RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 IFITM1P13164 125 aa7.33□□□□□ -1.24
CDCA3-206ENST00000536241 CTAG1AP78358 180 aa7.33□□□□□ -1.24
CDCA3-206ENST00000536241 ARL17AQ8IVW1 177 aa7.33□□□□□ -1.24
CDCA3-206ENST00000536241 FAM30AQ9NZY2 134 aa7.33□□□□□ -1.24
CDCA3-206ENST00000536241 RYR3Q15413 4870 aa7.33□□□□□ -1.24
CDCA3-206ENST00000536241 FAM168BA1KXE4 195 aa7.32□□□□□ -1.24
CDCA3-206ENST00000536241 A0A1W2PNN7 141 aa7.31□□□□□ -1.24
CDCA3-206ENST00000536241 DDTP30046 118 aa7.31□□□□□ -1.24
CDCA3-206ENST00000536241 PRR3P79522 188 aaKnown RBP7.31□□□□□ -1.24
CDCA3-206ENST00000536241 TAL2Q16559 108 aa7.31□□□□□ -1.24
CDCA3-206ENST00000536241 CEND1Q8N111 149 aa7.31□□□□□ -1.24
CDCA3-206ENST00000536241 Q8NDZ9 215 aa7.31□□□□□ -1.24
CDCA3-206ENST00000536241 LINC00474Q9P2X8 69 aa7.31□□□□□ -1.24
CDCA3-206ENST00000536241 PCP4L1A6NKN8 68 aa7.3□□□□□ -1.24
CDCA3-206ENST00000536241 SERTAD4-AS1Q5TG53 156 aa7.3□□□□□ -1.24
CDCA3-206ENST00000536241 KRTAP7-1Q8IUC3 87 aa7.3□□□□□ -1.24
CDCA3-206ENST00000536241 SPACA4Q8TDM5 124 aa7.3□□□□□ -1.24
CDCA3-206ENST00000536241 DNAH11Q96DT5 4516 aa7.3□□□□□ -1.24
CDCA3-206ENST00000536241 PKD1P98161 4303 aa7.3□□□□□ -1.24
CDCA3-206ENST00000536241 A0A087WYN8 130 aa7.3□□□□□ -1.24
CDCA3-206ENST00000536241 HSD52Q0P140 79 aa7.3□□□□□ -1.24
CDCA3-206ENST00000536241 COPS9Q8WXC6 57 aa7.3□□□□□ -1.24
CDCA3-206ENST00000536241 A4D1N5 150 aa7.29□□□□□ -1.24
CDCA3-206ENST00000536241 VPREB1P12018 145 aa7.29□□□□□ -1.24
CDCA3-206ENST00000536241 RPL24P83731 157 aaKnown RBP7.29□□□□□ -1.24
CDCA3-206ENST00000536241 FAM19A5Q7Z5A7 132 aaPredicted RBP7.29□□□□□ -1.24
CDCA3-206ENST00000536241 PLA2G2DQ9UNK4 145 aa7.29□□□□□ -1.24
CDCA3-206ENST00000536241 HINT1P49773 126 aaPredicted RBP7.28□□□□□ -1.24
CDCA3-206ENST00000536241 FXYD2P54710 66 aa7.28□□□□□ -1.24
CDCA3-206ENST00000536241 Q6ZSA8 131 aa7.28□□□□□ -1.24
CDCA3-206ENST00000536241 PPDPFQ9H3Y8 114 aa7.28□□□□□ -1.24
CDCA3-206ENST00000536241 C22orf24Q9Y442 160 aa7.28□□□□□ -1.24
CDCA3-206ENST00000536241 HECTD4Q9Y4D8 3996 aa7.28□□□□□ -1.24
CDCA3-206ENST00000536241 NDUFC2O95298 119 aa7.27□□□□□ -1.25
CDCA3-206ENST00000536241 IGKV2-28A0A075B6P5 120 aa7.26□□□□□ -1.25
CDCA3-206ENST00000536241 NCR3O14931 201 aa7.26□□□□□ -1.25
CDCA3-206ENST00000536241 IGKV2D-28P01615 120 aa7.26□□□□□ -1.25
CDCA3-206ENST00000536241 HAMPP81172 84 aa7.26□□□□□ -1.25
CDCA3-206ENST00000536241 BVES-AS1Q5T3Y7 98 aa7.26□□□□□ -1.25
CDCA3-206ENST00000536241 EPM2AB3EWF7 344 aa7.25□□□□□ -1.25
CDCA3-206ENST00000536241 NKAPP1Q8N9T2 125 aa7.25□□□□□ -1.25
CDCA3-206ENST00000536241 CIRBP-AS1Q8TBR5 109 aa7.25□□□□□ -1.25
CDCA3-206ENST00000536241 PLAC8Q9NZF1 115 aa7.25□□□□□ -1.25
CDCA3-206ENST00000536241 IGLV5-37A0A075B6J1 123 aa7.24□□□□□ -1.25
CDCA3-206ENST00000536241 GAGE10A6NGK3 116 aa7.24□□□□□ -1.25
CDCA3-206ENST00000536241 M0R378 163 aa7.24□□□□□ -1.25
CDCA3-206ENST00000536241 CFC1BP0CG36 223 aa7.24□□□□□ -1.25
CDCA3-206ENST00000536241 CFC1P0CG37 223 aa7.24□□□□□ -1.25
CDCA3-206ENST00000536241 SCXQ7RTU7 201 aa7.24□□□□□ -1.25
CDCA3-206ENST00000536241 PHF5AQ7RTV0 110 aaKnown RBP7.24□□□□□ -1.25
CDCA3-206ENST00000536241 M0QXV9 152 aa7.24□□□□□ -1.25
CDCA3-206ENST00000536241 MRPL55Q7Z7F7 128 aaKnown RBP7.24□□□□□ -1.25
CDCA3-206ENST00000536241 LINC00337Q8N6G1 96 aa7.24□□□□□ -1.25
CDCA3-206ENST00000536241 C7orf33Q8WU49 177 aa7.24□□□□□ -1.25
CDCA3-206ENST00000536241 LINC00167Q96N53 147 aa7.24□□□□□ -1.25
CDCA3-206ENST00000536241 DNAH5Q8TE73 4624 aa7.23□□□□□ -1.25
CDCA3-206ENST00000536241 TRBV10-2A0A0K0K1G8 114 aa7.23□□□□□ -1.25
CDCA3-206ENST00000536241 TMEM238LA0A1B0GVL6 79 aa7.23□□□□□ -1.25
CDCA3-206ENST00000536241 A6NJY4 79 aa7.23□□□□□ -1.25
CDCA3-206ENST00000536241 RPL37AP8A6NKH3 93 aa7.23□□□□□ -1.25
CDCA3-206ENST00000536241 M0R143 59 aa7.23□□□□□ -1.25
CDCA3-206ENST00000536241 XGP55808 180 aa7.23□□□□□ -1.25
CDCA3-206ENST00000536241 OR13C6PQ8NH95 151 aa7.23□□□□□ -1.25
CDCA3-206ENST00000536241 NHP2Q9NX24 153 aaKnown RBP7.23□□□□□ -1.25
CDCA3-206ENST00000536241 A6NDN8 102 aa7.22□□□□□ -1.25
CDCA3-206ENST00000536241 BATFQ16520 125 aa7.22□□□□□ -1.25
CDCA3-206ENST00000536241 S100A7L2Q5SY68 101 aa7.22□□□□□ -1.25
CDCA3-206ENST00000536241 TRBV10-3A0A0K0K1G6 114 aa7.21□□□□□ -1.26
CDCA3-206ENST00000536241 LBHQ53QV2 105 aaPredicted RBP7.21□□□□□ -1.26
CDCA3-206ENST00000536241 RAB37Q96AX2 223 aa7.21□□□□□ -1.26
CDCA3-206ENST00000536241 TRAV13-2A0A0B4J235 113 aa7.2□□□□□ -1.26
CDCA3-206ENST00000536241 KRTAP11-1Q8IUC1 163 aa7.2□□□□□ -1.26
CDCA3-206ENST00000536241 TMEM126AQ9H061 195 aa7.2□□□□□ -1.26
CDCA3-206ENST00000536241 IGLV1-50A0A075B6I6 118 aa7.19□□□□□ -1.26
CDCA3-206ENST00000536241 A0A0B4J2C4 111 aa7.19□□□□□ -1.26
CDCA3-206ENST00000536241 K7ERJ3 54 aa7.19□□□□□ -1.26
CDCA3-206ENST00000536241 IGLV6-57P01721 117 aa7.19□□□□□ -1.26
CDCA3-206ENST00000536241 UBE2BP63146 152 aa7.19□□□□□ -1.26
CDCA3-206ENST00000536241 A0A1B0GWB2 263 aa7.18□□□□□ -1.26
CDCA3-206ENST00000536241 SNHG12Q9BXW3 62 aa7.18□□□□□ -1.26
CDCA3-206ENST00000536241 PRO1854Q9UHT4 67 aa7.18□□□□□ -1.26
CDCA3-206ENST00000536241 H7C2G1 150 aa7.17□□□□□ -1.26
CDCA3-206ENST00000536241 RPL13AP40429 203 aaKnown RBP7.17□□□□□ -1.26
CDCA3-206ENST00000536241 PKHD1P08F94 4074 aa7.17□□□□□ -1.26
CDCA3-206ENST00000536241 SMR3BP02814 79 aaPredicted RBP7.17□□□□□ -1.26
CDCA3-206ENST00000536241 KCNQ1DNQ9H478 68 aa7.16□□□□□ -1.26
CDCA3-206ENST00000536241 LRP1BQ9NZR2 4599 aa7.15□□□□□ -1.26
CDCA3-206ENST00000536241 DYNC1H1Q14204 4646 aaKnown RBP7.15□□□□□ -1.27
CDCA3-206ENST00000536241 SMIM11BQ8TCY0 68 aa7.15□□□□□ -1.27
CDCA3-206ENST00000536241 DNAH8Q96JB1 4490 aa7.14□□□□□ -1.27
CDCA3-206ENST00000536241 TRAV23DV6A0A075B6W5 121 aa7.14□□□□□ -1.27
CDCA3-206ENST00000536241 CDK2AP2O75956 126 aa7.13□□□□□ -1.27
CDCA3-206ENST00000536241 Q1RN00 199 aa7.13□□□□□ -1.27
CDCA3-206ENST00000536241 REG3GQ6UW15 175 aa7.13□□□□□ -1.27
CDCA3-206ENST00000536241 PSORS1C2Q9UIG4 136 aa7.13□□□□□ -1.27
CDCA3-206ENST00000536241 PRYO14603 147 aa7.12□□□□□ -1.27
CDCA3-206ENST00000536241 ZNF73O43830 326 aaPredicted RBP7.12□□□□□ -1.27
CDCA3-206ENST00000536241 TSPAN13O95857 204 aa7.12□□□□□ -1.27
CDCA3-206ENST00000536241 CBY1Q9Y3M2 126 aa7.12□□□□□ -1.27
CDCA3-206ENST00000536241 SPRR1AP35321 89 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms