RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 NIT1Q86X76 327 aa3.65□□□□□ -1.83
CCDC60-203ENST00000536742 SLC25A29Q8N8R3 303 aa3.65□□□□□ -1.83
CCDC60-203ENST00000536742 C20orf203Q8NBC4 194 aa3.65□□□□□ -1.83
CCDC60-203ENST00000536742 HIST1H2BHQ93079 126 aa3.65□□□□□ -1.83
CCDC60-203ENST00000536742 HIST1H2BNQ99877 126 aa3.65□□□□□ -1.83
CCDC60-203ENST00000536742 HIST1H2BMQ99879 126 aa3.65□□□□□ -1.83
CCDC60-203ENST00000536742 SMIM2Q9BVW6 85 aa3.65□□□□□ -1.83
CCDC60-203ENST00000536742 MUC12Q9UKN1 5478 aa3.65□□□□□ -1.83
CCDC60-203ENST00000536742 TRBV25-1A0A075B6N4 114 aa3.64□□□□□ -1.83
CCDC60-203ENST00000536742 TRBV27A0A0K0K1C4 114 aa3.64□□□□□ -1.83
CCDC60-203ENST00000536742 SMKR1H3BMG3 65 aa3.64□□□□□ -1.83
CCDC60-203ENST00000536742 NPYP01303 97 aa3.64□□□□□ -1.83
CCDC60-203ENST00000536742 IFI27P40305 119 aaPredicted RBP3.64□□□□□ -1.83
CCDC60-203ENST00000536742 Q6ZVH6 145 aa3.64□□□□□ -1.83
CCDC60-203ENST00000536742 C18orf32Q8TCD1 76 aa3.64□□□□□ -1.83
CCDC60-203ENST00000536742 DIRC1Q969H9 104 aa3.64□□□□□ -1.83
CCDC60-203ENST00000536742 RPL39LQ96EH5 51 aaKnown RBP3.64□□□□□ -1.83
CCDC60-203ENST00000536742 HSPB8Q9UJY1 196 aa3.64□□□□□ -1.83
CCDC60-203ENST00000536742 IGHV1-24A0A0C4DH33 117 aa3.63□□□□□ -1.83
CCDC60-203ENST00000536742 ATP5LO75964 103 aa3.63□□□□□ -1.83
CCDC60-203ENST00000536742 POLR2KP53803 58 aaKnown RBP3.63□□□□□ -1.83
CCDC60-203ENST00000536742 UBE2D3P61077 147 aa3.63□□□□□ -1.83
CCDC60-203ENST00000536742 UBE2D2P62837 147 aa3.63□□□□□ -1.83
CCDC60-203ENST00000536742 COA6Q5JTJ3 125 aaKnown RBP3.63□□□□□ -1.83
CCDC60-203ENST00000536742 AMMECR1LQ6DCA0 310 aa3.63□□□□□ -1.83
CCDC60-203ENST00000536742 Q6ZN92 141 aa3.63□□□□□ -1.83
CCDC60-203ENST00000536742 PACRGQ96M98 296 aaPredicted RBP3.63□□□□□ -1.83
CCDC60-203ENST00000536742 TMEM243Q9BU79 118 aa3.63□□□□□ -1.83
CCDC60-203ENST00000536742 GTSF1LQ9H1H1 148 aa3.63□□□□□ -1.83
CCDC60-203ENST00000536742 CYSLTR1Q9Y271 337 aa3.63□□□□□ -1.83
CCDC60-203ENST00000536742 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.62□□□□□ -1.83
CCDC60-203ENST00000536742 C20orf202A1L168 122 aa3.62□□□□□ -1.83
CCDC60-203ENST00000536742 TMEM262E9PQX1 116 aa3.62□□□□□ -1.83
CCDC60-203ENST00000536742 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.62□□□□□ -1.83
CCDC60-203ENST00000536742 LEPROTL1O95214 131 aa3.62□□□□□ -1.83
CCDC60-203ENST00000536742 HBDP02042 147 aa3.62□□□□□ -1.83
CCDC60-203ENST00000536742 IQCJQ1A5X6 159 aa3.62□□□□□ -1.83
CCDC60-203ENST00000536742 Q8N9L7 120 aa3.62□□□□□ -1.83
CCDC60-203ENST00000536742 SCGB3A1Q96QR1 104 aa3.62□□□□□ -1.83
CCDC60-203ENST00000536742 KMT2DO14686 5537 aa3.61□□□□□ -1.83
CCDC60-203ENST00000536742 A0A087WX48 190 aa3.61□□□□□ -1.83
CCDC60-203ENST00000536742 TRBV6-8A0A0A6YYG3 113 aa3.61□□□□□ -1.83
CCDC60-203ENST00000536742 ESDP10768 282 aa3.61□□□□□ -1.83
CCDC60-203ENST00000536742 ZNF25P17030 456 aaPredicted RBP3.61□□□□□ -1.83
CCDC60-203ENST00000536742 MAJINQ3KP22 176 aa3.61□□□□□ -1.83
CCDC60-203ENST00000536742 LINC00337Q8N6G1 96 aa3.61□□□□□ -1.83
CCDC60-203ENST00000536742 TMEM141Q96I45 108 aa3.61□□□□□ -1.83
CCDC60-203ENST00000536742 C2orf88Q9BSF0 95 aa3.61□□□□□ -1.83
CCDC60-203ENST00000536742 MAP1LC3CQ9BXW4 147 aa3.61□□□□□ -1.83
CCDC60-203ENST00000536742 SPANXA1Q9NS26 97 aa3.61□□□□□ -1.83
CCDC60-203ENST00000536742 LINC01546A6NGU7 62 aa3.6□□□□□ -1.83
CCDC60-203ENST00000536742 FABP4P15090 132 aa3.6□□□□□ -1.83
CCDC60-203ENST00000536742 OR5A1Q8NGJ0 315 aa3.6□□□□□ -1.83
CCDC60-203ENST00000536742 TOMM6Q96B49 74 aa3.6□□□□□ -1.83
CCDC60-203ENST00000536742 CHCHD7Q9BUK0 85 aa3.6□□□□□ -1.83
CCDC60-203ENST00000536742 TIMM21Q9BVV7 248 aa3.6□□□□□ -1.83
CCDC60-203ENST00000536742 VCX2Q9H322 139 aa3.6□□□□□ -1.83
CCDC60-203ENST00000536742 CCL25O15444 150 aa3.59□□□□□ -1.83
CCDC60-203ENST00000536742 SEC11AP67812 179 aa3.59□□□□□ -1.83
CCDC60-203ENST00000536742 PDZD11Q5EBL8 140 aa3.59□□□□□ -1.83
CCDC60-203ENST00000536742 FAM19A2Q8N3H0 131 aa3.59□□□□□ -1.83
CCDC60-203ENST00000536742 UBE2WQ96B02 151 aa3.59□□□□□ -1.83
CCDC60-203ENST00000536742 IFI27L1Q96BM0 104 aa3.59□□□□□ -1.83
CCDC60-203ENST00000536742 TIMM17AQ99595 171 aa3.59□□□□□ -1.83
CCDC60-203ENST00000536742 RETNLBQ9BQ08 111 aa3.59□□□□□ -1.83
CCDC60-203ENST00000536742 PRO0461Q9UI25 63 aa3.59□□□□□ -1.83
CCDC60-203ENST00000536742 CSDC2Q9Y534 153 aaKnown RBP3.59□□□□□ -1.83
CCDC60-203ENST00000536742 HSBP1L1C9JCN9 74 aa3.58□□□□□ -1.84
CCDC60-203ENST00000536742 CRPP02741 224 aa3.58□□□□□ -1.84
CCDC60-203ENST00000536742 LINC00694P0DN24 101 aa3.58□□□□□ -1.84
CCDC60-203ENST00000536742 FGF6P10767 208 aa3.58□□□□□ -1.84
CCDC60-203ENST00000536742 KRTDAPP60985 99 aa3.58□□□□□ -1.84
CCDC60-203ENST00000536742 TEX43Q6ZNM6 134 aa3.58□□□□□ -1.84
CCDC60-203ENST00000536742 MRPL52Q86TS9 123 aaKnown RBP3.58□□□□□ -1.84
CCDC60-203ENST00000536742 HIST3H2BBQ8N257 126 aa3.58□□□□□ -1.84
CCDC60-203ENST00000536742 KLK12Q9UKR0 248 aa3.58□□□□□ -1.84
CCDC60-203ENST00000536742 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.57□□□□□ -1.84
CCDC60-203ENST00000536742 LOC105371267A0A1B0GV96 52 aa3.57□□□□□ -1.84
CCDC60-203ENST00000536742 IGKV2-29A2NJV5 120 aaPredicted RBP3.57□□□□□ -1.84
CCDC60-203ENST00000536742 ANGP03950 147 aaKnown RBP3.57□□□□□ -1.84
CCDC60-203ENST00000536742 S100A12P80511 92 aa3.57□□□□□ -1.84
CCDC60-203ENST00000536742 MRPS36P82909 103 aaKnown RBP3.57□□□□□ -1.84
CCDC60-203ENST00000536742 PMVKQ15126 192 aa3.57□□□□□ -1.84
CCDC60-203ENST00000536742 SS18Q15532 418 aa3.57□□□□□ -1.84
CCDC60-203ENST00000536742 PMCHL1Q16048 86 aa3.57□□□□□ -1.84
CCDC60-203ENST00000536742 KRTAP19-6Q3LI70 58 aa3.57□□□□□ -1.84
CCDC60-203ENST00000536742 OR10D4PQ8NGN7 298 aa3.57□□□□□ -1.84
CCDC60-203ENST00000536742 HIST1H2BLQ99880 126 aa3.57□□□□□ -1.84
CCDC60-203ENST00000536742 GEMIN7Q9H840 131 aaKnown RBP3.57□□□□□ -1.84
CCDC60-203ENST00000536742 TRAV12-1A0A0B4J245 112 aa3.56□□□□□ -1.84
CCDC60-203ENST00000536742 TRAV8-4A0A0B4J246 113 aa3.56□□□□□ -1.84
CCDC60-203ENST00000536742 H0Y8G0 127 aa3.56□□□□□ -1.84
CCDC60-203ENST00000536742 H3BRM9 83 aa3.56□□□□□ -1.84
CCDC60-203ENST00000536742 SYS1-DBNDD2H3BUS1 97 aa3.56□□□□□ -1.84
CCDC60-203ENST00000536742 NUPR1O60356 82 aa3.56□□□□□ -1.84
CCDC60-203ENST00000536742 PLNP26678 52 aa3.56□□□□□ -1.84
CCDC60-203ENST00000536742 RPL39P62891 51 aaKnown RBP3.56□□□□□ -1.84
CCDC60-203ENST00000536742 LINC00173Q6ZV60 143 aa3.56□□□□□ -1.84
CCDC60-203ENST00000536742 LINC00474Q9P2X8 69 aa3.56□□□□□ -1.84
CCDC60-203ENST00000536742 UBE2D4Q9Y2X8 147 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms