RNA–Protein interactions for RNA: ENST00000535621.6

PDXDC1-205, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 2,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-205ENST00000535621 SLPIP03973 132 aa13.73□□□□□ -0.21
PDXDC1-205ENST00000535621 TTC32Q5I0X7 151 aa13.73□□□□□ -0.21
PDXDC1-205ENST00000535621 Q8NDZ9 215 aa13.73□□□□□ -0.21
PDXDC1-205ENST00000535621 LECT2O14960 151 aa13.73□□□□□ -0.21
PDXDC1-205ENST00000535621 PRR3P79522 188 aaKnown RBP13.72□□□□□ -0.21
PDXDC1-205ENST00000535621 NDUFC2-KCTD14E9PQ53 114 aa13.71□□□□□ -0.21
PDXDC1-205ENST00000535621 ALMS1Q8TCU4 4167 aa13.71□□□□□ -0.22
PDXDC1-205ENST00000535621 LY6G6CO95867 125 aa13.7□□□□□ -0.22
PDXDC1-205ENST00000535621 COX6CP09669 75 aa13.7□□□□□ -0.22
PDXDC1-205ENST00000535621 CARD19Q96LW7 228 aa13.7□□□□□ -0.22
PDXDC1-205ENST00000535621 XAGE1AQ9HD64 81 aa13.7□□□□□ -0.22
PDXDC1-205ENST00000535621 C3orf84H3BNL1 204 aa13.69□□□□□ -0.22
PDXDC1-205ENST00000535621 WFDC2Q14508 124 aa13.69□□□□□ -0.22
PDXDC1-205ENST00000535621 PSCAO43653 123 aa13.68□□□□□ -0.22
PDXDC1-205ENST00000535621 DNAH2Q9P225 4427 aa13.68□□□□□ -0.22
PDXDC1-205ENST00000535621 RNF151Q2KHN1 245 aa13.68□□□□□ -0.22
PDXDC1-205ENST00000535621 Q6ZRP5 223 aa13.68□□□□□ -0.22
PDXDC1-205ENST00000535621 RPL28P46779 137 aaKnown RBP13.67□□□□□ -0.22
PDXDC1-205ENST00000535621 OR13C6PQ8NH95 151 aa13.67□□□□□ -0.22
PDXDC1-205ENST00000535621 LINC00476Q8WZB0 136 aa13.67□□□□□ -0.22
PDXDC1-205ENST00000535621 HYDINQ4G0P3 5121 aa13.67□□□□□ -0.22
PDXDC1-205ENST00000535621 SMIM11BQ8TCY0 68 aa13.66□□□□□ -0.22
PDXDC1-205ENST00000535621 PRO0461Q9UI25 63 aa13.65□□□□□ -0.22
PDXDC1-205ENST00000535621 F8W1H4 67 aa13.64□□□□□ -0.23
PDXDC1-205ENST00000535621 NCR3O14931 201 aa13.64□□□□□ -0.23
PDXDC1-205ENST00000535621 TLX1NBP0CAT3 122 aa13.64□□□□□ -0.23
PDXDC1-205ENST00000535621 ATXN8Q156A1 80 aa13.64□□□□□ -0.23
PDXDC1-205ENST00000535621 GAGE2EQ4V326 116 aa13.64□□□□□ -0.23
PDXDC1-205ENST00000535621 MTURNQ8N3F0 131 aa13.64□□□□□ -0.23
PDXDC1-205ENST00000535621 CLEC2BQ92478 149 aa13.64□□□□□ -0.23
PDXDC1-205ENST00000535621 GAGE2DQ9UEU5 116 aa13.64□□□□□ -0.23
PDXDC1-205ENST00000535621 DNAH6Q9C0G6 4158 aa13.63□□□□□ -0.23
PDXDC1-205ENST00000535621 Q6ZRN7 208 aaPredicted RBP13.62□□□□□ -0.23
PDXDC1-205ENST00000535621 TMEM126AQ9H061 195 aa13.62□□□□□ -0.23
PDXDC1-205ENST00000535621 LST1O00453 97 aa13.61□□□□□ -0.23
PDXDC1-205ENST00000535621 Q6ZR54 194 aa13.61□□□□□ -0.23
PDXDC1-205ENST00000535621 TRBV10-2A0A0K0K1G8 114 aa13.6□□□□□ -0.23
PDXDC1-205ENST00000535621 RPL18AQ02543 176 aaKnown RBP13.59□□□□□ -0.23
PDXDC1-205ENST00000535621 C9orf129Q5T035 196 aaKnown RBP13.59□□□□□ -0.23
PDXDC1-205ENST00000535621 VPREB1P12018 145 aa13.59□□□□□ -0.23
PDXDC1-205ENST00000535621 LRCOL1A6NCL2 159 aa13.57□□□□□ -0.24
PDXDC1-205ENST00000535621 SMCPP49901 116 aaPredicted RBP13.57□□□□□ -0.24
PDXDC1-205ENST00000535621 CNBPP62633 177 aaKnown RBP13.57□□□□□ -0.24
PDXDC1-205ENST00000535621 S100A7L2Q5SY68 101 aa13.57□□□□□ -0.24
PDXDC1-205ENST00000535621 SACSQ9NZJ4 4579 aa13.57□□□□□ -0.24
PDXDC1-205ENST00000535621 LINC01620Q4KN68 170 aa13.57□□□□□ -0.24
PDXDC1-205ENST00000535621 C14orf177Q52M58 125 aa13.57□□□□□ -0.24
PDXDC1-205ENST00000535621 IGLV6-57P01721 117 aa13.56□□□□□ -0.24
PDXDC1-205ENST00000535621 C9JAW5 83 aa13.56□□□□□ -0.24
PDXDC1-205ENST00000535621 FAM218AQ96MZ4 157 aa13.55□□□□□ -0.24
PDXDC1-205ENST00000535621 LOC107984640A0A0U1RRK4 108 aa13.52□□□□□ -0.24
PDXDC1-205ENST00000535621 H0YGX0 51 aa13.52□□□□□ -0.24
PDXDC1-205ENST00000535621 SLC25A20O43772 301 aa13.52□□□□□ -0.25
PDXDC1-205ENST00000535621 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.51□□□□□ -0.25
PDXDC1-205ENST00000535621 TRBV10-3A0A0K0K1G6 114 aa13.51□□□□□ -0.25
PDXDC1-205ENST00000535621 M0R378 163 aa13.51□□□□□ -0.25
PDXDC1-205ENST00000535621 GAGE2BQ13066 116 aa13.51□□□□□ -0.25
PDXDC1-205ENST00000535621 ETDBQ3ZM63 59 aa13.5□□□□□ -0.25
PDXDC1-205ENST00000535621 SERTAD4-AS1Q5TG53 156 aa13.5□□□□□ -0.25
PDXDC1-205ENST00000535621 DNAH17Q9UFH2 4485 aa13.5□□□□□ -0.25
PDXDC1-205ENST00000535621 TRACP01848 142 aa13.49□□□□□ -0.25
PDXDC1-205ENST00000535621 PLA2G2DQ9UNK4 145 aa13.49□□□□□ -0.25
PDXDC1-205ENST00000535621 C6orf99Q4VX62 202 aa13.48□□□□□ -0.25
PDXDC1-205ENST00000535621 FRAS1Q86XX4 4008 aa13.48□□□□□ -0.25
PDXDC1-205ENST00000535621 A0A087WYN8 130 aa13.47□□□□□ -0.25
PDXDC1-205ENST00000535621 M0QXV9 152 aa13.47□□□□□ -0.25
PDXDC1-205ENST00000535621 ANKRD29Q8N6D5 301 aa13.47□□□□□ -0.25
PDXDC1-205ENST00000535621 FAM168BA1KXE4 195 aa13.46□□□□□ -0.25
PDXDC1-205ENST00000535621 C1orf134Q5TEV5 83 aa13.46□□□□□ -0.25
PDXDC1-205ENST00000535621 LINC01600Q96MT4 127 aa13.46□□□□□ -0.25
PDXDC1-205ENST00000535621 TRAV23DV6A0A075B6W5 121 aa13.45□□□□□ -0.26
PDXDC1-205ENST00000535621 OCIAD2Q56VL3 154 aa13.45□□□□□ -0.26
PDXDC1-205ENST00000535621 NKAPP1Q8N9T2 125 aa13.45□□□□□ -0.26
PDXDC1-205ENST00000535621 Q8N814 137 aa13.44□□□□□ -0.26
PDXDC1-205ENST00000535621 C16orf90A8MZG2 172 aa13.44□□□□□ -0.26
PDXDC1-205ENST00000535621 FUSP35637 526 aaKnown RBP eCLIP13.44□□□□□ -0.26
PDXDC1-205ENST00000535621 KRTAP7-1Q8IUC3 87 aa13.44□□□□□ -0.26
PDXDC1-205ENST00000535621 IGLV5-37A0A075B6J1 123 aa13.43□□□□□ -0.26
PDXDC1-205ENST00000535621 A0A096LNI7 61 aa13.43□□□□□ -0.26
PDXDC1-205ENST00000535621 H3BT86 120 aa13.43□□□□□ -0.26
PDXDC1-205ENST00000535621 A0A087WTM6 91 aa13.42□□□□□ -0.26
PDXDC1-205ENST00000535621 C9orf163Q8N9P6 203 aa13.42□□□□□ -0.26
PDXDC1-205ENST00000535621 TEN1Q86WV5 123 aa13.42□□□□□ -0.26
PDXDC1-205ENST00000535621 C7orf33Q8WU49 177 aa13.42□□□□□ -0.26
PDXDC1-205ENST00000535621 KMT2CQ8NEZ4 4911 aaKnown RBP13.41□□□□□ -0.26
PDXDC1-205ENST00000535621 HECTD4Q9Y4D8 3996 aa13.41□□□□□ -0.26
PDXDC1-205ENST00000535621 ZNF73O43830 326 aaPredicted RBP13.4□□□□□ -0.26
PDXDC1-205ENST00000535621 DIRC1Q969H9 104 aa13.39□□□□□ -0.27
PDXDC1-205ENST00000535621 DNAL4O96015 105 aa13.39□□□□□ -0.27
PDXDC1-205ENST00000535621 IGKV2-24A0A0C4DH68 120 aa13.38□□□□□ -0.27
PDXDC1-205ENST00000535621 LCE6AA0A183 80 aa13.38□□□□□ -0.27
PDXDC1-205ENST00000535621 RTL8CO15255 209 aa13.38□□□□□ -0.27
PDXDC1-205ENST00000535621 FAM19A5Q7Z5A7 132 aaPredicted RBP13.38□□□□□ -0.27
PDXDC1-205ENST00000535621 CBY1Q9Y3M2 126 aa13.38□□□□□ -0.27
PDXDC1-205ENST00000535621 C22orf24Q9Y442 160 aa13.38□□□□□ -0.27
PDXDC1-205ENST00000535621 A0A1B0GX51 115 aa13.37□□□□□ -0.27
PDXDC1-205ENST00000535621 TNP2Q05952 138 aa13.37□□□□□ -0.27
PDXDC1-205ENST00000535621 FAT2Q9NYQ8 4349 aa13.37□□□□□ -0.27
PDXDC1-205ENST00000535621 K7ERU9 68 aa13.36□□□□□ -0.27
PDXDC1-205ENST00000535621 LINC00575Q6W349 94 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms