RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 H0YGX0 51 aa6.39□□□□□ -1.39
SF3B2-216ENST00000534765 NDUFA1O15239 70 aa6.39□□□□□ -1.39
SF3B2-216ENST00000534765 C6orf226Q5I0X4 101 aa6.39□□□□□ -1.39
SF3B2-216ENST00000534765 LYPD5Q6UWN5 251 aa6.39□□□□□ -1.39
SF3B2-216ENST00000534765 C19orf73Q9NVV2 129 aa6.39□□□□□ -1.39
SF3B2-216ENST00000534765 A0A096LPF7 62 aa6.38□□□□□ -1.39
SF3B2-216ENST00000534765 MRPS36P82909 103 aaKnown RBP6.38□□□□□ -1.39
SF3B2-216ENST00000534765 COX6A2Q02221 97 aa6.38□□□□□ -1.39
SF3B2-216ENST00000534765 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.38□□□□□ -1.39
SF3B2-216ENST00000534765 NOTCH1P46531 2555 aa6.38□□□□□ -1.39
SF3B2-216ENST00000534765 Q8N3U1 123 aa6.37□□□□□ -1.39
SF3B2-216ENST00000534765 KIF25-AS1Q9Y6Z4 181 aa6.37□□□□□ -1.39
SF3B2-216ENST00000534765 LINC00337Q8N6G1 96 aa6.37□□□□□ -1.39
SF3B2-216ENST00000534765 TM2D3Q9BRN9 247 aa6.37□□□□□ -1.39
SF3B2-216ENST00000534765 FAM229BQ4G0N7 80 aa6.36□□□□□ -1.39
SF3B2-216ENST00000534765 HUWE1Q7Z6Z7 4374 aaKnown RBP6.36□□□□□ -1.39
SF3B2-216ENST00000534765 TRBV10-1A0A0K0K1A3 114 aa6.36□□□□□ -1.39
SF3B2-216ENST00000534765 ESRGQ1W209 222 aa6.36□□□□□ -1.39
SF3B2-216ENST00000534765 LENEPQ9Y5L5 61 aa6.36□□□□□ -1.39
SF3B2-216ENST00000534765 Q6ZSN1 163 aa6.36□□□□□ -1.39
SF3B2-216ENST00000534765 JMJD7-PLA2G4BH0Y9G9 81 aa6.35□□□□□ -1.39
SF3B2-216ENST00000534765 ATP5EP2Q5VTU8 51 aa6.35□□□□□ -1.39
SF3B2-216ENST00000534765 NREPQ16612 68 aa6.35□□□□□ -1.39
SF3B2-216ENST00000534765 A8MTW9 85 aa6.34□□□□□ -1.39
SF3B2-216ENST00000534765 CLPSL2Q6UWE3 100 aa6.34□□□□□ -1.39
SF3B2-216ENST00000534765 Q8N9L7 120 aa6.34□□□□□ -1.39
SF3B2-216ENST00000534765 C11orf72Q8NBR9 251 aa6.34□□□□□ -1.39
SF3B2-216ENST00000534765 TRGV2A0A075B6R0 118 aa6.34□□□□□ -1.39
SF3B2-216ENST00000534765 C1orf158Q8N1D5 194 aa6.34□□□□□ -1.39
SF3B2-216ENST00000534765 TMEM254Q8TBM7 123 aa6.34□□□□□ -1.39
SF3B2-216ENST00000534765 LINC01600Q96MT4 127 aa6.34□□□□□ -1.39
SF3B2-216ENST00000534765 CELA1Q9UNI1 258 aa6.34□□□□□ -1.39
SF3B2-216ENST00000534765 TRGV1A0A0A0MS02 117 aa6.33□□□□□ -1.4
SF3B2-216ENST00000534765 TRBV6-5A0A0K0K1A5 114 aa6.33□□□□□ -1.4
SF3B2-216ENST00000534765 PRR3P79522 188 aaKnown RBP6.33□□□□□ -1.4
SF3B2-216ENST00000534765 IGLV1-51P01701 117 aa6.32□□□□□ -1.4
SF3B2-216ENST00000534765 DEFB130BP0DP73 79 aa6.32□□□□□ -1.4
SF3B2-216ENST00000534765 DEFB130AP0DP74 79 aa6.32□□□□□ -1.4
SF3B2-216ENST00000534765 MED14OSP0DP75 135 aa6.32□□□□□ -1.4
SF3B2-216ENST00000534765 IGHV4-28A0A0C4DH34 117 aa6.32□□□□□ -1.4
SF3B2-216ENST00000534765 NDUFC1O43677 76 aa6.32□□□□□ -1.4
SF3B2-216ENST00000534765 CD164Q04900 197 aa6.32□□□□□ -1.4
SF3B2-216ENST00000534765 PLAC8L1A1L4L8 177 aa6.31□□□□□ -1.4
SF3B2-216ENST00000534765 PRKDCP78527 4128 aaKnown RBP6.31□□□□□ -1.4
SF3B2-216ENST00000534765 C4orf48Q5BLP8 95 aa6.31□□□□□ -1.4
SF3B2-216ENST00000534765 TMEM256-PLSCR3K7ERE1 68 aa6.31□□□□□ -1.4
SF3B2-216ENST00000534765 CCL18P55774 89 aa6.31□□□□□ -1.4
SF3B2-216ENST00000534765 LINC01547P58512 204 aaPredicted RBP6.31□□□□□ -1.4
SF3B2-216ENST00000534765 CHKB-CPT1BH3BT56 60 aa6.31□□□□□ -1.4
SF3B2-216ENST00000534765 PRYO14603 147 aa6.3□□□□□ -1.4
SF3B2-216ENST00000534765 ATP5EP56381 51 aaPredicted RBP6.3□□□□□ -1.4
SF3B2-216ENST00000534765 BEAN1Q3B7T3 259 aa6.3□□□□□ -1.4
SF3B2-216ENST00000534765 KRTAP24-1Q3LI83 254 aa6.3□□□□□ -1.4
SF3B2-216ENST00000534765 HIGD2AQ9BW72 106 aa6.3□□□□□ -1.4
SF3B2-216ENST00000534765 BPY2O14599 106 aa6.3□□□□□ -1.4
SF3B2-216ENST00000534765 C22orf24Q9Y442 160 aa6.3□□□□□ -1.4
SF3B2-216ENST00000534765 SMIM1B2RUZ4 78 aa6.3□□□□□ -1.4
SF3B2-216ENST00000534765 PF4P02776 101 aa6.3□□□□□ -1.4
SF3B2-216ENST00000534765 LINC00242Q5T6M2 205 aa6.3□□□□□ -1.4
SF3B2-216ENST00000534765 CSNK1G2-AS1Q8NCQ2 148 aa6.3□□□□□ -1.4
SF3B2-216ENST00000534765 Q6ZVQ6 151 aa6.29□□□□□ -1.4
SF3B2-216ENST00000534765 DEFB4AO15263 64 aa6.29□□□□□ -1.4
SF3B2-216ENST00000534765 STHQ8IWL8 128 aa6.29□□□□□ -1.4
SF3B2-216ENST00000534765 FAM104AQ969W3 186 aa6.28□□□□□ -1.4
SF3B2-216ENST00000534765 FAM30AQ9NZY2 134 aa6.28□□□□□ -1.4
SF3B2-216ENST00000534765 KLKP1Q107X0 134 aa6.28□□□□□ -1.4
SF3B2-216ENST00000534765 DNAH9Q9NYC9 4486 aa6.28□□□□□ -1.4
SF3B2-216ENST00000534765 INSP01308 110 aa6.28□□□□□ -1.4
SF3B2-216ENST00000534765 C6orf99Q4VX62 202 aa6.28□□□□□ -1.4
SF3B2-216ENST00000534765 DNAH10Q8IVF4 4471 aa6.27□□□□□ -1.41
SF3B2-216ENST00000534765 DNAH1Q9P2D7 4330 aa6.27□□□□□ -1.41
SF3B2-216ENST00000534765 A8MUN3 132 aa6.26□□□□□ -1.41
SF3B2-216ENST00000534765 FAM19A3Q7Z5A8 133 aa6.26□□□□□ -1.41
SF3B2-216ENST00000534765 CHCHD7Q9BUK0 85 aa6.26□□□□□ -1.41
SF3B2-216ENST00000534765 IGKV2-28A0A075B6P5 120 aa6.26□□□□□ -1.41
SF3B2-216ENST00000534765 IGKV2D-28P01615 120 aa6.26□□□□□ -1.41
SF3B2-216ENST00000534765 M0R2N4 97 aa6.25□□□□□ -1.41
SF3B2-216ENST00000534765 NTM-AS1Q6ZSK4 140 aa6.25□□□□□ -1.41
SF3B2-216ENST00000534765 A6NED7 52 aa6.25□□□□□ -1.41
SF3B2-216ENST00000534765 ZNF561-AS1K7EIQ3 104 aa6.25□□□□□ -1.41
SF3B2-216ENST00000534765 RBM12B-AS1Q9P1G2 102 aa6.25□□□□□ -1.41
SF3B2-216ENST00000534765 TRGV4A0A0C4DH28 118 aa6.24□□□□□ -1.41
SF3B2-216ENST00000534765 KRTAP10-11P60412 298 aa6.24□□□□□ -1.41
SF3B2-216ENST00000534765 OXLD1Q5BKU9 147 aa6.24□□□□□ -1.41
SF3B2-216ENST00000534765 C11orf45Q8TAV5 145 aa6.24□□□□□ -1.41
SF3B2-216ENST00000534765 C6orf223Q8N319 242 aa6.24□□□□□ -1.41
SF3B2-216ENST00000534765 C3orf84H3BNL1 204 aa6.24□□□□□ -1.41
SF3B2-216ENST00000534765 Q6ZQY7 126 aa6.24□□□□□ -1.41
SF3B2-216ENST00000534765 Q8N814 137 aa6.24□□□□□ -1.41
SF3B2-216ENST00000534765 IGLV10-54A0A075B6I4 117 aa6.23□□□□□ -1.41
SF3B2-216ENST00000534765 LOC100131303A0A0U1RQF7 123 aa6.23□□□□□ -1.41
SF3B2-216ENST00000534765 APOC4P55056 127 aa6.23□□□□□ -1.41
SF3B2-216ENST00000534765 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.22□□□□□ -1.41
SF3B2-216ENST00000534765 MEGF8Q7Z7M0 2845 aa6.22□□□□□ -1.41
SF3B2-216ENST00000534765 PRR15LQ9BU68 103 aa6.22□□□□□ -1.41
SF3B2-216ENST00000534765 TENM2Q9NT68 2774 aa6.22□□□□□ -1.41
SF3B2-216ENST00000534765 H3BS24 57 aa6.21□□□□□ -1.41
SF3B2-216ENST00000534765 NOP10Q9NPE3 64 aaKnown RBP6.21□□□□□ -1.41
SF3B2-216ENST00000534765 UBE2BP63146 152 aa6.21□□□□□ -1.42
SF3B2-216ENST00000534765 DEFB105AQ8NG35 78 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms