1-204ENST00000537529 TMEM256-PLSCR3K7ERE1 68 aa10.34□□□□□ -0.75
MKS1-204ENST00000537529 C9orf129Q5T035 196 aaKnown RBP10.34□□□□□ -0.75
MKS1-204ENST00000537529 RMI2Q96E14 147 aa10.34□□□□□ -0.75
MKS1-204ENST00000537529 DIRC1Q969H9 104 aa10.34□□□□□ -0.75
MKS1-204ENST00000537529 A0A1B0GV72 72 aa10.32□□□□□ -0.76
MKS1-204ENST00000537529 hADV29S1A0JD25 119 aa10.32□□□□□ -0.76
MKS1-204ENST00000537529 M0R378 163 aa10.32□□□□□ -0.76
MKS1-204ENST00000537529 UPK3BQ9BT76 320 aa10.32□□□□□ -0.76
MKS1-204ENST00000537529 JMJD7-PLA2G4BH0Y9G9 81 aa10.31□□□□□ -0.76
MKS1-204ENST00000537529 COL6A5A8TX70 2615 aa10.31□□□□□ -0.76
MKS1-204ENST00000537529 LINC00643Q86TS7 51 aa10.3□□□□□ -0.76
MKS1-204ENST00000537529 ZNF73O43830 326 aaPredicted RBP10.3□□□□□ -0.76
MKS1-204ENST00000537529 SDIM1Q6ZPB5 146 aa10.3□□□□□ -0.76
MKS1-204ENST00000537529 Q6ZRP5 223 aa10.3□□□□□ -0.76
MKS1-204ENST00000537529 SMCR5Q8TEV8 140 aa10.3□□□□□ -0.76
MKS1-204ENST00000537529 TRBV7-7A0A0K0K1E9 115 aa10.29□□□□□ -0.76
MKS1-204ENST00000537529 TRBV7-6A0A0J9YX20 115 aa10.29□□□□□ -0.76
MKS1-204ENST00000537529 NOTCH1P46531 2555 aa10.28□□□□□ -0.76
MKS1-204ENST00000537529 USP17L23D6RBM5 183 aa10.28□□□□□ -0.76
MKS1-204ENST00000537529 COX7BP24311 80 aa10.28□□□□□ -0.76
MKS1-204ENST00000537529 ANK2Q01484 3957 aa10.27□□□□□ -0.76
MKS1-204ENST00000537529 H3BQ85 93 aa10.27□□□□□ -0.76
MKS1-204ENST00000537529 TLX1NBP0CAT3 122 aa10.26□□□□□ -0.77
MKS1-204ENST00000537529 ELOF1P60002 83 aaKnown RBP10.26□□□□□ -0.77
MKS1-204ENST00000537529 CCKP06307 115 aa10.25□□□□□ -0.77
MKS1-204ENST00000537529 ANAPC13Q9BS18 74 aa10.25□□□□□ -0.77
MKS1-204ENST00000537529 IMUPQ9GZP8 106 aa10.25□□□□□ -0.77
MKS1-204ENST00000537529 CASC10Q5T4H9 136 aa10.24□□□□□ -0.77
MKS1-204ENST00000537529 MDFIQ99750 246 aa10.24□□□□□ -0.77
MKS1-204ENST00000537529 NDUFV3P56181 108 aaKnown RBP10.24□□□□□ -0.77
MKS1-204ENST00000537529 Q6ZQY7 126 aa10.24□□□□□ -0.77
MKS1-204ENST00000537529 NKAPP1Q8N9T2 125 aa10.24□□□□□ -0.77
MKS1-204ENST00000537529 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.22□□□□□ -0.77
MKS1-204ENST00000537529 GHRHP01286 108 aa10.22□□□□□ -0.77
MKS1-204ENST00000537529 B9D2Q9BPU9 175 aa10.21□□□□□ -0.77
MKS1-204ENST00000537529 PLA2G2DQ9UNK4 145 aa10.21□□□□□ -0.77
MKS1-204ENST00000537529 LAMTOR3Q9UHA4 124 aa10.21□□□□□ -0.78
MKS1-204ENST00000537529 LINC00846Q9NV44 126 aa10.2□□□□□ -0.78
MKS1-204ENST00000537529 NBEAL1Q6ZS30 2694 aa10.2□□□□□ -0.78
MKS1-204ENST00000537529 SERTAD4-AS1Q5TG53 156 aa10.19□□□□□ -0.78
MKS1-204ENST00000537529 RBM3P98179 157 aaKnown RBP10.19□□□□□ -0.78
MKS1-204ENST00000537529 HUWE1Q7Z6Z7 4374 aaKnown RBP10.18□□□□□ -0.78
MKS1-204ENST00000537529 UBE2DNLQ8IWF7 75 aa10.18□□□□□ -0.78
MKS1-204ENST00000537529 LINC00528Q8N1L1 170 aa10.18□□□□□ -0.78
MKS1-204ENST00000537529 C7orf33Q8WU49 177 aa10.18□□□□□ -0.78
MKS1-204ENST00000537529 Q6JHZ5 121 aa10.18□□□□□ -0.78
MKS1-204ENST00000537529 KCNQ1DNQ9H478 68 aa10.18□□□□□ -0.78
MKS1-204ENST00000537529 IGLV5-37A0A075B6J1 123 aa10.17□□□□□ -0.78
MKS1-204ENST00000537529 LOC110117498A0A087WWA1 95 aa10.17□□□□□ -0.78
MKS1-204ENST00000537529 APLNQ9ULZ1 77 aa10.17□□□□□ -0.78
MKS1-204ENST00000537529 LOC107984640A0A0U1RRK4 108 aa10.15□□□□□ -0.78
MKS1-204ENST00000537529 NHLRC4P0CG21 123 aaPredicted RBP10.15□□□□□ -0.78
MKS1-204ENST00000537529 Q6ZQT0 140 aa10.15□□□□□ -0.78
MKS1-204ENST00000537529 PDE6GP18545 87 aa10.14□□□□□ -0.79
MKS1-204ENST00000537529 DSCR8Q96T75 97 aa10.14□□□□□ -0.79
MKS1-204ENST00000537529 KRTAP1-5Q9BYS1 174 aa10.14□□□□□ -0.79
MKS1-204ENST00000537529 MGAM2Q2M2H8 2515 aa10.13□□□□□ -0.79
MKS1-204ENST00000537529 FAM236AA0A1B0GUQ0 79 aa10.13□□□□□ -0.79
MKS1-204ENST00000537529 FAM236BA0A1B0GV22 79 aa10.13□□□□□ -0.79
MKS1-204ENST00000537529 PRYO14603 147 aa10.12□□□□□ -0.79
MKS1-204ENST00000537529 FAM168BA1KXE4 195 aa10.11□□□□□ -0.79
MKS1-204ENST00000537529 PSCAO43653 123 aa10.11□□□□□ -0.79
MKS1-204ENST00000537529 IGKV3D-7A0A0C4DH55 119 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms