RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 MPLKIPQ8TAP9 179 aa4.36□□□□□ -1.71
CLIP1-206ENST00000535290 GEMIN7Q9H840 131 aaKnown RBP4.36□□□□□ -1.71
CLIP1-206ENST00000535290 NDUFA13Q9P0J0 144 aa4.36□□□□□ -1.71
CLIP1-206ENST00000535290 CDKN2A-AS1Q9UH64 79 aa4.36□□□□□ -1.71
CLIP1-206ENST00000535290 IGLV9-49A0A0B4J1Y8 123 aa4.35□□□□□ -1.71
CLIP1-206ENST00000535290 ATP6V1G1O75348 118 aa4.35□□□□□ -1.71
CLIP1-206ENST00000535290 CXCL5P42830 114 aa4.35□□□□□ -1.71
CLIP1-206ENST00000535290 LINC00483Q53H64 154 aa4.35□□□□□ -1.71
CLIP1-206ENST00000535290 Q6Q795 121 aa4.35□□□□□ -1.71
CLIP1-206ENST00000535290 Q75L30 129 aa4.35□□□□□ -1.71
CLIP1-206ENST00000535290 SSBP3-AS1Q7Z2R9 100 aa4.35□□□□□ -1.71
CLIP1-206ENST00000535290 Q8NDZ9 215 aa4.35□□□□□ -1.71
CLIP1-206ENST00000535290 URB1-AS1Q96HZ7 61 aa4.35□□□□□ -1.71
CLIP1-206ENST00000535290 C2orf88Q9BSF0 95 aa4.35□□□□□ -1.71
CLIP1-206ENST00000535290 CBY1Q9Y3M2 126 aa4.35□□□□□ -1.71
CLIP1-206ENST00000535290 LINC00862A6NCI5 91 aa4.34□□□□□ -1.71
CLIP1-206ENST00000535290 NPYP01303 97 aa4.34□□□□□ -1.71
CLIP1-206ENST00000535290 MT2AP02795 61 aa4.34□□□□□ -1.71
CLIP1-206ENST00000535290 CKS2P33552 79 aa4.34□□□□□ -1.71
CLIP1-206ENST00000535290 RIGQ13278 110 aa4.34□□□□□ -1.71
CLIP1-206ENST00000535290 C2orf66Q6UXQ4 117 aa4.34□□□□□ -1.71
CLIP1-206ENST00000535290 LINC01551Q86U37 167 aa4.34□□□□□ -1.71
CLIP1-206ENST00000535290 SMCR5Q8TEV8 140 aa4.34□□□□□ -1.71
CLIP1-206ENST00000535290 AMELXQ99217 191 aa4.34□□□□□ -1.71
CLIP1-206ENST00000535290 SMLR1H3BR10 107 aa4.33□□□□□ -1.72
CLIP1-206ENST00000535290 FAM19A3Q7Z5A8 133 aa4.33□□□□□ -1.72
CLIP1-206ENST00000535290 SMIM1B2RUZ4 78 aa4.32□□□□□ -1.72
CLIP1-206ENST00000535290 D6R8Y8 96 aa4.32□□□□□ -1.72
CLIP1-206ENST00000535290 KRTAP20-1Q3LI63 56 aa4.32□□□□□ -1.72
CLIP1-206ENST00000535290 KRTAP19-6Q3LI70 58 aa4.32□□□□□ -1.72
CLIP1-206ENST00000535290 COX7B2Q8TF08 81 aa4.32□□□□□ -1.72
CLIP1-206ENST00000535290 PCP4L1A6NKN8 68 aa4.31□□□□□ -1.72
CLIP1-206ENST00000535290 IGLV6-57P01721 117 aa4.31□□□□□ -1.72
CLIP1-206ENST00000535290 MT1FP04733 61 aa4.31□□□□□ -1.72
CLIP1-206ENST00000535290 RAB5AP20339 215 aa4.31□□□□□ -1.72
CLIP1-206ENST00000535290 PFN2P35080 140 aa4.31□□□□□ -1.72
CLIP1-206ENST00000535290 RAB14P61106 215 aa4.31□□□□□ -1.72
CLIP1-206ENST00000535290 RPL37P61927 97 aaKnown RBP4.31□□□□□ -1.72
CLIP1-206ENST00000535290 HERVK_113P63121 156 aa4.31□□□□□ -1.72
CLIP1-206ENST00000535290 ERASQ7Z444 233 aa4.31□□□□□ -1.72
CLIP1-206ENST00000535290 AKAP14Q86UN6 197 aa4.31□□□□□ -1.72
CLIP1-206ENST00000535290 SND1-IT1Q9HBX3 110 aa4.31□□□□□ -1.72
CLIP1-206ENST00000535290 IGLV5-39A0A0G2JS06 123 aa4.3□□□□□ -1.72
CLIP1-206ENST00000535290 TEX46H3BTG2 121 aa4.3□□□□□ -1.72
CLIP1-206ENST00000535290 RPL24P83731 157 aaKnown RBP4.3□□□□□ -1.72
CLIP1-206ENST00000535290 ZNF345Q14585 488 aa4.3□□□□□ -1.72
CLIP1-206ENST00000535290 TIMM17AQ99595 171 aa4.3□□□□□ -1.72
CLIP1-206ENST00000535290 LINC00846Q9NV44 126 aa4.3□□□□□ -1.72
CLIP1-206ENST00000535290 PDZD11Q5EBL8 140 aa4.29□□□□□ -1.72
CLIP1-206ENST00000535290 V9GYV3 84 aa4.29□□□□□ -1.72
CLIP1-206ENST00000535290 A0A0U1RRA0 63 aa4.28□□□□□ -1.72
CLIP1-206ENST00000535290 LOC389332A0A1B0GUA5 103 aa4.28□□□□□ -1.72
CLIP1-206ENST00000535290 KANTRA0A1W2PQU2 76 aa4.28□□□□□ -1.72
CLIP1-206ENST00000535290 IGIPA6NJ69 53 aa4.28□□□□□ -1.72
CLIP1-206ENST00000535290 ERC2-IT1O76042 136 aa4.28□□□□□ -1.72
CLIP1-206ENST00000535290 SEC11AP67812 179 aa4.28□□□□□ -1.72
CLIP1-206ENST00000535290 OSTCQ9NRP0 149 aa4.28□□□□□ -1.72
CLIP1-206ENST00000535290 CYSLTR1Q9Y271 337 aa4.28□□□□□ -1.72
CLIP1-206ENST00000535290 ATP5LO75964 103 aa4.27□□□□□ -1.73
CLIP1-206ENST00000535290 NAT8BQ9UHF3 227 aa4.27□□□□□ -1.73
CLIP1-206ENST00000535290 TMEM250H0YL14 139 aa4.26□□□□□ -1.73
CLIP1-206ENST00000535290 SPINK8P0C7L1 97 aa4.26□□□□□ -1.73
CLIP1-206ENST00000535290 SPRR1AP35321 89 aa4.26□□□□□ -1.73
CLIP1-206ENST00000535290 CEBPGP53567 150 aa4.26□□□□□ -1.73
CLIP1-206ENST00000535290 C9orf153Q5TBE3 101 aa4.26□□□□□ -1.73
CLIP1-206ENST00000535290 BATF3Q9NR55 127 aa4.26□□□□□ -1.73
CLIP1-206ENST00000535290 IGLV5-45A0A087WSX0 123 aa4.25□□□□□ -1.73
CLIP1-206ENST00000535290 PPBPP02775 128 aa4.25□□□□□ -1.73
CLIP1-206ENST00000535290 KRTAP10-10P60014 251 aa4.25□□□□□ -1.73
CLIP1-206ENST00000535290 FAM74A3Q4VXF1 159 aa4.25□□□□□ -1.73
CLIP1-206ENST00000535290 MUC12Q9UKN1 5478 aa4.25□□□□□ -1.73
CLIP1-206ENST00000535290 ERG28Q9UKR5 140 aa4.25□□□□□ -1.73
CLIP1-206ENST00000535290 ETDCA0A1B0GVM5 59 aa4.24□□□□□ -1.73
CLIP1-206ENST00000535290 HMSDA8MTL9 139 aa4.24□□□□□ -1.73
CLIP1-206ENST00000535290 HRCT1Q6UXD1 115 aa4.24□□□□□ -1.73
CLIP1-206ENST00000535290 TMEM136Q6ZRR5 245 aa4.24□□□□□ -1.73
CLIP1-206ENST00000535290 ORMDL3Q8N138 153 aa4.24□□□□□ -1.73
CLIP1-206ENST00000535290 PRELID3AQ96N28 172 aa4.24□□□□□ -1.73
CLIP1-206ENST00000535290 TINCRA0A1B0GVN0 87 aa4.23□□□□□ -1.73
CLIP1-206ENST00000535290 A0A1B0GW15 77 aa4.23□□□□□ -1.73
CLIP1-206ENST00000535290 MRPL54Q6P161 138 aaKnown RBP4.23□□□□□ -1.73
CLIP1-206ENST00000535290 SMIM7Q9BQ49 75 aa4.23□□□□□ -1.73
CLIP1-206ENST00000535290 LIMD2Q9BT23 127 aa4.23□□□□□ -1.73
CLIP1-206ENST00000535290 KCNQ1DNQ9H478 68 aa4.23□□□□□ -1.73
CLIP1-206ENST00000535290 SMIM27A0A1W2PRY6 76 aa4.22□□□□□ -1.73
CLIP1-206ENST00000535290 F8W036 122 aa4.22□□□□□ -1.73
CLIP1-206ENST00000535290 KIAA1644Q3SXP7 199 aa4.22□□□□□ -1.73
CLIP1-206ENST00000535290 ZNF625Q96I27 306 aaPredicted RBP4.22□□□□□ -1.73
CLIP1-206ENST00000535290 A0A1B0GXF2 115 aa4.21□□□□□ -1.74
CLIP1-206ENST00000535290 COX17Q14061 63 aa4.21□□□□□ -1.74
CLIP1-206ENST00000535290 Q8N8P6 123 aa4.21□□□□□ -1.74
CLIP1-206ENST00000535290 Q9BRP9 147 aa4.21□□□□□ -1.74
CLIP1-206ENST00000535290 SEC61GP60059 68 aa4.2□□□□□ -1.74
CLIP1-206ENST00000535290 ORMDL2Q53FV1 153 aa4.2□□□□□ -1.74
CLIP1-206ENST00000535290 MAP1LC3AQ9H492 121 aa4.2□□□□□ -1.74
CLIP1-206ENST00000535290 TRBV10-3A0A0K0K1G6 114 aa4.19□□□□□ -1.74
CLIP1-206ENST00000535290 C20orf202A1L168 122 aa4.19□□□□□ -1.74
CLIP1-206ENST00000535290 S100A8P05109 93 aa4.19□□□□□ -1.74
CLIP1-206ENST00000535290 ADCYAP1P18509 176 aa4.19□□□□□ -1.74
CLIP1-206ENST00000535290 TRAV9-1A0A075B6T8 112 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms