RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 KAAG1Q9UBP8 84 aa0.89□□□□□ -2.27
PRKDC-208ENST00000536710 SACSQ9NZJ4 4579 aa0.89□□□□□ -2.27
PRKDC-208ENST00000536710 HUWE1Q7Z6Z7 4374 aaKnown RBP0.89□□□□□ -2.27
PRKDC-208ENST00000536710 BIRC6Q9NR09 4857 aa0.89□□□□□ -2.27
PRKDC-208ENST00000536710 STAB2Q8WWQ8 2551 aa0.89□□□□□ -2.27
PRKDC-208ENST00000536710 KMT2AQ03164 3969 aa0.89□□□□□ -2.27
PRKDC-208ENST00000536710 UQCRHLA0A096LP55 91 aa0.88□□□□□ -2.27
PRKDC-208ENST00000536710 FAM236AA0A1B0GUQ0 79 aa0.88□□□□□ -2.27
PRKDC-208ENST00000536710 FAM236BA0A1B0GV22 79 aa0.88□□□□□ -2.27
PRKDC-208ENST00000536710 CLPSL1A2RUU4 121 aa0.88□□□□□ -2.27
PRKDC-208ENST00000536710 CPSF4LA6NMK7 179 aaKnown RBP0.88□□□□□ -2.27
PRKDC-208ENST00000536710 ZNF670-ZNF695F2Z2N8 137 aa0.88□□□□□ -2.27
PRKDC-208ENST00000536710 M0R129 80 aa0.88□□□□□ -2.27
PRKDC-208ENST00000536710 COPZ1P61923 177 aa0.88□□□□□ -2.27
PRKDC-208ENST00000536710 SELENOWP63302 87 aa0.88□□□□□ -2.27
PRKDC-208ENST00000536710 DEFB112Q30KQ8 113 aa0.88□□□□□ -2.27
PRKDC-208ENST00000536710 LINC01590Q5TEZ4 76 aa0.88□□□□□ -2.27
PRKDC-208ENST00000536710 DSCR8Q96T75 97 aa0.88□□□□□ -2.27
PRKDC-208ENST00000536710 CGREF1Q99674 301 aa0.88□□□□□ -2.27
PRKDC-208ENST00000536710 SAR1AQ9NR31 198 aa0.88□□□□□ -2.27
PRKDC-208ENST00000536710 COPZ2Q9P299 210 aa0.88□□□□□ -2.27
PRKDC-208ENST00000536710 PKHD1P08F94 4074 aa0.88□□□□□ -2.27
PRKDC-208ENST00000536710 K7ERU9 68 aa0.87□□□□□ -2.27
PRKDC-208ENST00000536710 M0R1W7 72 aa0.87□□□□□ -2.27
PRKDC-208ENST00000536710 NDUFA2O43678 99 aa0.87□□□□□ -2.27
PRKDC-208ENST00000536710 OR2T2Q6IF00 324 aa0.87□□□□□ -2.27
PRKDC-208ENST00000536710 VMO1Q7Z5L0 202 aa0.87□□□□□ -2.27
PRKDC-208ENST00000536710 WFDC9Q8NEX5 89 aa0.87□□□□□ -2.27
PRKDC-208ENST00000536710 GAFA1Q96PS6 74 aa0.87□□□□□ -2.27
PRKDC-208ENST00000536710 BET1LQ9NYM9 111 aa0.87□□□□□ -2.27
PRKDC-208ENST00000536710 PLAC8Q9NZF1 115 aa0.87□□□□□ -2.27
PRKDC-208ENST00000536710 ERG28Q9UKR5 140 aa0.87□□□□□ -2.27
PRKDC-208ENST00000536710 DNAH6Q9C0G6 4158 aa0.87□□□□□ -2.27
PRKDC-208ENST00000536710 ALMS1Q8TCU4 4167 aa0.86□□□□□ -2.27
PRKDC-208ENST00000536710 HERC2O95714 4834 aa0.86□□□□□ -2.27
PRKDC-208ENST00000536710 H3BUX3 64 aa0.86□□□□□ -2.27
PRKDC-208ENST00000536710 M0R135 149 aa0.86□□□□□ -2.27
PRKDC-208ENST00000536710 NPFFO15130 113 aa0.86□□□□□ -2.27
PRKDC-208ENST00000536710 PIN1P1O15428 100 aa0.86□□□□□ -2.27
PRKDC-208ENST00000536710 GYPAP02724 150 aa0.86□□□□□ -2.27
PRKDC-208ENST00000536710 LINC00694P0DN24 101 aa0.86□□□□□ -2.27
PRKDC-208ENST00000536710 COX4I1P13073 169 aa0.86□□□□□ -2.27
PRKDC-208ENST00000536710 RPS27P42677 84 aaKnown RBP0.86□□□□□ -2.27
PRKDC-208ENST00000536710 CYP2G1PQ6ZSU1 146 aa0.86□□□□□ -2.27
PRKDC-208ENST00000536710 NDUFA11Q86Y39 141 aa0.86□□□□□ -2.27
PRKDC-208ENST00000536710 MYOZ3Q8TDC0 251 aa0.86□□□□□ -2.27
PRKDC-208ENST00000536710 IFI27L1Q96BM0 104 aa0.86□□□□□ -2.27
PRKDC-208ENST00000536710 CMC2Q9NRP2 79 aa0.86□□□□□ -2.27
PRKDC-208ENST00000536710 IER3IP1Q9Y5U9 82 aa0.86□□□□□ -2.27
PRKDC-208ENST00000536710 V9GYS6 101 aa0.86□□□□□ -2.27
PRKDC-208ENST00000536710 PKD1P98161 4303 aa0.86□□□□□ -2.27
PRKDC-208ENST00000536710 FAT2Q9NYQ8 4349 aa0.85□□□□□ -2.27
PRKDC-208ENST00000536710 PLECQ15149 4684 aaKnown RBP0.85□□□□□ -2.27
PRKDC-208ENST00000536710 A0A0G2JND7 137 aa0.85□□□□□ -2.27
PRKDC-208ENST00000536710 PYYP10082 97 aa0.85□□□□□ -2.27
PRKDC-208ENST00000536710 CCL3L1P16619 93 aa0.85□□□□□ -2.27
PRKDC-208ENST00000536710 RYR1P21817 5038 aa0.85□□□□□ -2.27
PRKDC-208ENST00000536710 GUCA1AP43080 201 aaPredicted RBP0.85□□□□□ -2.27
PRKDC-208ENST00000536710 MINOS1Q5TGZ0 78 aa0.85□□□□□ -2.27
PRKDC-208ENST00000536710 RPL13AP3Q6NVV1 102 aa0.85□□□□□ -2.27
PRKDC-208ENST00000536710 SPTSSAQ969W0 71 aa0.85□□□□□ -2.27
PRKDC-208ENST00000536710 LINC00312Q9Y6C7 94 aa0.85□□□□□ -2.27
PRKDC-208ENST00000536710 ABCA13Q86UQ4 5058 aa0.85□□□□□ -2.27
PRKDC-208ENST00000536710 VPS13DQ5THJ4 4388 aa0.85□□□□□ -2.27
PRKDC-208ENST00000536710 KIAA1109Q2LD37 5005 aa0.85□□□□□ -2.27
PRKDC-208ENST00000536710 DNAH2Q9P225 4427 aa0.84□□□□□ -2.27
PRKDC-208ENST00000536710 TRAV12-2A0A075B6T6 113 aa0.84□□□□□ -2.27
PRKDC-208ENST00000536710 CCDC179H3BU77 68 aa0.84□□□□□ -2.27
PRKDC-208ENST00000536710 SMIM11AP58511 58 aa0.84□□□□□ -2.27
PRKDC-208ENST00000536710 SMCO1Q147U7 214 aa0.84□□□□□ -2.27
PRKDC-208ENST00000536710 SMIM21Q3B7S5 101 aa0.84□□□□□ -2.27
PRKDC-208ENST00000536710 C12orf73Q69YU5 71 aa0.84□□□□□ -2.27
PRKDC-208ENST00000536710 HEPN1Q6WQI6 88 aa0.84□□□□□ -2.27
PRKDC-208ENST00000536710 PP6455Q8WZ26 134 aa0.84□□□□□ -2.27
PRKDC-208ENST00000536710 RERGLQ9H628 205 aa0.84□□□□□ -2.27
PRKDC-208ENST00000536710 R4GMQ9 66 aa0.84□□□□□ -2.27
PRKDC-208ENST00000536710 DNAH10Q8IVF4 4471 aa0.83□□□□□ -2.28
PRKDC-208ENST00000536710 TNCP24821 2201 aa0.83□□□□□ -2.28
PRKDC-208ENST00000536710 LCE6AA0A183 80 aa0.83□□□□□ -2.28
PRKDC-208ENST00000536710 A6NIN4 97 aa0.83□□□□□ -2.28
PRKDC-208ENST00000536710 OOSP1A8MZH6 123 aa0.83□□□□□ -2.28
PRKDC-208ENST00000536710 NDUFA3O95167 84 aa0.83□□□□□ -2.28
PRKDC-208ENST00000536710 RBP2P50120 134 aa0.83□□□□□ -2.28
PRKDC-208ENST00000536710 EDDM3BP56851 147 aa0.83□□□□□ -2.28
PRKDC-208ENST00000536710 KLK9Q2XQG4 91 aa0.83□□□□□ -2.28
PRKDC-208ENST00000536710 MIC13Q5XKP0 118 aa0.83□□□□□ -2.28
PRKDC-208ENST00000536710 DEFB107AQ8IZN7 70 aa0.83□□□□□ -2.28
PRKDC-208ENST00000536710 TSKUQ8WUA8 353 aa0.83□□□□□ -2.28
PRKDC-208ENST00000536710 TTTY10Q9BZA0 68 aa0.83□□□□□ -2.28
PRKDC-208ENST00000536710 HILPDAQ9Y5L2 63 aa0.83□□□□□ -2.28
PRKDC-208ENST00000536710 HSPG2P98160 4391 aa0.82□□□□□ -2.28
PRKDC-208ENST00000536710 DNAH17Q9UFH2 4485 aa0.82□□□□□ -2.28
PRKDC-208ENST00000536710 CYB5AP00167 134 aa0.82□□□□□ -2.28
PRKDC-208ENST00000536710 IFNGP01579 166 aa0.82□□□□□ -2.28
PRKDC-208ENST00000536710 HMGN1P05114 100 aa0.82□□□□□ -2.28
PRKDC-208ENST00000536710 PIPP12273 146 aaPredicted RBP0.82□□□□□ -2.28
PRKDC-208ENST00000536710 SNRPGP62308 76 aaKnown RBP0.82□□□□□ -2.28
PRKDC-208ENST00000536710 HMGN3Q15651 99 aa0.82□□□□□ -2.28
PRKDC-208ENST00000536710 DEFB136Q30KP8 78 aa0.82□□□□□ -2.28
PRKDC-208ENST00000536710 PIGYQ3MUY2 71 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 187.3 ms