RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 LINC01546A6NGU7 62 aa7.4□□□□□ -1.22
TNFRSF1A-207ENST00000535958 SPRR4Q96PI1 79 aa7.4□□□□□ -1.22
TNFRSF1A-207ENST00000535958 ZNF22P17026 224 aaPredicted RBP7.39□□□□□ -1.23
TNFRSF1A-207ENST00000535958 LINC00158P58513 81 aa7.39□□□□□ -1.23
TNFRSF1A-207ENST00000535958 ATP6V1G1O75348 118 aa7.38□□□□□ -1.23
TNFRSF1A-207ENST00000535958 COX19Q49B96 90 aa7.38□□□□□ -1.23
TNFRSF1A-207ENST00000535958 TMEM170BQ5T4T1 132 aa7.38□□□□□ -1.23
TNFRSF1A-207ENST00000535958 Q8NBF4 154 aa7.38□□□□□ -1.23
TNFRSF1A-207ENST00000535958 SEC61BP60468 96 aaKnown RBP7.37□□□□□ -1.23
TNFRSF1A-207ENST00000535958 S100A12P80511 92 aa7.37□□□□□ -1.23
TNFRSF1A-207ENST00000535958 FABP9Q0Z7S8 132 aa7.37□□□□□ -1.23
TNFRSF1A-207ENST00000535958 DAND5Q8N907 189 aa7.37□□□□□ -1.23
TNFRSF1A-207ENST00000535958 PRYO14603 147 aa7.36□□□□□ -1.23
TNFRSF1A-207ENST00000535958 SPINK1P00995 79 aa7.36□□□□□ -1.23
TNFRSF1A-207ENST00000535958 KRTAP13-3Q3SY46 172 aa7.36□□□□□ -1.23
TNFRSF1A-207ENST00000535958 ASB16-AS1Q495Z4 193 aa7.36□□□□□ -1.23
TNFRSF1A-207ENST00000535958 FAM19A2Q8N3H0 131 aa7.36□□□□□ -1.23
TNFRSF1A-207ENST00000535958 A0A0U1RRA0 63 aa7.35□□□□□ -1.23
TNFRSF1A-207ENST00000535958 ETDCA0A1B0GVM5 59 aa7.35□□□□□ -1.23
TNFRSF1A-207ENST00000535958 Q8NDZ9 215 aa7.35□□□□□ -1.23
TNFRSF1A-207ENST00000535958 HBDP02042 147 aa7.34□□□□□ -1.23
TNFRSF1A-207ENST00000535958 MEIG1Q5JSS6 88 aa7.34□□□□□ -1.23
TNFRSF1A-207ENST00000535958 BAGE3Q86Y29 109 aa7.33□□□□□ -1.24
TNFRSF1A-207ENST00000535958 SEC11CQ9BY50 192 aa7.33□□□□□ -1.24
TNFRSF1A-207ENST00000535958 C11orf86A6NJI1 115 aa7.32□□□□□ -1.24
TNFRSF1A-207ENST00000535958 NCR3O14931 201 aa7.32□□□□□ -1.24
TNFRSF1A-207ENST00000535958 BOD1L2Q8IYS8 172 aa7.32□□□□□ -1.24
TNFRSF1A-207ENST00000535958 SMCR5Q8TEV8 140 aa7.32□□□□□ -1.24
TNFRSF1A-207ENST00000535958 GAGE2AQ6NT46 116 aa7.31□□□□□ -1.24
TNFRSF1A-207ENST00000535958 UQCC3Q6UW78 93 aa7.31□□□□□ -1.24
TNFRSF1A-207ENST00000535958 IGLV9-49A0A0B4J1Y8 123 aa7.3□□□□□ -1.24
TNFRSF1A-207ENST00000535958 LINC00614P0C842 121 aa7.3□□□□□ -1.24
TNFRSF1A-207ENST00000535958 MOBPQ13875 183 aa7.3□□□□□ -1.24
TNFRSF1A-207ENST00000535958 PMCHL1Q16048 86 aa7.3□□□□□ -1.24
TNFRSF1A-207ENST00000535958 CHTOPQ9Y3Y2 248 aaKnown RBP7.3□□□□□ -1.24
TNFRSF1A-207ENST00000535958 A0A096LNJ9 63 aa7.29□□□□□ -1.24
TNFRSF1A-207ENST00000535958 TMEM218A2RU14 115 aa7.29□□□□□ -1.24
TNFRSF1A-207ENST00000535958 SMIM13P0DJ93 91 aa7.29□□□□□ -1.24
TNFRSF1A-207ENST00000535958 CLLU1Q5K131 121 aa7.29□□□□□ -1.24
TNFRSF1A-207ENST00000535958 LINC00587B1AMM8 73 aa7.28□□□□□ -1.24
TNFRSF1A-207ENST00000535958 RPS29P62273 56 aaKnown RBP7.28□□□□□ -1.24
TNFRSF1A-207ENST00000535958 KCNQ1DNQ9H478 68 aa7.28□□□□□ -1.24
TNFRSF1A-207ENST00000535958 TRBV10-3A0A0K0K1G6 114 aa7.27□□□□□ -1.25
TNFRSF1A-207ENST00000535958 SLC25A20O43772 301 aa7.27□□□□□ -1.25
TNFRSF1A-207ENST00000535958 SPRR1AP35321 89 aa7.27□□□□□ -1.25
TNFRSF1A-207ENST00000535958 HERV-K104P63124 156 aa7.27□□□□□ -1.25
TNFRSF1A-207ENST00000535958 LINC00483Q53H64 154 aa7.27□□□□□ -1.25
TNFRSF1A-207ENST00000535958 MIR7-3HGQ8N6C7 128 aa7.27□□□□□ -1.25
TNFRSF1A-207ENST00000535958 C18orf32Q8TCD1 76 aa7.27□□□□□ -1.25
TNFRSF1A-207ENST00000535958 MAP1LC3CQ9BXW4 147 aa7.27□□□□□ -1.25
TNFRSF1A-207ENST00000535958 TRAPPC1Q9Y5R8 145 aa7.27□□□□□ -1.25
TNFRSF1A-207ENST00000535958 TMEM223A0PJW6 202 aa7.26□□□□□ -1.25
TNFRSF1A-207ENST00000535958 LCE2DQ5TA82 110 aaPredicted RBP7.26□□□□□ -1.25
TNFRSF1A-207ENST00000535958 SSBP3-AS1Q7Z2R9 100 aa7.26□□□□□ -1.25
TNFRSF1A-207ENST00000535958 RPS10P5Q9NQ39 176 aa7.26□□□□□ -1.25
TNFRSF1A-207ENST00000535958 C9orf153Q5TBE3 101 aa7.25□□□□□ -1.25
TNFRSF1A-207ENST00000535958 Q8N377 158 aa7.25□□□□□ -1.25
TNFRSF1A-207ENST00000535958 RHEBQ15382 184 aa7.24□□□□□ -1.25
TNFRSF1A-207ENST00000535958 URB1-AS1Q96HZ7 61 aa7.24□□□□□ -1.25
TNFRSF1A-207ENST00000535958 KRTAP4-16G5E9R7 235 aaPredicted RBP7.23□□□□□ -1.25
TNFRSF1A-207ENST00000535958 DDTP30046 118 aa7.23□□□□□ -1.25
TNFRSF1A-207ENST00000535958 KRTAP4-1Q9BYQ7 146 aa7.23□□□□□ -1.25
TNFRSF1A-207ENST00000535958 TRAV12-1A0A0B4J245 112 aa7.22□□□□□ -1.25
TNFRSF1A-207ENST00000535958 MYMXA0A1B0GTQ4 84 aa7.22□□□□□ -1.25
TNFRSF1A-207ENST00000535958 B5MCH6 92 aa7.22□□□□□ -1.25
TNFRSF1A-207ENST00000535958 MIEN1Q9BRT3 115 aa7.22□□□□□ -1.25
TNFRSF1A-207ENST00000535958 CRCT1Q9UGL9 99 aa7.22□□□□□ -1.25
TNFRSF1A-207ENST00000535958 JOSD1Q15040 202 aaPredicted RBP7.21□□□□□ -1.26
TNFRSF1A-207ENST00000535958 XP32Q5T750 250 aa7.21□□□□□ -1.26
TNFRSF1A-207ENST00000535958 IFI27L1Q96BM0 104 aa7.21□□□□□ -1.26
TNFRSF1A-207ENST00000535958 S100A7L2Q5SY68 101 aa7.2□□□□□ -1.26
TNFRSF1A-207ENST00000535958 Q6ZRX8 168 aa7.2□□□□□ -1.26
TNFRSF1A-207ENST00000535958 TRBV10-2A0A0K0K1G8 114 aa7.19□□□□□ -1.26
TNFRSF1A-207ENST00000535958 ERC2-IT1O76042 136 aa7.19□□□□□ -1.26
TNFRSF1A-207ENST00000535958 COMMD7Q86VX2 200 aa7.19□□□□□ -1.26
TNFRSF1A-207ENST00000535958 CHCHD1Q96BP2 118 aaKnown RBP7.18□□□□□ -1.26
TNFRSF1A-207ENST00000535958 SPANXB1Q9NS25 103 aaPredicted RBP7.18□□□□□ -1.26
TNFRSF1A-207ENST00000535958 H0Y8G0 127 aa7.17□□□□□ -1.26
TNFRSF1A-207ENST00000535958 Q9BRP9 147 aa7.17□□□□□ -1.26
TNFRSF1A-207ENST00000535958 LIMD2Q9BT23 127 aa7.17□□□□□ -1.26
TNFRSF1A-207ENST00000535958 TRAV23DV6A0A075B6W5 121 aa7.16□□□□□ -1.26
TNFRSF1A-207ENST00000535958 CFC1BP0CG36 223 aa7.16□□□□□ -1.26
TNFRSF1A-207ENST00000535958 IFITM2Q01629 132 aa7.16□□□□□ -1.26
TNFRSF1A-207ENST00000535958 HINT1P49773 126 aaPredicted RBP7.15□□□□□ -1.26
TNFRSF1A-207ENST00000535958 HSBP1O75506 76 aa7.14□□□□□ -1.27
TNFRSF1A-207ENST00000535958 HERVK_113P61574 105 aa7.14□□□□□ -1.27
TNFRSF1A-207ENST00000535958 CBY1Q9Y3M2 126 aa7.14□□□□□ -1.27
TNFRSF1A-207ENST00000535958 IGLV8-61A0A075B6I0 122 aa7.13□□□□□ -1.27
TNFRSF1A-207ENST00000535958 LEPROTO15243 131 aa7.13□□□□□ -1.27
TNFRSF1A-207ENST00000535958 C10orf91Q5T1B1 145 aa7.13□□□□□ -1.27
TNFRSF1A-207ENST00000535958 SLC25A34Q6PIV7 304 aa7.13□□□□□ -1.27
TNFRSF1A-207ENST00000535958 LOC107984156A0A0G2JMH3 177 aa7.12□□□□□ -1.27
TNFRSF1A-207ENST00000535958 ZNF73O43830 326 aaPredicted RBP7.12□□□□□ -1.27
TNFRSF1A-207ENST00000535958 NDUFC2O95298 119 aa7.12□□□□□ -1.27
TNFRSF1A-207ENST00000535958 LGALS3P17931 250 aaKnown RBP7.12□□□□□ -1.27
TNFRSF1A-207ENST00000535958 PCOTHQ58A44 107 aa7.12□□□□□ -1.27
TNFRSF1A-207ENST00000535958 ARL17AQ8IVW1 177 aa7.12□□□□□ -1.27
TNFRSF1A-207ENST00000535958 FSIP2Q5CZC0 6907 aa7.11□□□□□ -1.27
TNFRSF1A-207ENST00000535958 C9orf92A6NGG3 77 aa7.11□□□□□ -1.27
TNFRSF1A-207ENST00000535958 IGLV6-57P01721 117 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms